Peptidases • Coccodinium bartschii CBS 121709 v1.0
Annotations/GenomesAspfo1Cocba1Colsu1Gymci1_1Monpu1Pseel1Xanpa2TotalAnnotation Description
Merops
3722504102192433132592,066
12141498231898Water nucleophile; water bound by two Asp from monomer or dimer; all endopeptidases, from eukaryote organisms, viruses or virus-like organisms
1113Water nucleophile; water bound by two Asp; all membrane-bound endopeptidases known only from eubacteria with active site on periplasmic side of cell membrane.
1043343532Water nucleophile; water bound by two Asp; all membrane-bound endopeptidases known only from eubacteria with active site on cytoplasmic side of cell membrane.
35222425331424177Cysteine nucleophile; catalytic residues in the order Cys, His, Asn (or Asp) in sequence
333233219Cysteine nucleophile; catalytic residues in the order His, Cys in sequence
221218Cysteine nucleophile; catalytic residues in the order His, Glu (or Asp), Cys in sequence
1121117Cysteine nucleophile; catalytic residues in the order Glu, Cys, His in sequence
1113Cysteine nucleophile; catalytic residues in the order Cys, His, His in sequence
1113Cysteine nucleophile; catalytic residues in the order His, Cys in sequence
6227118Water nucleophile; water bound by Gln and Glu; all endopeptidases
544454531Families of peptidase inhibitors not assigned to clans
11
11
11
11212119
427223222
11
928624132Families of metallopeptidases not assigned to clans
1410211210141596Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HEXXH) and Glu, His or Asp
127111215Water nucleophile; water bound by single zinc ion ligated to His, Glu (within the motif HXXE) and His
121127Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HXXEH) and Glu
11Water nucleophile; water bound by two zinc ions ligated by Lys, Asp, Asp, Asp, Glu
8612679755Water nucleophile; water bound by two cobalt or manganese ions ligated by Asp, Asp, His, Glu, Glu
25142813191918136Water nucleophile; water bound by two zinc ions ligated by His (or Asp), Asp, Glu, Asp (or Glu), His
1671771010471Water nucleophile; water bound by two zinc ions ligated by His, His or Asp, Lys or Glu, His, His.
534334325Water nucleophile; water bound by single zinc ion ligated to two His and Asp (within the motif HSHP(X)9D)
11Water nucleophile; water bound by single zinc ion ligated to Asp, His and His.
214119Serine or cysteine nucleophile; catalytic residues in the order His, Asp, Ser (or Cys) in sequence; all endopeptidases
20232720202123154Threonine, serine or cysteine nucleophile at the N-terminus of mature enzyme
724353327Serine or cysteine nucleophile; catalytic residues in the order Cys (or Ser), His, Glu in sequence.
12115Serine or threonine nucleophile; N-terminal nucleophile
11Families of serine peptidases not assigned to clans
114224918674Serine nucleophile; catalytic residues in the order Asp, His, Ser in sequence in family S8, but family S53 differs
14994149676511784725Serine nucleophile; catalytic residues in the order Ser, Asp, His in sequence
468486541Serine nucleophile; catalytic residues in the order Ser, Lys (within the motif SXXK) in sequence
323332319Serine nucleophile; catalytic residues in the order Ser, Lys (or His) in sequence
221221212Serine nucleophile; catalytic residues in the order Ser, His, Asp in sequence
2114Serine nucleophile; catalytic residues in the order Ser, Glu, His
134213418Serine nucleophile; transmembrane protein with catalytic residues in the order Ser, His embedded in the membrane
213Families of peptidases of unknown catalytic mechanism not assigned to clans
11111117
10111489121276
11
12433417