Pleurotus ostreatus PC15 v2.0
TRANSCRIPT ANNOTATION 
PleosPC15_2/scaffold_07:931306-932877 gw1.07.1342.1 Hide 
AttributeValueCreatorAction
Name  
Description  
Model Notes  
Defline  
DispositionCatalogAUTOMATIC 
Literature  
Assessment
 ? 
NoteCreatorAction
EST evidence  
Needs GO  
EvidenceTypeCreatorAction
 

FUNCTIONAL (PROTEIN) ANNOTATION
User-Assigned Ontology       
ASPECT DETAILS
function
      
process
      
component
      
enzyme
      
kog
      
Automatic Ontology and Best Protein Alignments for transcript 1019990
Automatic Ontology
ASPECT
GO/ECSUPPORTAction
function
3677  Interacting selectively with DNA (deoxyribonucleic acid).IPR000684  RNA polymerase II, heptapeptide repeat, eukaryotic 
process
6366  The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs).IPR000684  RNA polymerase II, heptapeptide repeat, eukaryotic 
component
5665  RNA polymerase II, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces mRNAs, snoRNAs, and some of the snRNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The largest subunit of RNA polymerase II contains an essential carboxyl-terminal domain (CTD) composed of a variable number of heptapeptide repeats (YSPTSPS). The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerases I and III. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template.IPR000684  RNA polymerase II, heptapeptide repeat, eukaryotic 

High Scoring Alignments 

gi|170090065|ref|XP_001876255.1|
predicted protein [Laccaria bicolor S238N-H82] >gi|164649515|gb|EDR13757.1| predicted protein [Laccaria bicolor S238N-H82]  [no tax name]

view alignment    view info
GO/EC Classification
Score
Evalue
% id
% target
% model
 
1020
0.0
42%
78%
90%

gi|169858281|ref|XP_001835786.1|
predicted protein [Coprinopsis cinerea okayama7#130] >gi|116503124|gb|EAU86019.1| predicted protein [Coprinopsis cinerea okayama7#130]  [no tax name]

view alignment    view info
GO/EC Classification
Score
Evalue
% id
% target
% model
 
867
0.0
35%
82%
93%

gi|169852450|ref|XP_001832909.1|
predicted protein [Coprinopsis cinerea okayama7#130] >gi|116506044|gb|EAU88939.1| predicted protein [Coprinopsis cinerea okayama7#130]  [no tax name]

view alignment    view info
GO/EC Classification
Score
Evalue
% id
% target
% model
 
555
1.57E-43
24%
82%
85%

gi|170090087|ref|XP_001876266.1|
predicted protein [Laccaria bicolor S238N-H82] >gi|164649526|gb|EDR13768.1| predicted protein [Laccaria bicolor S238N-H82]  [no tax name]

view alignment    view info
GO/EC Classification
Score
Evalue
% id
% target
% model
 
466
3.98784E-33
18%
81%
89%

gi|169846776|ref|XP_001830102.1|
predicted protein [Coprinopsis cinerea okayama7#130] >gi|116508872|gb|EAU91767.1| predicted protein [Coprinopsis cinerea okayama7#130]  [no tax name]

view alignment    view info
GO/EC Classification
Score
Evalue
% id
% target
% model
 
350
2.0384E-28
33%
72%
46%

gi|215462672|gb|EEB95060.1|
hypothetical protein MPER_06029 [Moniliophthora perniciosa FA553]  [no tax name]

view alignment    view info
GO/EC Classification
Score
Evalue
% id
% target
% model
 
244
3.98308E-14
33%
86%
26%

gi|169858540|ref|XP_001835915.1|
predicted protein [Coprinopsis cinerea okayama7#130] >gi|116503085|gb|EAU85980.1| predicted protein [Coprinopsis cinerea okayama7#130]  [no tax name]

view alignment    view info
GO/EC Classification
Score
Evalue
% id
% target
% model
 
192
8.09895E-11
10%
59%
69%

gi|215456287|gb|EEB92450.1|
hypothetical protein MPER_09038 [Moniliophthora perniciosa FA553]  [no tax name]

view alignment    view info
GO/EC Classification
Score
Evalue
% id
% target
% model
 
161
4.47576E-7
31%
61%
17%