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Peptidases • Gremmeniella abietina DAOM 170408 v1.0
Annotations/GenomesAcema1Cadsp1Greab1Leptod1Lorju1Lorma1Marbr1Phisc1TotalAnnotation Description
Merops
5627253266574124142466483,990
3431173335321041233Water nucleophile; water bound by two Asp from monomer or dimer; all endopeptidases, from eukaryote organisms, viruses or virus-like organisms
11Water nucleophile; water bound by two Asp; all membrane-bound endopeptidases known only from eubacteria with active site on periplasmic side of cell membrane.
1417917910817101Water nucleophile; water bound by two Asp; all membrane-bound endopeptidases known only from eubacteria with active site on cytoplasmic side of cell membrane.
2937243421242326218Cysteine nucleophile; catalytic residues in the order Cys, His, Asn (or Asp) in sequence
4344443430Cysteine nucleophile; catalytic residues in the order His, Cys in sequence
2114531219Cysteine nucleophile; catalytic residues in the order His, Glu (or Asp), Cys in sequence
2511121316Cysteine nucleophile; catalytic residues in the order Glu, Cys, His in sequence
1124Cysteine nucleophile; catalytic residues in the order Cys, His, His in sequence
1111116Cysteine nucleophile; catalytic residues in the order His, Cys in sequence
7435532837Water nucleophile; water bound by Gln and Glu; all endopeptidases
11Water nucleophile; water bound by Glu; all self-cleaving endopeptidases
4555554538Families of peptidase inhibitors not assigned to clans
11
213
111222211
6734543537
112
710410662752Families of metallopeptidases not assigned to clans
1633102815141621153Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HEXXH) and Glu, His or Asp
1222112112Water nucleophile; water bound by single zinc ion ligated to His, Glu (within the motif HXXE) and His
111111219Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HXXEH) and Glu
10119109941274Water nucleophile; water bound by two cobalt or manganese ions ligated by Asp, Asp, His, Glu, Glu
3441244027261841251Water nucleophile; water bound by two zinc ions ligated by His (or Asp), Asp, Glu, Asp (or Glu), His
19258231011926131Water nucleophile; water bound by two zinc ions ligated by His, His or Asp, Lys or Glu, His, His.
1113Water nucleophile; water bound by single zinc ion ligated to two His and Asp (within the motifs HXXXD and HXH)
4443443430Water nucleophile; water bound by single zinc ion ligated to two His and Asp (within the motif HSHP(X)9D)
111111118Water nucleophile; water bound by single zinc ion ligated to Asp, His and His.
2715223325Serine or cysteine nucleophile; catalytic residues in the order His, Asp, Ser (or Cys) in sequence; all endopeptidases
2427232526252126197Threonine, serine or cysteine nucleophile at the N-terminus of mature enzyme
613213633652Serine or cysteine nucleophile; catalytic residues in the order Cys (or Ser), His, Glu in sequence.
421111111Serine or threonine nucleophile; N-terminal nucleophile
3540184222261234229Serine nucleophile; catalytic residues in the order Asp, His, Ser in sequence in family S8, but family S53 differs
238315119283147157692951,623Serine nucleophile; catalytic residues in the order Ser, Asp, His in sequence
1830526159223128Serine nucleophile; catalytic residues in the order Ser, Lys (within the motif SXXK) in sequence
3333332323Serine nucleophile; catalytic residues in the order Ser, Lys (or His) in sequence
2121111110Serine nucleophile; catalytic residues in the order Ser, His, Asp in sequence
2215Serine nucleophile; catalytic residues in the order Ser, Glu, His
6323344227Serine nucleophile; transmembrane protein with catalytic residues in the order Ser, His embedded in the membrane
112116Families of peptidases of unknown catalytic mechanism not assigned to clans
111111118
1830131713141115131
22127
541533627