Peptidases • Naiadella fluitans ATCC 64713 v1.0
Annotations/GenomesAgahy1Hetpy1Naifl1Rhomi1Spoli1Trisp1TotalAnnotation Description
Merops
1781723031872141741,228
11123514257104Water nucleophile; water bound by two Asp from monomer or dimer; all endopeptidases, from eukaryote organisms, viruses or virus-like organisms
21233112Water nucleophile; water bound by two Asp; all membrane-bound endopeptidases known only from eubacteria with active site on cytoplasmic side of cell membrane.
202221132417117Cysteine nucleophile; catalytic residues in the order Cys, His, Asn (or Asp) in sequence
33432217Cysteine nucleophile; catalytic residues in the order His, Cys in sequence
11215Cysteine nucleophile; catalytic residues in the order His, Glu (or Asp), Cys in sequence
11136Cysteine nucleophile; catalytic residues in the order Glu, Cys, His in sequence
11Cysteine nucleophile; catalytic residues in the order His, Cys in sequence
32223315Families of peptidase inhibitors not assigned to clans
112
112
22315114
11
1111116Families of metallopeptidases not assigned to clans
10612981661Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HEXXH) and Glu, His or Asp
211127Water nucleophile; water bound by single zinc ion ligated to His, Glu (within the motif HXXE) and His
1113Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HXXEH) and Glu
11114Water nucleophile; water bound by two zinc ions ligated by Lys, Asp, Asp, Asp, Glu
67666536Water nucleophile; water bound by two cobalt or manganese ions ligated by Asp, Asp, His, Glu, Glu
8812139555Water nucleophile; water bound by two zinc ions ligated by His (or Asp), Asp, Glu, Asp (or Glu), His
56484532Water nucleophile; water bound by two zinc ions ligated by His, His or Asp, Lys or Glu, His, His.
111115Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HEXXH) and Asp; membrane proteins with intramembrane active site.
64753530Water nucleophile; water bound by single zinc ion ligated to two His and Asp (within the motif HSHP(X)9D)
1113Asparagine nucleophile; catalytic residues in the order Asp, Asn in sequence; all self-processing endopeptidases
112Serine or cysteine nucleophile; catalytic residues in the order His, Asp, Ser (or Cys) in sequence; all endopeptidases
191821202117116Threonine, serine or cysteine nucleophile at the N-terminus of mature enzyme
32825121Serine or cysteine nucleophile; catalytic residues in the order Cys (or Ser), His, Glu in sequence.
11Serine or threonine nucleophile; N-terminal nucleophile
2341221363Serine nucleophile; catalytic residues in the order Asp, His, Ser in sequence in family S8, but family S53 differs
464490566143340Serine nucleophile; catalytic residues in the order Ser, Asp, His in sequence
22123515Serine nucleophile; catalytic residues in the order Ser, Lys (within the motif SXXK) in sequence
33433420Serine nucleophile; catalytic residues in the order Ser, Lys (or His) in sequence
1225Serine nucleophile; catalytic residues in the order Ser, His, Asp in sequence
11Serine nucleophile; catalytic residues in the order His, Ser within the motif HXS.
32243216Serine nucleophile; transmembrane protein with catalytic residues in the order Ser, His embedded in the membrane
11Families of peptidases of unknown catalytic mechanism not assigned to clans
1111116
12131212141174
22
1337