Due to a planned NERSC power outage, JGI portals will be unavailable 6:00am PDT July 10 - 11:59pm PDT July 14. System Status updates available here.
Peptidases • Mycotypha indica IMI 211999 v1.0
Annotations/GenomesAmyrou1Blatri1Blatri_F921_1Cokrec1Ellano2Gilper1Helpul1Kircor1Mucci2Mucmuc1Mycafr1Mycind1Parpar1Pilano1Rhimi_ATCC52814_1Rhior3Spoumb1TotalAnnotation Description
Merops
3022512542472932642793673043012332252652612322902554,623
3018192123242136242516151919203332395Water nucleophile; water bound by two Asp from monomer or dimer; all endopeptidases, from eukaryote organisms, viruses or virus-like organisms
11Water nucleophile; water bound by two Asp; all membrane-bound endopeptidases known only from eubacteria with active site on periplasmic side of cell membrane.
3333337446343444465Water nucleophile; water bound by two Asp; all membrane-bound endopeptidases known only from eubacteria with active site on cytoplasmic side of cell membrane.
3426262232263036353123263030282824487Cysteine nucleophile; catalytic residues in the order Cys, His, Asn (or Asp) in sequence
7556766665675564597Cysteine nucleophile; catalytic residues in the order His, Cys in sequence
32213332222241133Cysteine nucleophile; catalytic residues in the order His, Glu (or Asp), Cys in sequence
211211111111115Cysteine nucleophile; catalytic residues in the order Cys, His, His in sequence
3112222212111212228Cysteine nucleophile; catalytic residues in the order His, Cys in sequence
1135776797833777135115Families of peptidase inhibitors not assigned to clans
111111118
1121117
1111116
891330
22213211111112122
1221222522223312135
1111111111111114Families of metallopeptidases not assigned to clans
1923221723171919232315122020151818323Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HEXXH) and Glu, His or Asp
111115Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HXXEH) and Glu
4444444445444444469Water nucleophile; water bound by two zinc ions ligated by Lys, Asp, Asp, Asp, Glu
13111091212141213101213121212139199Water nucleophile; water bound by two cobalt or manganese ions ligated by Asp, Asp, His, Glu, Glu
1677811810151111991010101612180Water nucleophile; water bound by two zinc ions ligated by His (or Asp), Asp, Glu, Asp (or Glu), His
555587681277777446110Water nucleophile; water bound by two zinc ions ligated by His, His or Asp, Lys or Glu, His, His.
1112211321111111122Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HEXXH) and Asp; membrane proteins with intramembrane active site.
6444455765445566484Water nucleophile; water bound by single zinc ion ligated to two His and Asp (within the motif HSHP(X)9D)
11Water nucleophile; water bound by two cobalt ions ligated by Glu, Glu, His, His, Asp
112Asparagine nucleophile; catalytic residues in the order Asp, Asn in sequence; all self-processing endopeptidases
122232312213211129Serine or cysteine nucleophile; catalytic residues in the order His, Asp, Ser (or Cys) in sequence; all endopeptidases
3218172124162036231919212119193223380Threonine, serine or cysteine nucleophile at the N-terminus of mature enzyme
44443321035333423262Serine or cysteine nucleophile; catalytic residues in the order Cys (or Ser), His, Glu in sequence.
111115Serine or threonine nucleophile; N-terminal nucleophile
17151891011111210218611781811203Serine nucleophile; catalytic residues in the order Asp, His, Ser in sequence in family S8, but family S53 differs
59505160655170926766494761574853571,003Serine nucleophile; catalytic residues in the order Ser, Asp, His in sequence
1111221121112118Serine nucleophile; catalytic residues in the order Ser, Lys (within the motif SXXK) in sequence
3443446556547752478Serine nucleophile; catalytic residues in the order Ser, Lys (or His) in sequence
11Serine nucleophile; catalytic residues in the order Ser, Lys in sequence
1221211131221121125Serine nucleophile; catalytic residues in the order Ser, His, Asp in sequence
5125664877674544485Serine nucleophile; transmembrane protein with catalytic residues in the order Ser, His embedded in the membrane
111115Families of peptidases of unknown catalytic mechanism not assigned to clans
11111131111111117
2022211825201924242225192018172321358
11