Peptidases • Rhodosporidium toruloides IFO0880 v4.0
Annotations/GenomesRhoba1_1RhodotJ31_1Rhoglu1Rhomuc1Rhoto1Rhoto1_APA2687_1Rhoto_ATCC26217_1Rhoto_IFO0559_1Rhoto_IFO0880_4Rhoto_IFO1236_1TotalAnnotation Description
Merops
1851631801691831811721771851751,770
1089811109111212100Water nucleophile; water bound by two Asp from monomer or dimer; all endopeptidases, from eukaryote organisms, viruses or virus-like organisms
222233223324Water nucleophile; water bound by two Asp; all membrane-bound endopeptidases known only from eubacteria with active site on cytoplasmic side of cell membrane.
20151617161614151819166Cysteine nucleophile; catalytic residues in the order Cys, His, Asn (or Asp) in sequence
222222222220Cysteine nucleophile; catalytic residues in the order His, Cys in sequence
1121117Cysteine nucleophile; catalytic residues in the order His, Glu (or Asp), Cys in sequence
111111111110Cysteine nucleophile; catalytic residues in the order Glu, Cys, His in sequence
112Cysteine nucleophile; catalytic residues in the order His, Cys in sequence
322322122221Families of peptidase inhibitors not assigned to clans
11
1111116
11
322232133223
112122222217Families of metallopeptidases not assigned to clans
1086667566767Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HEXXH) and Glu, His or Asp
112Water nucleophile; water bound by single zinc ion ligated to His, Glu (within the motif HXXE) and His
112Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HXXEH) and Glu
111111111110Water nucleophile; water bound by two zinc ions ligated by Lys, Asp, Asp, Asp, Glu
777677777769Water nucleophile; water bound by two cobalt or manganese ions ligated by Asp, Asp, His, Glu, Glu
11913913121311149114Water nucleophile; water bound by two zinc ions ligated by His (or Asp), Asp, Glu, Asp (or Glu), His
1010119131112141110111Water nucleophile; water bound by two zinc ions ligated by His, His or Asp, Lys or Glu, His, His.
111115Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HEXXH) and Asp; membrane proteins with intramembrane active site.
766655655556Water nucleophile; water bound by single zinc ion ligated to two His and Asp (within the motif HSHP(X)9D)
18181720191918191918185Threonine, serine or cysteine nucleophile at the N-terminus of mature enzyme
222222322221Serine or cysteine nucleophile; catalytic residues in the order Cys (or Ser), His, Glu in sequence.
111111311112Serine nucleophile; catalytic residues in the order Asp, His, Ser in sequence in family S8, but family S53 differs
47435245495245495048480Serine nucleophile; catalytic residues in the order Ser, Asp, His in sequence
344443324132Serine nucleophile; catalytic residues in the order Ser, Lys (within the motif SXXK) in sequence
543433323232Serine nucleophile; catalytic residues in the order Ser, Lys (or His) in sequence
122222222219Serine nucleophile; catalytic residues in the order Ser, His, Asp in sequence
423133333328Serine nucleophile; transmembrane protein with catalytic residues in the order Ser, His embedded in the membrane
111111111110
11111211121112121114117