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Peptidases • Hymenopellis radicata IJFM A160 v1.0
Annotations/GenomesArmme1_1Guyne1Gyman1Gymlu1Hymrad1Marfi1Monpe1_1Ompol1TotalAnnotation Description
Merops
4163586155615404554572513,653
3528565542251920280Water nucleophile; water bound by two Asp from monomer or dimer; all endopeptidases, from eukaryote organisms, viruses or virus-like organisms
1123131113Water nucleophile; water bound by two Asp; all membrane-bound endopeptidases known only from eubacteria with active site on cytoplasmic side of cell membrane.
112Water nucleophile; water bound by two Asp
1321302336242018185Cysteine nucleophile; catalytic residues in the order Cys, His, Asn (or Asp) in sequence
742081112666143Cysteine nucleophile; catalytic residues in the order His, Cys in sequence
18551323Cysteine nucleophile; catalytic residues in the order His, Glu (or Asp), Cys in sequence
11Cysteine nucleophile; catalytic residues in the order Glu, Cys, His in sequence
1012123Water nucleophile; water bound by Gln and Glu; all endopeptidases
436122107145Families of peptidase inhibitors not assigned to clans
11
11
112
111111118
5686754344
233363525Families of metallopeptidases not assigned to clans
2216171236404114198Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HEXXH) and Glu, His or Asp
1121117Water nucleophile; water bound by single zinc ion ligated to His, Glu (within the motif HXXE) and His
214112920Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HXXEH) and Glu
1172222118Water nucleophile; water bound by two zinc ions ligated by Lys, Asp, Asp, Asp, Glu
7101310141112885Water nucleophile; water bound by two cobalt or manganese ions ligated by Asp, Asp, His, Glu, Glu
1313272224253015169Water nucleophile; water bound by two zinc ions ligated by His (or Asp), Asp, Glu, Asp (or Glu), His
151514151415188114Water nucleophile; water bound by two zinc ions ligated by His, His or Asp, Lys or Glu, His, His.
111317Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HEXXH) and Asp; membrane proteins with intramembrane active site.
3126113Water nucleophile; water bound by single zinc ion ligated to two His and Asp (within the motifs HXXXD and HXH)
4775863444Water nucleophile; water bound by single zinc ion ligated to two His and Asp (within the motif HSHP(X)9D)
1621252329262217179Threonine, serine or cysteine nucleophile at the N-terminus of mature enzyme
4611125710661Serine or cysteine nucleophile; catalytic residues in the order Cys (or Ser), His, Glu in sequence.
1214Serine or threonine nucleophile; N-terminal nucleophile
127443018111212146Serine nucleophile; catalytic residues in the order Asp, His, Ser in sequence in family S8, but family S53 differs
168150238190234202185951,462Serine nucleophile; catalytic residues in the order Ser, Asp, His in sequence
14144855142Serine nucleophile; catalytic residues in the order Ser, Lys (within the motif SXXK) in sequence
1324433121Serine nucleophile; catalytic residues in the order Ser, Lys (or His) in sequence
33Serine nucleophile; catalytic residues in the order Ser, Lys in sequence
1111116Serine nucleophile; catalytic residues in the order Ser, His, Asp in sequence
11Serine nucleophile; catalytic residues in the order Ser, Glu, His
1454331425Serine nucleophile; transmembrane protein with catalytic residues in the order Ser, His embedded in the membrane
112Families of peptidases of unknown catalytic mechanism not assigned to clans
1111116
611488717132813223
11