Skip To Main Content
JGI Home
Genome Portal
MycoCosm
PhycoCosm
Login
Lophiotrema nucula CBS 627.86 v1.0
Search
BLAST
Browse
Annotations
Gene Ontology
PFAM Domains
KEGG
KOG
Secondary Metabolism Clusters
CAZymes
Peptidases
Transporters
Transcription Factors
MCL Clusters
Synteny
Mitochondrion
Download
Info
Home
Status
HELP!
TRANSCRIPT ANNOTATION
Lopnu1/scaffold_10:640758-641464
gm1.5639_g
Hide
Attribute
Value
Creator
Action
Name
Description
Model Notes
Defline
expressed protein
AUTOMATIC
Disposition
Catalog
AUTOMATIC
Literature
Assessment
?
Note
Creator
Action
EST evidence
Needs GO
Evidence
Type
Creator
Action
FUNCTIONAL (PROTEIN) ANNOTATION
User-Assigned Ontology
ASPECT
DETAILS
function
 
 
process
 
 
component
 
 
enzyme
 
 
kog
 
 
Automatic Ontology and Best Protein Alignments for transcript 644726
Automatic Ontology
ASPECT
GO/EC
SUPPORT
Action
High Scoring Alignments
gi|189201407|ref|XP_001937040.1|
predicted protein [Pyrenophora tritici-repentis Pt-1C-BFP] >gi|187984139|gb|EDU49627.1| predicted protein [Pyrenophora tritici-repentis Pt-1C-BFP] [no tax name]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
518
2.88172E-9
47%
96%
98%
gi|330934576|ref|XP_003304602.1|
hypothetical protein PTT_17251 [Pyrenophora teres f. teres 0-1] >gi|311318671|gb|EFQ87287.1| hypothetical protein PTT_17251 [Pyrenophora teres f. teres 0-1] [no tax name]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
516
7.30821E-9
46%
96%
98%
gi|396474943|ref|XP_003839666.1|
hypothetical protein LEMA_P111060.1 [Leptosphaeria maculans JN3] >gi|312216236|emb|CBX96187.1| hypothetical protein LEMA_P111060.1 [Leptosphaeria maculans JN3] [no tax name]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
508
1.75008E-5
44%
95%
98%
gi|169619924|ref|XP_001803374.1|
hypothetical protein SNOG_13162 [Phaeosphaeria nodorum SN15] >gi|160703926|gb|EAT79489.2| hypothetical protein SNOG_13162 [Phaeosphaeria nodorum SN15] [no tax name]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
295
6.91906E-21
25%
92%
98%