Peptidases • Lobaria pulmonaria Scotland reference genome v1.0
Annotations/GenomesAstpho2Clagr3Dicre1EndpusZ1Lobpul1Tryvi1Usnflo1Xanpa2TotalAnnotation Description
Merops
2722313062103043562712592,209
418111230192018132Water nucleophile; water bound by two Asp from monomer or dimer; all endopeptidases, from eukaryote organisms, viruses or virus-like organisms
3646238537Water nucleophile; water bound by two Asp; all membrane-bound endopeptidases known only from eubacteria with active site on cytoplasmic side of cell membrane.
11Water nucleophile; water bound by two Asp
2521241925262424188Cysteine nucleophile; catalytic residues in the order Cys, His, Asn (or Asp) in sequence
3461343226Cysteine nucleophile; catalytic residues in the order His, Cys in sequence
3121111111Cysteine nucleophile; catalytic residues in the order His, Glu (or Asp), Cys in sequence
11111117Cysteine nucleophile; catalytic residues in the order Glu, Cys, His in sequence
1113Cysteine nucleophile; catalytic residues in the order Cys, His, His in sequence
213111110Cysteine nucleophile; catalytic residues in the order His, Cys in sequence
2417Water nucleophile; water bound by Gln and Glu; all endopeptidases
5454455537Families of peptidase inhibitors not assigned to clans
112
11
11
11
11114
122365221
352412107144Families of metallopeptidases not assigned to clans
11615181512815100Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HEXXH) and Glu, His or Asp
5131221217Water nucleophile; water bound by single zinc ion ligated to His, Glu (within the motif HXXE) and His
3262212220Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HXXEH) and Glu
112Water nucleophile; water bound by two zinc ions ligated by Lys, Asp, Asp, Asp, Glu
6688686755Water nucleophile; water bound by two cobalt or manganese ions ligated by Asp, Asp, His, Glu, Glu
1314121215151418113Water nucleophile; water bound by two zinc ions ligated by His (or Asp), Asp, Glu, Asp (or Glu), His
6511412123457Water nucleophile; water bound by two zinc ions ligated by His, His or Asp, Lys or Glu, His, His.
527Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HEXXH) and Asp; membrane proteins with intramembrane active site.
8343333330Water nucleophile; water bound by single zinc ion ligated to two His and Asp (within the motif HSHP(X)9D)
112Asparagine nucleophile; catalytic residues in the order Asp, Asn in sequence; all self-processing endopeptidases
4812116Serine or cysteine nucleophile; catalytic residues in the order His, Asp, Ser (or Cys) in sequence; all endopeptidases
2821211821242223178Threonine, serine or cysteine nucleophile at the N-terminus of mature enzyme
11164233333Serine or cysteine nucleophile; catalytic residues in the order Cys (or Ser), His, Glu in sequence.
44Cysteine nucleophile at the N-terminus of mature enzyme; catalytic residues in the order Cys, Thr, His
111115Serine or threonine nucleophile; N-terminal nucleophile
897212268678Serine nucleophile; catalytic residues in the order Asp, His, Ser in sequence in family S8, but family S53 differs
74688966941389784710Serine nucleophile; catalytic residues in the order Ser, Asp, His in sequence
164563530Serine nucleophile; catalytic residues in the order Ser, Lys (within the motif SXXK) in sequence
4362335329Serine nucleophile; catalytic residues in the order Ser, Lys (or His) in sequence
11Serine nucleophile; catalytic residues in the order His, Ser, His in sequence
112Serine nucleophile; catalytic residues in the order Ser, Lys in sequence
172194212249Serine nucleophile; catalytic residues in the order Ser, His, Asp in sequence
112Serine nucleophile; catalytic residues in the order His, Ser within the motif HXS.
11Serine nucleophile; catalytic residues in the order Ser, Glu, His
8382133432Serine nucleophile; transmembrane protein with catalytic residues in the order Ser, His embedded in the membrane
1111116
410771611121279
11
11
5243216