Aspergillus saccharolyticus JOP 1030-1 v1.0
TRANSCRIPT ANNOTATION 
Aspsac1/scaffold_40:58909-60188 fgenesh1_kg.40_#_20_#_Locus7140v1rpkm6.24 Hide 
AttributeValueCreatorAction
Name  
Description  
Model Notes  
Deflinehypothetical proteinAUTOMATIC 
DispositionCatalogAUTOMATIC 
Literature  
Assessment
 ? 
NoteCreatorAction
EST evidence  
Needs GO  
EvidenceTypeCreatorAction
 

FUNCTIONAL (PROTEIN) ANNOTATION
User-Assigned Ontology       
ASPECT DETAILS
function
      
process
      
component
      
enzyme
      
kog
      
Automatic Ontology and Best Protein Alignments for transcript 360200
Automatic Ontology
ASPECT
GO/ECSUPPORTAction
function
3677  Interacting selectively with DNA (deoxyribonucleic acid).IPR000684  RNA polymerase II, heptapeptide repeat, eukaryotic 
process
6366  The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs).IPR000684  RNA polymerase II, heptapeptide repeat, eukaryotic 
component
5665  RNA polymerase II, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces mRNAs, snoRNAs, and some of the snRNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The largest subunit of RNA polymerase II contains an essential carboxyl-terminal domain (CTD) composed of a variable number of heptapeptide repeats (YSPTSPS). The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerases I and III. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template.IPR000684  RNA polymerase II, heptapeptide repeat, eukaryotic 

High Scoring Alignments 

gi|358368304|dbj|GAA84921.1|
similar to An16g03080 [Aspergillus kawachii IFO 4308]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
681
0.0
45%
95%
100%

gi|350633566|gb|EHA21931.1|
hypothetical protein ASPNIDRAFT_126465 [Aspergillus niger ATCC 1015]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
678
0.0
54%
97%
100%

gi|317036580|ref|XP_001397620.2|
hypothetical protein ANI_1_1616144 [Aspergillus niger CBS 513.88]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
678
0.0
54%
97%
100%

gi|134083165|emb|CAK48617.1|
hypothetical protein An16g03080 [Aspergillus niger]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
678
0.0
54%
69%
100%

afm:Afu3g09580
hypothetical protein  [ Aspergillus fumigatus Af293]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
591
0.0
51%
97%
100%

gi|317141340|ref|XP_003189361.1|
hypothetical protein AOR_1_3202174 [Aspergillus oryzae RIB40]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
553
0.0
38%
97%
97%

gi|238484409|ref|XP_002373443.1|
conserved hypothetical protein [Aspergillus flavus NRRL3357] >gi|220701493|gb|EED57831.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
553
0.0
38%
94%
97%

gi|255934430|ref|XP_002558394.1|
Pc12g15960 [Penicillium chrysogenum Wisconsin 54-1255] >gi|211583013|emb|CAP81223.1| Pc12g15960 [Penicillium chrysogenum Wisconsin 54-1255]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
542
7.3E-44
33%
96%
98%

gi|119492013|ref|XP_001263501.1|
hypothetical protein NFIA_067710 [Neosartorya fischeri NRRL 181] >gi|119411661|gb|EAW21604.1| conserved hypothetical protein [Neosartorya fischeri NRRL 181]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
537
0.0
35%
97%
100%

ani:AN3069.2
hypothetical protein  [ Aspergillus nidulans FGSC A4]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
500
0.0
49%
31%
88%