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Phaeodactylum tricornutum CCAP 1055/1 v2.0
TRANSCRIPT ANNOTATION 
Phatr2/chr_4:356038-357711 estExt_Genewise1.C_chr_40071 Hide 
AttributeValueCreatorAction
Name  
DescriptionMembrane associated nitrate transporter responsible for the active transport of nitrate into the cell. This model has a high level of EST support under conditions of nitrate depletion. The pt genome contains six nitrate transporters. This model is phylogenetically most similar to a nitrtae transporter on scaffold 6 and is also related closely to nitrate transporters from C.fusiformis and Tp model 211471 and 4911.Andy Allen 
Model NotesModified by RPOtillar; was 'Nitrate transporterAndy Allen 
Defline  
DispositionCatalogAUTOMATIC 
Literature  
Assessment
 ? 
NoteCreatorAction
EST evidence  
Needs GO  
EvidenceTypeCreatorAction
 

FUNCTIONAL (PROTEIN) ANNOTATION
User-Assigned Ontology       
ASPECT DETAILS
function
      
process
      
component
      
enzyme
      
kog
      
Automatic Ontology and Best Protein Alignments for transcript 26029
Automatic Ontology
ASPECT
GO/ECSUPPORTAction
function
15103  Enables the directed movement of inorganic anions into, out of, within or between cells. Inorganic anions are atoms or small molecules with a negative charge which do not contain carbon in covalent linkage.IPR004737  Nitrate transporter 
5215  Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells.IPR007114  Major facilitator superfamily 
process
15698  The directed movement of inorganic anions into, out of, within or between cells. Inorganic anions are atoms or small molecules with a negative charge which do not contain carbon in covalent linkage.IPR004737  Nitrate transporter 
6810  The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells.IPR007114  Major facilitator superfamily 
component
16021  Penetrating at least one phospholipid bilayer of a membrane. Also refers to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence spans the membrane.IPR007114  Major facilitator superfamily 
 IPR004737  Nitrate transporter 
kog
KOG2533  Permease of the major facilitator superfamily
Carbohydrate transport and metabolism
  

High Scoring Alignments 

cme:CMG018C
nitrate transporter  [ Cyanidioschyzon merolae]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
837
0.0
42%
74%
88%

ath:At3g45060
F14D17.130; high-affinity nitrate transporter, putative  [ Arabidopsis thaliana]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
739
0.0
38%
78%
89%

ath:At5g60770
MAE1.3; high-affinity nitrate transporter ACH1 - like protein  [ Arabidopsis thaliana]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
736
0.0
37%
84%
93%

osa:P0421H07.27
putative high affinity nitrate transporter  [ Oryza sativa (japonica cultivar-group)]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
731
0.0
38%
83%
89%

ath:At5g60780
MAE1.4; high affinity nitrate transporter protein - like  [ Arabidopsis thaliana]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
730
0.0
37%
79%
89%

ath:At1g12940
F13K23.20; high-affinity nitrate transporter, putative  [ Arabidopsis thaliana]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
727
0.0
38%
85%
89%

ath:At1g08100
T6D22.18; high-affinity nitrate transporter (ACH2)  [ Arabidopsis thaliana]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
717
0.0
36%
85%
93%

ath:At1g08090
T6D22.17; high-affinity nitrate transporter (ACH1)  [ Arabidopsis thaliana]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
708
0.0
37%
80%
89%

ath:At5g14570
T15N1.60; high affinity nitrate transporter - like protein  [ Arabidopsis thaliana]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
616
0.0
36%
80%
80%

ani:AN0399.2
hypothetical protein  [ Aspergillus nidulans FGSC A4]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
605
0.0
31%
94%
85%