Peptidases • Rhodosporidium toruloides APA 2687 v1.0
Please note that this organism is for archival use only. Please see the current Rhodosporidium toruloides IFO0880 v4.0 site for the latest data and information.
Annotations/GenomesHetpy1Hyabl1Leucr1Mereb1Micvi1Rhoba1_1RhodotJ31_1Rhoglu1Rhomuc1Rhoto1Rhoto1_APA2687_1Rhoto_ATCC26217_1Rhoto_IFO0880_2Spopa1Sporo1TotalAnnotation Description
Merops
1721812302911901851631801691831811721761801582,811
12121430161089811109101511185Water nucleophile; water bound by two Asp from monomer or dimer; all endopeptidases, from eukaryote organisms, viruses or virus-like organisms
11Water nucleophile; water bound by two Asp; all membrane-bound endopeptidases known only from eubacteria with active site on periplasmic side of cell membrane.
11222222233232231Water nucleophile; water bound by two Asp; all membrane-bound endopeptidases known only from eubacteria with active site on cytoplasmic side of cell membrane.
222120191120151617161614191416256Cysteine nucleophile; catalytic residues in the order Cys, His, Asn (or Asp) in sequence
33232222222222233Cysteine nucleophile; catalytic residues in the order His, Cys in sequence
12211211112Cysteine nucleophile; catalytic residues in the order His, Glu (or Asp), Cys in sequence
11111111111112Cysteine nucleophile; catalytic residues in the order Glu, Cys, His in sequence
11114Cysteine nucleophile; catalytic residues in the order His, Cys in sequence
22232322322123334Families of peptidase inhibitors not assigned to clans
112
11111117
1113
11
22262322232132135
1111111212222119Families of metallopeptidases not assigned to clans
6891013108666755810117Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HEXXH) and Glu, His or Asp
111111118Water nucleophile; water bound by single zinc ion ligated to His, Glu (within the motif HXXE) and His
1121139Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HXXEH) and Glu
11111111111111115Water nucleophile; water bound by two zinc ions ligated by Lys, Asp, Asp, Asp, Glu
777877776777777105Water nucleophile; water bound by two cobalt or manganese ions ligated by Asp, Asp, His, Glu, Glu
881613111191391312131099164Water nucleophile; water bound by two zinc ions ligated by His (or Asp), Asp, Glu, Asp (or Glu), His
6614139101011913111210108152Water nucleophile; water bound by two zinc ions ligated by His, His or Asp, Lys or Glu, His, His.
111111111110Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HEXXH) and Asp; membrane proteins with intramembrane active site.
46555766655646581Water nucleophile; water bound by single zinc ion ligated to two His and Asp (within the motif HSHP(X)9D)
112Asparagine nucleophile; catalytic residues in the order Asp, Asn in sequence; all self-processing endopeptidases
112Serine or cysteine nucleophile; catalytic residues in the order His, Asp, Ser (or Cys) in sequence; all endopeptidases
181918241918181720191918192118285Threonine, serine or cysteine nucleophile at the N-terminus of mature enzyme
22443222222322337Serine or cysteine nucleophile; catalytic residues in the order Cys (or Ser), His, Glu in sequence.
33424111111314232Serine nucleophile; catalytic residues in the order Asp, His, Ser in sequence in family S8, but family S53 differs
4449711055947435245495245484333785Serine nucleophile; catalytic residues in the order Ser, Asp, His in sequence
22882344443323153Serine nucleophile; catalytic residues in the order Ser, Lys (within the motif SXXK) in sequence
33443543433335454Serine nucleophile; catalytic residues in the order Ser, Lys (or His) in sequence
11221122222222125Serine nucleophile; catalytic residues in the order Ser, His, Asp in sequence
22442423133331239Serine nucleophile; transmembrane protein with catalytic residues in the order Ser, His embedded in the membrane
11111111111111115
131210131111111211121112141014177
11
2114
11
123