Rhizophagus irregularis C2 v1.0
Please note that this organism is for archival use only. Please see the current Rhizophagus irregularis C2 site for the latest data and information.
TRANSCRIPT ANNOTATION  - annotation is DISABLED
RhiirC2/scaffold_407:36197-41971 fgenesh1_kg.407_#_4_#_ACTTGA_L001_R1_(paired)_contig_2899 Hide 
AttributeValueCreatorAction
Name  
Description  
Model Notes  
Deflineexpressed proteinAUTOMATIC 
DispositionCatalogAUTOMATIC 
Literature  
Assessment
 ? 
NoteCreatorAction
EST evidence  
Needs GO  
EvidenceTypeCreatorAction
 

FUNCTIONAL (PROTEIN) ANNOTATION
User-Assigned Ontology       
ASPECT DETAILS
function
      
process
      
component
      
enzyme
      
kog
      
Automatic Ontology and Best Protein Alignments for transcript 741923
Automatic Ontology
ASPECT
GO/ECSUPPORTAction
function
3677  Interacting selectively with DNA (deoxyribonucleic acid).IPR008921  DNA polymerase III clamp loader subunit, C-terminal 
5524  Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.IPR003594  ATP-binding region, ATPase-like 
8270  Interacting selectively with zinc (Zn) ions.IPR006025  Peptidase M, neutral zinc metallopeptidases, zinc-binding site 
process
6260  The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA.IPR008921  DNA polymerase III clamp loader subunit, C-terminal 
6508  The hydrolysis of a peptide bond or bonds within a protein.IPR006025  Peptidase M, neutral zinc metallopeptidases, zinc-binding site 
component
5634  A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.IPR008921  DNA polymerase III clamp loader subunit, C-terminal 

High Scoring Alignments 

gi|384492030|gb|EIE83226.1|
hypothetical protein RO3G_07931 [Rhizopus oryzae RA 99-880]  [Rhizopus delemar RA 99-880]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
2557
0.0
26%
99%
91%

gi|328771034|gb|EGF81075.1|
hypothetical protein BATDEDRAFT_24744 [Batrachochytrium dendrobatidis JAM81]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
2257
0.0
21%
98%
98%

gi|389744677|gb|EIM85859.1|
hypothetical protein STEHIDRAFT_98067 [Stereum hirsutum FP-91666 SS1]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
2222
0.0
21%
99%
99%

gi|375173232|gb|EFP91877.2|
hypothetical protein PGTG_18071 [Puccinia graminis f. sp. tritici CRL 75-36-700-3]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
2197
0.0
20%
98%
98%

gi|331247334|ref|XP_003336296.1|
hypothetical protein PGTG_18071 [Puccinia graminis f. sp. tritici CRL 75-36-700-3]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
2177
0.0
20%
97%
97%

gi|328857749|gb|EGG06864.1|
hypothetical protein MELLADRAFT_86295 [Melampsora larici-populina 98AG31]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
2150
0.0
19%
99%
99%

gi|395330080|gb|EJF62464.1|
hypothetical protein DICSQDRAFT_135429 [Dichomitus squalens LYAD-421 SS1]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
2141
0.0
19%
99%
99%

gi|390604432|gb|EIN13823.1|
hypothetical protein PUNSTDRAFT_117488 [Punctularia strigosozonata HHB-11173 SS5]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
2105
0.0
19%
99%
99%

gi|336372638|gb|EGO00977.1|
hypothetical protein SERLA73DRAFT_87350 [Serpula lacrymans var. lacrymans S7.3] >gi|336385466|gb|EGO26613.1| hypothetical protein SERLADRAFT_447770 [Serpula lacrymans var. lacrymans S7.9]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
2089
0.0
18%
99%
99%

gi|392567464|gb|EIW60639.1|
hypothetical protein TRAVEDRAFT_119941 [Trametes versicolor FP-101664 SS1]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
2072
0.0
18%
99%
99%