Peptidases • Clitocybe gibba IJFM A808 v1.0
Annotations/GenomesCligib1Lacam2Lacbi2Lepnud1Mycgal1Panst_KUC8834_1_1Panst_LUM_1_1Ricfib1Ricmel1Trima3TotalAnnotation Description
Merops
4503243383651,0514654793433482764,439
583032151155839566029492Water nucleophile; water bound by two Asp from monomer or dimer; all endopeptidases, from eukaryote organisms, viruses or virus-like organisms
22Water nucleophile; water bound by two Asp; all membrane-bound endopeptidases known only from eubacteria with active site on periplasmic side of cell membrane.
1222101122225Water nucleophile; water bound by two Asp; all membrane-bound endopeptidases known only from eubacteria with active site on cytoplasmic side of cell membrane.
19162918462726181514228Cysteine nucleophile; catalytic residues in the order Cys, His, Asn (or Asp) in sequence
10494219788484Cysteine nucleophile; catalytic residues in the order His, Cys in sequence
631121112826Cysteine nucleophile; catalytic residues in the order His, Glu (or Asp), Cys in sequence
1857122Water nucleophile; water bound by Gln and Glu; all endopeptidases
171011335533363Families of peptidase inhibitors not assigned to clans
8181844
1113
12222111113
432362344334
2333133322236Families of metallopeptidases not assigned to clans
37181741341919161217230Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HEXXH) and Glu, His or Asp
1113332115Water nucleophile; water bound by single zinc ion ligated to His, Glu (within the motif HXXE) and His
1411131416Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HXXEH) and Glu
234111112117Water nucleophile; water bound by two zinc ions ligated by Lys, Asp, Asp, Asp, Glu
111112151410910108110Water nucleophile; water bound by two cobalt or manganese ions ligated by Asp, Asp, His, Glu, Glu
18101620502120121114192Water nucleophile; water bound by two zinc ions ligated by His (or Asp), Asp, Glu, Asp (or Glu), His
158912291816171212148Water nucleophile; water bound by two zinc ions ligated by His, His or Asp, Lys or Glu, His, His.
111111111110Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HEXXH) and Asp; membrane proteins with intramembrane active site.
111113Water nucleophile; water bound by single zinc ion ligated to two His and Asp (within the motifs HXXXD and HXH)
5595196855673Water nucleophile; water bound by single zinc ion ligated to two His and Asp (within the motif HSHP(X)9D)
11Water nucleophile; water bound by single zinc ion ligated to Asp, His and His.
1214Asparagine nucleophile; catalytic residues in the order Asp, Asn in sequence; all self-processing endopeptidases
21115Serine or cysteine nucleophile; catalytic residues in the order His, Asp, Ser (or Cys) in sequence; all endopeptidases
26212319512326212127258Threonine, serine or cysteine nucleophile at the N-terminus of mature enzyme
212127125643467Serine or cysteine nucleophile; catalytic residues in the order Cys (or Ser), His, Glu in sequence.
211116Serine or threonine nucleophile; N-terminal nucleophile
10101016105293618165255Serine nucleophile; catalytic residues in the order Asp, His, Ser in sequence in family S8, but family S53 differs
1427874132414178205100108771,508Serine nucleophile; catalytic residues in the order Ser, Asp, His in sequence
2052133988331102Serine nucleophile; catalytic residues in the order Ser, Lys (within the motif SXXK) in sequence
334353355337Serine nucleophile; catalytic residues in the order Ser, Lys (or His) in sequence
2114Serine nucleophile; catalytic residues in the order Ser, Lys in sequence
111111111110Serine nucleophile; catalytic residues in the order Ser, His, Asp in sequence
11Serine nucleophile; catalytic residues in the order Ser, Glu, His
446444533441Serine nucleophile; transmembrane protein with catalytic residues in the order Ser, His embedded in the membrane
111115Families of peptidases of unknown catalytic mechanism not assigned to clans
111111111110
20372115181211223520211
11
56617