Phylum | Subphylum | Class | Organism | Protein Id | Location | Gene Length | Transcriptome Coverage % | Protein Length | Phenotype Link | PFAM Domains | User Annotations/Notes | Models Domains | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Ascomycota | Pezizomycotina | Eurotiomycetes | Aspergillus niger ATCC 1015 v4.0 | 1109762 | chr_601:896,157-898,348 | 2,192 | 643 | Description Zinc finger domains are nucleic acid-binding protein structures; they are composed of 25 to 30 amino-acid residues including 2 conserved Cys and 2 conserved His residues in a C-2-C-12-H-3-H type motif; a zinc finger motif is an unusually small, self-folding domain in which Zn is a crucial component of its tertiary structure; all bind 1 atom of Zn in a tetrahedral array to yield a finger-like projection, which interacts with nucleotides in the major groove of the nucleic acid; Zn binds to the conserved Cys and His residues. Monica Misra2006-09-28 | |||||
Ascomycota | Saccharomycotina | Saccharomycetes | Scheffersomyces stipitis NRRL Y-11545 v2.0 | 60913 | chr_5.1:1,382,905-1,384,719 | 1,815 | 605 | ||||||
Ascomycota | Pezizomycotina | Pezizomycetes | Tuber aestivum var. urcinatum v1.0 | 3429 | scaffold_192:74,945-72,358 | 2,588 | 612 | ||||||
Ascomycota | Pezizomycotina | Pezizomycetes | Tuber melanosporum Mel28 v1.2 | 415 | scaffold_102:249,315-251,268 | 1,954 | 613 | ||||||
Ascomycota | Pezizomycotina | Pezizomycetes | Tuber borchii Tbo3840 v1.0 | 1093049 | scaffold_304:69,654-67,160 | 2,495 | 612 | ||||||
Ascomycota | Pezizomycotina | Pezizomycetes | Tuber magnatum v1.0 | 353733 | scaffold_65:484,850-482,893 | 1,958 | 582 | ||||||
Ascomycota | Taphrinomycotina | Pneumocystomycetes | Pneumocystis jirovecii | 975 | contig_198:68-2,110 | 2,043 | 649 | Ankyrin repeat Ubiquitin interaction motif | |||||
Ascomycota | Pezizomycotina | Pezizomycetes | Ascodesmis nigricans CBS 389.68 v1.0 | 394311 | scaffold_3:896,483-898,570 | 2,088 | 632 | ||||||
Ascomycota | Pezizomycotina | Pezizomycetes | Tricharina praecox CBS 144465 v1.0 | 428763 | scaffold_4:93,779-91,641 | 2,139 | 630 | Ankyrin repeat | |||||
Ascomycota | Pezizomycotina | Pezizomycetes | Pyronema domesticum CBS 144463 v1.0 | 399790 | scaffold_4:742,643-740,512 | 2,132 | 589 | Ankyrin repeats (many copies) | |||||
Ascomycota | Pezizomycotina | Pezizomycetes | Pyronema omphalodes CBS 144459 v1.0 | 285424 | scaffold_51:192,303-194,549 | 2,247 | 592 | ||||||
Ascomycota | Pezizomycotina | Pezizomycetes | Pyronema confluens CBS100304 | 2458 | scaffold_146:11,405-13,540 | 2,136 | 589 | Ankyrin repeat | |||||
Ascomycota | Pezizomycotina | Pezizomycetes | Morchella snyderi CBS 144464 v1.0 | 573645 | scaffold_13:811,666-813,599 | 1,934 | 625 | ||||||
Ascomycota | Pezizomycotina | Pezizomycetes | Sarcoscypha coccinea ATCC 58028 v1.0 | 456980 | scaffold_80:140,967-143,351 | 2,385 | 624 | ||||||
Ascomycota | Pezizomycotina | Pezizomycetes | Geopyxis carbonaria CBS 144460 v1.0 | 96458 | scaffold_16:186,720-188,916 | 2,197 | 618 | ||||||
Ascomycota | Pezizomycotina | Pezizomycetes | Caloscypha fulgens ATCC 42695 v1.0 | 726975 | scaffold_19:160,554-158,605 | 1,950 | 612 | ||||||
Ascomycota | Taphrinomycotina | Archaeorhizomycetes | Archaeorhizomyces finlayi CBS 128710 v2.0 | 8647 | scaffold_80:4,710-9,567 | 4,858 | 602 | ||||||
Ascomycota | Taphrinomycotina | Archaeorhizomycetes | Archaeorhizomyces borealis CBS 138755 v1.0 | 1494 | scaffold_2269:72,774-70,819 | 1,956 | 585 | Ankyrin repeat | |||||
Ascomycota | Pezizomycotina | Pezizomycetes | Morchella importuna CCBAS932 v1.0 | 566621 | scaffold_39:395,054-392,449 | 2,606 | 669 | ||||||
Ascomycota | Pezizomycotina | Pezizomycetes | Gyromitra esculenta CBS101906 v1.0 | 566815 | scaffold_52:218,871-216,562 | 2,310 | 617 | ||||||
Ascomycota | Pezizomycotina | Pezizomycetes | Choiromyces venosus 120613-1 v1.0 | 1825403 | scaffold_4:1,207,055-1,205,103 | 1,953 | 613 | ||||||
Ascomycota | Saccharomycotina | Saccharomycetes | Kuraishia capsulata CBS 1993 | 2396 | scaffold_3:312,153-310,333 | 1,821 | 607 | ||||||
Ascomycota | Saccharomycotina | Saccharomycetes | Debaryomyces hansenii CBS 767 | 4281 | Deha2F_6:564,498-566,402 | 1,905 | 635 | ||||||
Ascomycota | Taphrinomycotina | Saitoella complicata NRRL Y-17804 v1.0 | 33649 | scaffold_4:268,137-266,276 | 1,862 | 604 | |||||||
Ascomycota | Pezizomycotina | Orbiliomycetes | Arthrobotrys oligospora ATCC 24927 | 8390 | scaffold_00112:24,474-22,921 | 1,554 | 518 |
Please use this text box to state your intention to characterize this gene, to describe the methodology used, and to share the results of your work, e.g.:
After submission, notes are reviewed by the JGI and will become publicly visible upon approval.