Due to a planned NERSC power outage, JGI portals will be unavailable 6:00am PDT July 10 - 11:59pm PDT July 14. System Status updates available here.
Peptidases • Rhytidhysteron rufulum
Annotations/GenomesDelco1Hyspu1_1Pyrtr1Rhyru1_1Stano2Tribi1TotalAnnotation Description
Merops
2733332973513432481,845
10111315131678Water nucleophile; water bound by two Asp from monomer or dimer; all endopeptidases, from eukaryote organisms, viruses or virus-like organisms
85887339Water nucleophile; water bound by two Asp; all membrane-bound endopeptidases known only from eubacteria with active site on cytoplasmic side of cell membrane.
272926222523152Cysteine nucleophile; catalytic residues in the order Cys, His, Asn (or Asp) in sequence
33433218Cysteine nucleophile; catalytic residues in the order His, Cys in sequence
2211118Cysteine nucleophile; catalytic residues in the order His, Glu (or Asp), Cys in sequence
23142113Cysteine nucleophile; catalytic residues in the order Glu, Cys, His in sequence
11Cysteine nucleophile; catalytic residues in the order Cys, His, His in sequence
111115Cysteine nucleophile; catalytic residues in the order His, Cys in sequence
312118Water nucleophile; water bound by Gln and Glu; all endopeptidases
63554528Families of peptidase inhibitors not assigned to clans
11
112116
44345323
52244219Families of metallopeptidases not assigned to clans
8121419161887Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HEXXH) and Glu, His or Asp
43747126Water nucleophile; water bound by single zinc ion ligated to His, Glu (within the motif HXXE) and His
12221210Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HXXEH) and Glu
67657536Water nucleophile; water bound by two cobalt or manganese ions ligated by Asp, Asp, His, Glu, Glu
221519202219117Water nucleophile; water bound by two zinc ions ligated by His (or Asp), Asp, Glu, Asp (or Glu), His
810121811463Water nucleophile; water bound by two zinc ions ligated by His, His or Asp, Lys or Glu, His, His.
32323316Water nucleophile; water bound by single zinc ion ligated to two His and Asp (within the motif HSHP(X)9D)
22223112Serine or cysteine nucleophile; catalytic residues in the order His, Asp, Ser (or Cys) in sequence; all endopeptidases
211919222119121Threonine, serine or cysteine nucleophile at the N-terminus of mature enzyme
55878437Serine or cysteine nucleophile; catalytic residues in the order Cys (or Ser), His, Glu in sequence.
11Cysteine nucleophile at the N-terminus of mature enzyme; catalytic residues in the order Cys, Thr, His
11125Serine or threonine nucleophile; N-terminal nucleophile
81313912964Serine nucleophile; catalytic residues in the order Asp, His, Ser in sequence in family S8, but family S53 differs
881369713313372659Serine nucleophile; catalytic residues in the order Ser, Asp, His in sequence
2156147448Serine nucleophile; catalytic residues in the order Ser, Lys (within the motif SXXK) in sequence
32223315Serine nucleophile; catalytic residues in the order Ser, Lys (or His) in sequence
2222210Serine nucleophile; catalytic residues in the order Ser, His, Asp in sequence
54325322Serine nucleophile; transmembrane protein with catalytic residues in the order Ser, His embedded in the membrane
11Families of peptidases of unknown catalytic mechanism not assigned to clans
11114
14111111101774
112
112
12241414