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Peptidases • Chlamydomonas reinhardtii v5.6
Annotations/GenomesChlre4Chlre5_6Chrzof1Dunsal1Gonpec1Monneg1Volca2_1TotalAnnotation Description
Merops
2872223152802773582181,957
319125223Water nucleophile; water bound by two Asp from monomer or dimer; all endopeptidases, from eukaryote organisms, viruses or virus-like organisms
322224217Water nucleophile; water bound by two Asp; all membrane-bound endopeptidases known only from eubacteria with active site on cytoplasmic side of cell membrane.
29142119203213148Cysteine nucleophile; catalytic residues in the order Cys, His, Asn (or Asp) in sequence
335543326Cysteine nucleophile; catalytic residues in the order His, Cys in sequence
3142515Cysteine nucleophile; catalytic residues in the order His, Glu (or Asp), Cys in sequence
1113Cysteine nucleophile; catalytic residues in the order Glu, Cys, His in sequence
1113Cysteine nucleophile; catalytic residues in the order Cys, His, His in sequence
221222213Cysteine nucleophile; catalytic residues in the order His, Cys in sequence
435452528Families of peptidase inhibitors not assigned to clans
11
1114119
112
111115
112
111115
2114
2316
11
1111116
511431116Families of metallopeptidases not assigned to clans
44372514442843235Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HEXXH) and Glu, His or Asp
446439232Water nucleophile; water bound by single zinc ion ligated to His, Glu (within the motif HXXE) and His
147411128Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HXXEH) and Glu
224325220Water nucleophile; water bound by two zinc ions ligated by Lys, Asp, Asp, Asp, Glu
569869548Water nucleophile; water bound by two cobalt or manganese ions ligated by Asp, Asp, His, Glu, Glu
1010111012131076Water nucleophile; water bound by two zinc ions ligated by His (or Asp), Asp, Glu, Asp (or Glu), His
679695749Water nucleophile; water bound by two zinc ions ligated by His, His or Asp, Lys or Glu, His, His.
334333221Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HEXXH) and Asp; membrane proteins with intramembrane active site.
112116Water nucleophile; water bound by single zinc ion ligated to two His and Asp (within the motifs HXXXD and HXH)
323735225Water nucleophile; water bound by single zinc ion ligated to two His and Asp (within the motif HSHP(X)9D)
11121118Asparagine nucleophile; catalytic residues in the order Asp, Asn in sequence; all self-processing endopeptidases
77124819865Serine or cysteine nucleophile; catalytic residues in the order His, Asp, Ser (or Cys) in sequence; all endopeptidases
18192518192719145Threonine, serine or cysteine nucleophile at the N-terminus of mature enzyme
99111279865Serine or cysteine nucleophile; catalytic residues in the order Cys (or Ser), His, Glu in sequence.
2215Cysteine nucleophile at the N-terminus of mature enzyme; catalytic residues in the order Cys, Thr, His
11Serine or threonine nucleophile; N-terminal nucleophile
3197311135Serine nucleophile; catalytic residues in the order Asp, His, Ser in sequence in family S8, but family S53 differs
745995746810054524Serine nucleophile; catalytic residues in the order Ser, Asp, His in sequence
134Serine nucleophile; catalytic residues in the order Ser, Lys (within the motif SXXK) in sequence
343412219Serine nucleophile; catalytic residues in the order Ser, Lys (or His) in sequence
314Serine nucleophile; catalytic residues in the order Ser, Lys in sequence
10812101112871Serine nucleophile; catalytic residues in the order Ser, His, Asp in sequence
11Serine nucleophile; catalytic residues in the order His, Ser within the motif HXS.
516Serine nucleophile; catalytic residues in the order Lys, Ser in sequence
877674645Serine nucleophile; transmembrane protein with catalytic residues in the order Ser, His embedded in the membrane
448Families of peptidases of unknown catalytic mechanism not assigned to clans
1447241012374
33
11