Peptidases • Rhodosporidium diobovatum 08-225 v1.0
Annotations/GenomesAgahy1Hetpy1Mellp1Pucst1Rhodia1_1RhodotJ31_1Rhoglu1Rhosp1Rhoto1Rhoto_ATCC26217_1Rhoto_IFO0559_1Rhoto_IFO0880_4Rhoto_IFO1236_1Schco3TotalAnnotation Description
Merops
1781722241691631801651831721771851753452,488
111214689911911121229153Water nucleophile; water bound by two Asp from monomer or dimer; all endopeptidases, from eukaryote organisms, viruses or virus-like organisms
11Water nucleophile; water bound by two Asp; all membrane-bound endopeptidases known only from eubacteria with active site on periplasmic side of cell membrane.
212322232233229Water nucleophile; water bound by two Asp; all membrane-bound endopeptidases known only from eubacteria with active site on cytoplasmic side of cell membrane.
20222217151615161415181920229Cysteine nucleophile; catalytic residues in the order Cys, His, Asn (or Asp) in sequence
333222222222532Cysteine nucleophile; catalytic residues in the order His, Cys in sequence
1112111210Cysteine nucleophile; catalytic residues in the order His, Glu (or Asp), Cys in sequence
1111111111111Cysteine nucleophile; catalytic residues in the order Glu, Cys, His in sequence
11Water nucleophile; water bound by Gln and Glu; all endopeptidases
322222221222226Families of peptidase inhibitors not assigned to clans
11111117
112
123
223222231332734
11112122222320Families of metallopeptidases not assigned to clans
1061178676566722107Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HEXXH) and Glu, His or Asp
211228Water nucleophile; water bound by single zinc ion ligated to His, Glu (within the motif HXXE) and His
113117Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HXXEH) and Glu
112111111111215Water nucleophile; water bound by two zinc ions ligated by Lys, Asp, Asp, Asp, Glu
6777777777771093Water nucleophile; water bound by two cobalt or manganese ions ligated by Asp, Asp, His, Glu, Glu
881413913913131114923157Water nucleophile; water bound by two zinc ions ligated by His (or Asp), Asp, Glu, Asp (or Glu), His
56910101110131214111012133Water nucleophile; water bound by two zinc ions ligated by His, His or Asp, Lys or Glu, His, His.
111111111110Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HEXXH) and Asp; membrane proteins with intramembrane active site.
645666556555569Water nucleophile; water bound by single zinc ion ligated to two His and Asp (within the motif HSHP(X)9D)
1113Asparagine nucleophile; catalytic residues in the order Asp, Asn in sequence; all self-processing endopeptidases
11Asparagine nucleophile; all self-processing endopeptidases
11Serine or cysteine nucleophile; catalytic residues in the order His, Asp, Ser (or Cys) in sequence; all endopeptidases
19182620181717191819191822250Threonine, serine or cysteine nucleophile at the N-terminus of mature enzyme
322222223222733Serine or cysteine nucleophile; catalytic residues in the order Cys (or Ser), His, Glu in sequence.
112Serine or threonine nucleophile; N-terminal nucleophile
2316111113111638Serine nucleophile; catalytic residues in the order Asp, His, Ser in sequence in family S8, but family S53 differs
464452444352424945495048132696Serine nucleophile; catalytic residues in the order Ser, Asp, His in sequence
22144443241334Serine nucleophile; catalytic residues in the order Ser, Lys (within the motif SXXK) in sequence
332343333232337Serine nucleophile; catalytic residues in the order Ser, Lys (or His) in sequence
11Serine nucleophile; catalytic residues in the order Ser, Lys in sequence
12122222222121Serine nucleophile; catalytic residues in the order Ser, His, Asp in sequence
11Serine nucleophile; catalytic residues in the order His, Ser within the motif HXS.
321223333333435Serine nucleophile; transmembrane protein with catalytic residues in the order Ser, His embedded in the membrane
11111111111112
12131810111214121212111412163
22
11