Due to a planned NERSC power outage, JGI portals will be unavailable 6:00am PDT July 10 - 11:59pm PDT July 14. System Status updates available here.
Peptidases • Phycomyces blakesleeanus L51 v1.0
Annotations/GenomesPhybl2Phybl_L51_1Phybla1PnitS607_1PnitS608_1PnitS609_1Spifus1TotalAnnotation Description
Merops
2842742762672742772291,881
28293130323219201Water nucleophile; water bound by two Asp from monomer or dimer; all endopeptidases, from eukaryote organisms, viruses or virus-like organisms
454455330Water nucleophile; water bound by two Asp; all membrane-bound endopeptidases known only from eubacteria with active site on cytoplasmic side of cell membrane.
29272825282723187Cysteine nucleophile; catalytic residues in the order Cys, His, Asn (or Asp) in sequence
7787710551Cysteine nucleophile; catalytic residues in the order His, Cys in sequence
333222217Cysteine nucleophile; catalytic residues in the order His, Glu (or Asp), Cys in sequence
11111117Cysteine nucleophile; catalytic residues in the order Cys, His, His in sequence
21221210Cysteine nucleophile; catalytic residues in the order His, Cys in sequence
665444433Families of peptidase inhibitors not assigned to clans
1113
11
11114
11
11112219
11111117
11111117Families of metallopeptidases not assigned to clans
17161517151714111Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HEXXH) and Glu, His or Asp
333333321Water nucleophile; water bound by two zinc ions ligated by Lys, Asp, Asp, Asp, Glu
1213131313131289Water nucleophile; water bound by two cobalt or manganese ions ligated by Asp, Asp, His, Glu, Glu
1514131312131191Water nucleophile; water bound by two zinc ions ligated by His (or Asp), Asp, Glu, Asp (or Glu), His
978878653Water nucleophile; water bound by two zinc ions ligated by His, His or Asp, Lys or Glu, His, His.
11111117Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HEXXH) and Asp; membrane proteins with intramembrane active site.
545444531Water nucleophile; water bound by single zinc ion ligated to two His and Asp (within the motif HSHP(X)9D)
11111117Serine or cysteine nucleophile; catalytic residues in the order His, Asp, Ser (or Cys) in sequence; all endopeptidases
17181818182019128Threonine, serine or cysteine nucleophile at the N-terminus of mature enzyme
323454223Serine or cysteine nucleophile; catalytic residues in the order Cys (or Ser), His, Glu in sequence.
1920191615159113Serine nucleophile; catalytic residues in the order Asp, His, Ser in sequence in family S8, but family S53 differs
55585656565650387Serine nucleophile; catalytic residues in the order Ser, Asp, His in sequence
444554329Serine nucleophile; catalytic residues in the order Ser, Lys (or His) in sequence
322111111Serine nucleophile; catalytic residues in the order Ser, His, Asp in sequence
1113Serine nucleophile; catalytic residues in the order His, Ser within the motif HXS.
767466642Serine nucleophile; transmembrane protein with catalytic residues in the order Ser, His embedded in the membrane
11111117
26202023232320155
11114
11