Peptidases • Rhodosporidium toruloides ATCC26217 v1.0
Annotations/GenomesHetpy1Hyabl1Leucr1Mereb1Micvi1Rhoba1_1Rhoto1Rhoto_ATCC26217_1Spopa1Sporo1TotalAnnotation Description
Merops
1721812302911901851831721801581,942
1212143016101191511140Water nucleophile; water bound by two Asp from monomer or dimer; all endopeptidases, from eukaryote organisms, viruses or virus-like organisms
11Water nucleophile; water bound by two Asp; all membrane-bound endopeptidases known only from eubacteria with active site on periplasmic side of cell membrane.
112222322219Water nucleophile; water bound by two Asp; all membrane-bound endopeptidases known only from eubacteria with active site on cytoplasmic side of cell membrane.
22212019112016141416173Cysteine nucleophile; catalytic residues in the order Cys, His, Asn (or Asp) in sequence
332322222223Cysteine nucleophile; catalytic residues in the order His, Cys in sequence
1221118Cysteine nucleophile; catalytic residues in the order His, Glu (or Asp), Cys in sequence
11111117Cysteine nucleophile; catalytic residues in the order Glu, Cys, His in sequence
1113Cysteine nucleophile; catalytic residues in the order His, Cys in sequence
222323213323Families of peptidase inhibitors not assigned to clans
11
111115
112
11
222623312124
11111122111Families of metallopeptidases not assigned to clans
6891013106581085Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HEXXH) and Glu, His or Asp
11111117Water nucleophile; water bound by single zinc ion ligated to His, Glu (within the motif HXXE) and His
11237Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HXXEH) and Glu
111111111110Water nucleophile; water bound by two zinc ions ligated by Lys, Asp, Asp, Asp, Glu
777877777771Water nucleophile; water bound by two cobalt or manganese ions ligated by Asp, Asp, His, Glu, Glu
8816131111131399111Water nucleophile; water bound by two zinc ions ligated by His (or Asp), Asp, Glu, Asp (or Glu), His
6614139101312108101Water nucleophile; water bound by two zinc ions ligated by His, His or Asp, Lys or Glu, His, His.
111111118Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HEXXH) and Asp; membrane proteins with intramembrane active site.
465557566554Water nucleophile; water bound by single zinc ion ligated to two His and Asp (within the motif HSHP(X)9D)
112Asparagine nucleophile; catalytic residues in the order Asp, Asn in sequence; all self-processing endopeptidases
112Serine or cysteine nucleophile; catalytic residues in the order His, Asp, Ser (or Cys) in sequence; all endopeptidases
18191824191819182118192Threonine, serine or cysteine nucleophile at the N-terminus of mature enzyme
224432232327Serine or cysteine nucleophile; catalytic residues in the order Cys (or Ser), His, Glu in sequence.
334241134227Serine nucleophile; catalytic residues in the order Asp, His, Ser in sequence in family S8, but family S53 differs
444971105594749454333545Serine nucleophile; catalytic residues in the order Ser, Asp, His in sequence
228823433136Serine nucleophile; catalytic residues in the order Ser, Lys (within the motif SXXK) in sequence
334435335437Serine nucleophile; catalytic residues in the order Ser, Lys (or His) in sequence
112211222115Serine nucleophile; catalytic residues in the order Ser, His, Asp in sequence
224424331227Serine nucleophile; transmembrane protein with catalytic residues in the order Ser, His embedded in the membrane
111111111110
13121013111112121014118
11
2114
11
123