Peptidases • Gonapodya prolifera v1.0
Annotations/GenomesBatde5Ganpr1TotalAnnotation Description
Merops
314341655
1036109Water nucleophile; water bound by two Asp from monomer or dimer; all endopeptidases, from eukaryote organisms, viruses or virus-like organisms
22Water nucleophile; water bound by two Asp; all membrane-bound endopeptidases known only from eubacteria with active site on cytoplasmic side of cell membrane.
192140Cysteine nucleophile; catalytic residues in the order Cys, His, Asn (or Asp) in sequence
3710Cysteine nucleophile; catalytic residues in the order His, Cys in sequence
224Cysteine nucleophile; catalytic residues in the order His, Glu (or Asp), Cys in sequence
112Cysteine nucleophile; catalytic residues in the order Glu, Cys, His in sequence
11Water nucleophile; water bound by Glu; all self-cleaving endopeptidases
5510Families of peptidase inhibitors not assigned to clans
22
11
11
11
145Families of metallopeptidases not assigned to clans
351853Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HEXXH) and Glu, His or Asp
167Water nucleophile; water bound by single zinc ion ligated to His, Glu (within the motif HXXE) and His
213Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HXXEH) and Glu
246Water nucleophile; water bound by two zinc ions ligated by Lys, Asp, Asp, Asp, Glu
7714Water nucleophile; water bound by two cobalt or manganese ions ligated by Asp, Asp, His, Glu, Glu
111627Water nucleophile; water bound by two zinc ions ligated by His (or Asp), Asp, Glu, Asp (or Glu), His
41317Water nucleophile; water bound by two zinc ions ligated by His, His or Asp, Lys or Glu, His, His.
11Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HEXXH) and Asp; membrane proteins with intramembrane active site.
11Water nucleophile; water bound by two zinc ions ligated by Asp, Glu, His, His, Glu
639Water nucleophile; water bound by single zinc ion ligated to two His and Asp (within the motif HSHP(X)9D)
112Asparagine nucleophile; catalytic residues in the order Asp, Asn in sequence; all self-processing endopeptidases
91322Serine or cysteine nucleophile; catalytic residues in the order His, Asp, Ser (or Cys) in sequence; all endopeptidases
152136Threonine, serine or cysteine nucleophile at the N-terminus of mature enzyme
5510Serine or cysteine nucleophile; catalytic residues in the order Cys (or Ser), His, Glu in sequence.
44Serine or threonine nucleophile; N-terminal nucleophile
246Serine nucleophile; catalytic residues in the order Asp, His, Ser in sequence in family S8, but family S53 differs
44119163Serine nucleophile; catalytic residues in the order Ser, Asp, His in sequence
11617Serine nucleophile; catalytic residues in the order Ser, Lys (within the motif SXXK) in sequence
5510Serine nucleophile; catalytic residues in the order Ser, Lys (or His) in sequence
134Serine nucleophile; catalytic residues in the order Ser, His, Asp in sequence
369Serine nucleophile; transmembrane protein with catalytic residues in the order Ser, His embedded in the membrane
22Families of peptidases of unknown catalytic mechanism not assigned to clans
11
241741
22