Conserved Genes Families of Unknown Function
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PhylumSubphylumClassOrganismProtein IdLocationGene LengthTranscriptome Coverage %Protein LengthPhenotype LinkPFAM DomainsUser Annotations/Notes
Models
Domains
AscomycotaPezizomycotinaEurotiomycetesAspergillus niger ATCC 1015 v4.01109762chr_601:896,157-898,3482,192643
Description
Zinc finger domains are nucleic acid-binding protein structures; they are composed of 25 to 30 amino-acid residues including 2 conserved Cys and 2 conserved His residues in a C-2-C-12-H-3-H type motif; a zinc finger motif is an unusually small, self-folding domain in which Zn is a crucial component of its tertiary structure; all bind 1 atom of Zn in a tetrahedral array to yield a finger-like projection, which interacts with nucleotides in the major groove of the nucleic acid; Zn binds to the conserved Cys and His residues.
Monica Misra
2006-09-28
4949932,05017627
AscomycotaSaccharomycotinaSaccharomycetesScheffersomyces stipitis NRRL Y-11545 v2.060913chr_5.1:1,382,905-1,384,7191,8156051,815605
AscomycotaPezizomycotinaPezizomycetesTuber aestivum var. urcinatum v1.03429scaffold_192:74,945-72,3582,5886125345345627353456273581,6671492508
AscomycotaPezizomycotinaPezizomycetesTuber melanosporum Mel28 v1.2415scaffold_102:249,315-251,2681,9546134040572734057273581,5261492509
AscomycotaPezizomycotinaPezizomycetesTuber borchii Tbo3840 v1.01093049scaffold_304:69,654-67,1602,4956123833835727338357273581,7241492508
AscomycotaPezizomycotinaPezizomycetesTuber magnatum v1.0353733scaffold_65:484,850-482,8931,9585824040562734056273581,0314056273581,031984021492344134
AscomycotaTaphrinomycotinaPneumocystomycetesPneumocystis jirovecii975contig_198:68-2,1102,043649Ankyrin repeat Ubiquitin interaction motif4604605252446052524449631541753212.6e-053.3e+001.0e-02
AscomycotaPezizomycotinaPezizomycetesAscodesmis nigricans CBS 389.68 v1.0394311scaffold_3:896,483-898,5702,0886321431435027614350276541,5651993522
AscomycotaPezizomycotinaPezizomycetesTricharina praecox CBS 144465 v1.0428763scaffold_4:93,779-91,6412,139630Ankyrin repeat143143541,942246074.8e-05
AscomycotaPezizomycotinaPezizomycetesPyronema domesticum CBS 144463 v1.0399790scaffold_4:742,643-740,5122,132589Ankyrin repeats (many copies)2802805828228058282671,44518954781.2e-06
AscomycotaPezizomycotinaPezizomycetesPyronema omphalodes CBS 144459 v1.0285424scaffold_51:192,303-194,5492,2475922542545528225455282661,5901895481
AscomycotaPezizomycotinaPezizomycetesPyronema confluens CBS1003042458scaffold_146:11,405-13,5402,136589Ankyrin repeat2445224452582822445258282671,43318954787.0e-06
AscomycotaPezizomycotinaPezizomycetesMorchella snyderi CBS 144464 v1.0573645scaffold_13:811,666-813,5991,9346254343591,83215611
AscomycotaPezizomycotinaPezizomycetesSarcoscypha coccinea ATCC 58028 v1.0456980scaffold_80:140,967-143,3512,3856249292502709250270451,9281491521
AscomycotaPezizomycotinaPezizomycetesGeopyxis carbonaria CBS 144460 v1.096458scaffold_16:186,720-188,9162,197618193193591,94521598
AscomycotaPezizomycotinaPezizomycetesCaloscypha fulgens ATCC 42695 v1.0726975scaffold_19:160,554-158,6051,9506124343552784355278591,5151593505
AscomycotaTaphrinomycotinaArchaeorhizomycetesArchaeorhizomyces finlayi CBS 128710 v2.08647scaffold_80:4,710-9,5674,8586023133133271631332716312,27931332716312,279351,452105239259
AscomycotaTaphrinomycotinaArchaeorhizomycetesArchaeorhizomyces borealis CBS 138755 v1.01494scaffold_2269:72,774-70,8191,956585Ankyrin repeat3643642968336429683268541072282519.6e-05
AscomycotaPezizomycotinaPezizomycetesMorchella importuna CCBAS932 v1.0566621scaffold_39:395,054-392,4492,606669398398581,801398581,80110750398581,8011075079113156011838
AscomycotaPezizomycotinaPezizomycetesGyromitra esculenta CBS101906 v1.0566815scaffold_52:218,871-216,5622,310617165165712,07414604
AscomycotaPezizomycotinaPezizomycetesChoiromyces venosus 120613-1 v1.01825403scaffold_4:1,207,055-1,205,1031,9536134040562734056273581,5261492509
AscomycotaSaccharomycotinaSaccharomycetesKuraishia capsulata CBS 19932396scaffold_3:312,153-310,3331,8216071,821607
AscomycotaSaccharomycotinaSaccharomycetesDebaryomyces hansenii CBS 7674281Deha2F_6:564,498-566,4021,9056351,905635
AscomycotaTaphrinomycotinaSaitoella complicata NRRL Y-17804 v1.033649scaffold_4:268,137-266,2761,862604319319501,493107498
AscomycotaPezizomycotinaOrbiliomycetesArthrobotrys oligospora ATCC 249278390scaffold_00112:24,474-22,9211,5545181,554518