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Peptidases • Lobaria pulmonaria Scotland extracted metagenome v1.0
Annotations/GenomesLobpul1LobpulAf1LobpulSc1LobpulSp1LobpulSw1TotalAnnotation Description
Merops
3043033002992921,498
3038333434169Water nucleophile; water bound by two Asp from monomer or dimer; all endopeptidases, from eukaryote organisms, viruses or virus-like organisms
212117Water nucleophile; water bound by two Asp; all membrane-bound endopeptidases known only from eubacteria with active site on cytoplasmic side of cell membrane.
2524262524124Cysteine nucleophile; catalytic residues in the order Cys, His, Asn (or Asp) in sequence
3233213Cysteine nucleophile; catalytic residues in the order His, Cys in sequence
111126Cysteine nucleophile; catalytic residues in the order His, Glu (or Asp), Cys in sequence
111115Cysteine nucleophile; catalytic residues in the order Glu, Cys, His in sequence
111115Cysteine nucleophile; catalytic residues in the order His, Cys in sequence
212117Water nucleophile; water bound by Gln and Glu; all endopeptidases
4444420Families of peptidase inhibitors not assigned to clans
111115
3322212
129910949Families of metallopeptidases not assigned to clans
151616181580Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HEXXH) and Glu, His or Asp
2222210Water nucleophile; water bound by single zinc ion ligated to His, Glu (within the motif HXXE) and His
2222210Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HXXEH) and Glu
6766631Water nucleophile; water bound by two cobalt or manganese ions ligated by Asp, Asp, His, Glu, Glu
151714141474Water nucleophile; water bound by two zinc ions ligated by His (or Asp), Asp, Glu, Asp (or Glu), His
121212101258Water nucleophile; water bound by two zinc ions ligated by His, His or Asp, Lys or Glu, His, His.
1113Water nucleophile; water bound by single zinc ion ligated to two His and Asp (within the motifs HXXXD and HXH)
3333315Water nucleophile; water bound by single zinc ion ligated to two His and Asp (within the motif HSHP(X)9D)
111115Serine or cysteine nucleophile; catalytic residues in the order His, Asp, Ser (or Cys) in sequence; all endopeptidases
211920191998Threonine, serine or cysteine nucleophile at the N-terminus of mature enzyme
211116Serine or cysteine nucleophile; catalytic residues in the order Cys (or Ser), His, Glu in sequence.
121215131264Serine nucleophile; catalytic residues in the order Asp, His, Ser in sequence in family S8, but family S53 differs
9492939391463Serine nucleophile; catalytic residues in the order Ser, Asp, His in sequence
5655627Serine nucleophile; catalytic residues in the order Ser, Lys (within the motif SXXK) in sequence
3334316Serine nucleophile; catalytic residues in the order Ser, Lys (or His) in sequence
2222210Serine nucleophile; catalytic residues in the order Ser, His, Asp in sequence
122128Serine nucleophile; transmembrane protein with catalytic residues in the order Ser, His embedded in the membrane
111115
161513141371
11
11
4345420