PFAM Domains • Trichoderma reesei v2.0
Annotations/GenomesTriat1Trire2Trive1TotalAnnotation Description
PFAMs
7,3786,5077,87821,763
117 transmembrane receptor (Secretin family)
494449142ATPase family associated with various cellular activities (AAA)
474661154ABC transporter
44412ATP synthase alpha/beta family, nucleotide-binding domain
14141341Elongation factor Tu GTP binding domain
109928Helix-loop-helix DNA-binding domain
23510Hsp20/alpha crystallin family
77721Hsp70 protein
88824KH domain
1113SH2 domain
24242472SH3 domain
77721Actin
906394247Ankyrin repeat
3249PAN domain
77721ADP-ribosylation factor family
20162157Eukaryotic aspartyl protease
44412Cyclic nucleotide-binding domain
1113Cytochrome c
3238Double-stranded RNA binding motif
23202265EF hand
11134Fe-4S binding domain
1124Fibronectin type III domain
2226Globin
13101639Glutathione S-transferase, C-terminal domain
1124Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
85922Homeodomain
3238lactate/malate dehydrogenase, NAD binding domain
44513Myosin head (motor domain)
6369107239Cytochrome P450
110106124340Protein kinase domain
15142150Pyridine nucleotide-disulphide oxidoreductase
22232368Ras family
15131442Response regulator receiver domain
2259RNase H
565960175RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
2226Copper/zinc superoxide dismutase (SODC)
2226Iron/manganese superoxide dismutases, alpha-hairpin domain
38152881Subtilase family
10076110286Sugar (and other) transporter
11111133Thioredoxin
1124Trypsin
56516Tubulin/FtsZ family, GTPase domain
3249von Willebrand factor type A domain
826789238Zinc finger, C2H2 type
30323193Zinc finger, C3HC4 type (RING finger)
65718Zinc knuckle
3227Protein-tyrosine phosphatase
157118176451short chain dehydrogenase
915398242Zinc-binding dehydrogenase
66719Thiolase, N-terminal domain
22172665Beta-ketoacyl synthase, N-terminal domain
555152Fe-2S iron-sulfur cluster binding domain
2125Enolase, C-terminal TIM barrel domain
213Cytochrome C and Quinol oxidase polypeptide I
771024Glutamine amidotransferase class-I
10101030TCP-1/cpn60 chaperonin family
2248Glutamine synthetase, catalytic domain
2226Triosephosphate isomerase
15161950E1-E2 ATPase
77822Core histone H2A/H2B/H3/H4
44513Alpha amylase, catalytic domain
1225Phorbol esters/diacylglycerol binding domain (C1 domain)
98825Bacterial transferase hexapeptide (six repeats)
86822tRNA synthetases class I (I, L, M and V)
87924Cyclin, N-terminal domain
18122656Carboxylesterase family
44412DNA polymerase family B
64414ATP synthase subunit C
66719Peroxidase
1781742Beta-lactamase
2125C-5 cytosine-specific DNA methylase
29273187Calcineurin-like phosphoesterase
84820Cellulase (glycosyl hydrolase family 5)
88824tRNA synthetases class II (D, K and N)
363537108Mitochondrial carrier protein
17162457Aminotransferase class I and II
108826Phosphoribosyl transferase domain
10101030Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1113Phosphoglycerate kinase
2226Ribosomal protein S4/S9 N-terminal domain
2226Ribosomal protein S12/S23
3115Bacterial regulatory helix-turn-helix proteins, AraC family
1113Chaperonin 10 Kd subunit
12141339C2 domain
18191855PH domain
11111335bZIP transcription factor
24203074Aldehyde dehydrogenase family
270192276738Fungal Zn(2)-Cys(6) binuclear cluster domain
23212569Cytochrome b5-like Heme/Steroid binding domain
24410Oxidoreductase molybdopterin binding domain
15141847Oxidoreductase NAD-binding domain
28252881SNF2 family N-terminal domain
2226Ribosomal protein S7p/S5e
19202059Ubiquitin-conjugating enzyme
77721Isocitrate/isopropylmalate dehydrogenase
2226Ribosomal Proteins L2, RNA binding domain
1113Hsp90 protein
1225Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1113Dihydrofolate reductase
62715Chitin recognition protein
3339Cysteine-rich secretory protein family
1113Ribosomal protein S3, C-terminal domain
53412Cupin
3227Annexin
1113Eukaryotic-type carbonic anhydrase
334102-oxoacid dehydrogenases acyltransferase (catalytic domain)
77721Catalase
1113Disintegrin
881026Aminotransferase class-III
2226Ribosomal protein S19
1113DNA gyrase B
74819Thiamine pyrophosphate enzyme, central domain
3339Lyase
2215Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
1113Adenylate and Guanylate cyclase catalytic domain
1113ATP synthase delta (OSCP) subunit
1113Orotidine 5'-phosphate decarboxylase / HUMPS family
1113Indole-3-glycerol phosphate synthase
11Aromatic amino acid lyase
1113Pyruvate kinase, barrel domain
9111030Kinesin motor domain
26262577DnaJ domain
14141442Proteasome subunit
67720Major intrinsic protein
1113ATP synthase
4228Glycosyl hydrolase family 1
11133'5'-cyclic nucleotide phosphodiesterase
1113Profilin
1113Ribosomal protein L22p/L17e
2215Ribosomal protein L14p/L23e
1081028Ubiquitin family
33410Cofilin/tropomyosin-type actin-binding protein
222614-3-3 protein
2338Alkaline phosphatase
44412Zinc carboxypeptidase
352744106Aldo/keto reductase family
14141644Myb-like DNA-binding domain
44412Forkhead domain
112Glycosyl hydrolases family 32 N-terminal domain
112Ribosomal protein L16p/L10e
1113Ribosomal protein S14p/S29e
3339FKBP-type peptidyl-prolyl cis-trans isomerase
1113Glutathione peroxidase
1225
77822Flavodoxin
1113Calreticulin family
3238Common central domain of tyrosinase
43310Aminotransferase class-V
1113Ribonucleotide reductase, small chain
454942136DEAD/DEAH box helicase
747571220Helicase conserved C-terminal domain
1113EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
1225Ribosomal protein L23
1113Pyridoxal-dependent decarboxylase, C-terminal sheet domain
2226Ribosomal protein L5
86721Pyridoxal-dependent decarboxylase conserved domain
2226Citrate synthase, C-terminal domain
55515GHMP kinases N terminal domain
65718Biotin carboxylase, N-terminal domain
1113Tryptophan synthase alpha chain
12121539Pyridoxal-phosphate dependent enzyme
19152054NUDIX domain
34411pfkB family carbohydrate kinase
64616Glycosyl hydrolases family 28
2226Ribosomal protein L3
2226Ribosomal protein L11, RNA binding domain
76720Histidine phosphatase superfamily (branch 1)
1113Thymidylate synthase
11Lipoxygenase
44412ATP synthase alpha/beta chain, C terminal domain
55515Calponin homology (CH) domain
44513Glutamine amidotransferases class-II
2215Ribosomal protein S15
11Thaumatin family
2226Fructose-1-6-bisphosphatase, N-terminal domain
1113Ribonucleotide reductase, all-alpha domain
2226Ribosomal protein S2
2226SRF-type transcription factor (DNA-binding and dimerisation domain)
66618GATA zinc finger
333335101Amino acid permease
2114Prolyl oligopeptidase family
2226Ribosomal protein L30p/L7e
44412Histidine phosphatase superfamily (branch 2)
1113Respiratory-chain NADH dehydrogenase, 30 Kd subunit
64616Aconitase family (aconitate hydratase)
1124Glycosyl hydrolase family 10
112Glycosyl hydrolases family 17
1225Ribosomal protein S5, N-terminal domain
1113Nucleoside diphosphate kinase
1113Ribosomal protein S10p/S20e
2327Arrestin (or S-antigen), N-terminal domain
1113Phosphoglucose isomerase
1113Carbohydrate phosphorylase
1113SecY translocase
1113Respiratory-chain NADH dehydrogenase, 49 Kd subunit
2226Ribosomal protein L6
3339Polyprenyl synthetase
44513Hexokinase
991129Dynamin family
1113Transcription factor TFIID (or TATA-binding protein, TBP)
34411Rieske [2Fe-2S] domain
86923Biotin-requiring enzyme
1113Phosphofructokinase
2226Ribosomal protein S17
1113Hydroxymethylglutaryl-coenzyme A reductase
3339FGGY family of carbohydrate kinases, N-terminal domain
14121743Enoyl-CoA hydratase/isomerase
2226Ribosomal protein S9/S16
2226Transcription factor TFIIB repeat
76518Cytidine and deoxycytidylate deaminase zinc-binding region
1113Molybdopterin oxidoreductase
3126Chromo (CHRromatin Organisation MOdifier) domain
44412Phosphatidylinositol-specific phospholipase C, Y domain
56617Phosphatidylinositol-specific phospholipase C, X domain
95923D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
2226Malic enzyme, N-terminal domain
11PEP-utilising enzyme, mobile domain
21146-phosphogluconate dehydrogenase, C-terminal domain
108927Multicopper oxidase
1110930WW domain
1113Ribosomal RNA adenine dimethylase
139123147409WD domain, G-beta repeat
55616Heavy-metal-associated domain
34310Adenylate kinase
2226Phosphoglucomutase/phosphomannomutase, C-terminal domain
1225Ribosomal protein S8
1113Ribosomal protein S11
44412LIM domain
2114Regulator of chromosome condensation (RCC1) repeat
2226Ribosomal protein S13/S18
2226chorismate binding enzyme
333960s Acidic ribosomal protein
34411Prenyltransferase and squalene oxidase repeat
55515Protein kinase C terminal domain
1113Single-strand binding protein family
1113S-adenosylmethionine synthetase, N-terminal domain
77721Bromodomain
981027Acyl-CoA dehydrogenase, C-terminal domain
14151443Ubiquitin carboxyl-terminal hydrolase
1113Ribosomal protein L36
43512Ribonuclease T2 family
3339HSF-type DNA-binding
2226SRP54-type protein, GTPase domain
1113Urease alpha-subunit, N-terminal domain
65718Serine carboxypeptidase
88824Phosphatidylinositol 3- and 4-kinase
2226Transketolase, thiamine diphosphate binding domain
43411Glycosyl hydrolases family 11
44412Inositol monophosphatase family
3339Glutaredoxin
2226Isocitrate lyase family
2226Serine hydroxymethyltransferase
2237Iron-containing alcohol dehydrogenase
2226Ribosomal protein L10
56617KOW motif
2226RF-1 domain
45413Sodium:solute symporter family
112Imidazoleglycerol-phosphate dehydratase
1113DNA polymerase family A
1113IMP dehydrogenase / GMP reductase domain
1113Glucose-6-phosphate dehydrogenase, NAD binding domain
66719Protein phosphatase 2C
3339Nucleotidyl transferase
84820Carbonic anhydrase
1214Phosphoribulokinase / Uridine kinase family
76619Fatty acid desaturase
66618MutS domain V
1113Delta-aminolevulinic acid dehydratase
33410Arginase family
66618MCM P-loop domain
1113Squalene/phytoene synthase
98825FHA domain
473761145AMP-binding enzyme
3339G-protein alpha subunit
77923HMG (high mobility group) box
11Cytochrome c oxidase subunit III
12101133His Kinase A (phospho-acceptor) domain
3339Armadillo/beta-catenin-like repeat
37243798Tetratricopeptide repeat
35412Ion transport protein
1113DNA gyrase/topoisomerase IV, subunit A
9111131BRCA1 C Terminus (BRCT) domain
56617Glycosyl transferases group 1
3339Glycosyl transferase family 2
3339SAM domain (Sterile alpha motif)
1113linker histone H1 and H5 family
1113Ribosomal protein L7/L12 C-terminal domain
11Pectate lyase
2125ribonuclease
1113Urease, gamma subunit
55515CoA-ligase
29193482Phosphopantetheine attachment site
3339Formyl transferase
98926Metallopeptidase family M24
16161648Leucine Rich Repeat
372247106alpha/beta hydrolase fold
3339RNA polymerase Rpb2, domain 6
44412PB1 domain
2226Staphylococcal nuclease homologue
10101030Rab-GTPase-TBC domain
1113Tudor domain
1113WH1 domain
45312Zinc finger, ZZ type
1113HRDC domain
89926CBS domain
2226Ribosomal protein L13
2226Ribosomal protein L4/L1 family
1113Clp protease
35513S1 RNA binding domain
1113HIUase/Transthyretin family
43411AhpC/TSA family
44412tRNA synthetases class I (W and Y)
11UvrD/REP helicase N-terminal domain
64717Rhodanese-like domain
2226Universal stress protein family
484059147Acetyltransferase (GNAT) family
1113SecE/Sec61-gamma subunits of protein translocation complex
1113C-terminal regulatory domain of Threonine dehydratase
2226AIR synthase related protein, N-terminal domain
88824tRNA synthetase class II core domain (G, H, P, S and T)
1113SpoU rRNA Methylase family
2226Tetrapyrrole (Corrin/Porphyrin) Methylases
1113Glycosyl transferase family, a/b domain
2125PDZ domain
43310Class II Aldolase and Adducin N-terminal domain
44311Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
3339Fes/CIP4, and EFC/F-BAR homology domain
65516IQ calmodulin-binding motif
2226Phosphoinositide 3-kinase family, accessory domain (PIK domain)
65516Phospholipase D Active site motif
1113Regulator of G protein signaling domain
44412GTPase-activator protein for Ras-like GTPase
34411RasGEF domain
3227RasGEF N-terminal motif
88824RhoGAP domain
55616RhoGEF domain
43310SPRY domain
3339RNA polymerase Rpb1, domain 2
2338Guanylate kinase
44311Gelsolin repeat
87823UBA/TS-N domain
17151547PHD-finger
1113GGL domain
66618HECT-domain (ubiquitin-transferase)
3227Helix-hairpin-helix motif
1113MSP (Major sperm protein) domain
34310Ribonuclease III domain
2226Region in Clathrin and VPS
3328RanBP1 domain
2226PPIC-type PPIASE domain
3238Zn-finger in Ran binding protein and others
15151747Zinc finger C-x8-C-x5-C-x3-H type (and similar)
1113Poly(ADP-ribose) polymerase catalytic domain
695168188F-box domain
1113Elongation factor 1 gamma, conserved domain
33410Calpain family cysteine protease
2226Copper fist DNA binding domain
55616CRAL/TRIO domain
25411BTB/POZ domain
54413Ricin-type beta-trefoil lectin domain
1113Inhibitor of Apoptosis domain
3339Voltage gated chloride channel
3238Caspase domain
851023GDSL-like Lipase/Acylhydrolase
1113Poly-adenylate binding protein, unique domain
25253787ABC transporter transmembrane region
66719FAD binding domain
18102654Condensation domain
1113S-adenosyl-L-homocysteine hydrolase, NAD binding domain
1113HAMP domain
2226ribosomal L5P family C-terminus
55515Insulinase (Peptidase family M16)
33410Dehydrogenase E1 component
1113Lumazine binding domain
55515Elongation factor G C-terminus
44513HMGL-like
44412DnaJ central domain
3115Starch binding domain
3227Ribosomal protein L1p/L10e family
891229Cation transporting ATPase, C-terminus
7101128Cation transporter/ATPase, N-terminus
1124dUTPase
64616Aconitase C-terminal domain
43411Amino acid kinase family
1113N-(5'phosphoribosyl)anthranilate (PRA) isomerase
22172766Acyl transferase domain
1113Urease beta subunit
76720Dihydrodipicolinate synthetase family
32313699haloacid dehalogenase-like hydrolase
87823Glycosyl hydrolases family 2
28193279Glycosyl hydrolases family 18
1113Proliferating cell nuclear antigen, N-terminal domain
11Translation initiation factor IF-3, C-terminal domain
2125Adenylosuccinate synthetase
1113Asparaginase, N-terminal
2226Peptidase S24-like
3238Inorganic pyrophosphatase
11131236Glycosyl hydrolases family 16
3227Glycosyl hydrolases family 15
1781540NADH:flavin oxidoreductase / NADH oxidase family
425113-hydroxyacyl-CoA dehydrogenase, C-terminal domain
3339Glycosyl hydrolase family 20, catalytic domain
45514HhH-GPD superfamily base excision DNA repair protein
1113AIR carboxylase
12121640GMC oxidoreductase
2237Asparagine synthase
19142255Fungal cellulose binding domain
55515Septin
1124EF-1 guanine nucleotide exchange domain
1113Homoserine dehydrogenase
11Flavin-binding monooxygenase-like
3339tRNA synthetases class I (E and Q), catalytic domain
1113tRNA synthetases class I (R)
3339XPG N-terminal domain
10101636Metallo-beta-lactamase superfamily
2114F5/8 type C domain
2226Choline/Carnitine o-acyltransferase
1113Putative esterase
1113Ferrochelatase
2226Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
2215Arginosuccinate synthase
1113Electron transfer flavoprotein FAD-binding domain
3339RNB domain
34613Dioxygenase
3227CNH domain
1113Diacylglycerol kinase catalytic domain
54413Dual specificity phosphatase, catalytic domain
44412
2338P21-Rho-binding domain
12121236PX domain
3339Ras association (RalGDS/AF-6) domain
44412UBX domain
44412VHS domain
1113Phosphoinositide 3-kinase C2
2226DAHP synthetase I family
15121845Carbon-nitrogen hydrolase
1124N-acetyltransferase
1113Prephenate dehydratase
34411Syntaxin
55515Pumilio-family RNA binding repeat
65516Histone-like transcription factor (CBF/NF-Y) and archaeal histone
1113Pterin binding enzyme
2226ER lumen protein retaining receptor
2226tRNA N6-adenosine threonylcarbamoyltransferase
1113Histidinol dehydrogenase
44412impB/mucB/samB family
11Ice nucleation protein repeat
1113
1113Ribosomal L15
1113Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
11Ribosomal L28 family
1113Ribosomal L29 protein
1113Ribosomal L39 protein
1113Ribosomal S17
1113Ribulose-phosphate 3 epimerase family
1113Translationally controlled tumour protein
2226Glycosyl hydrolase family 7
1113RNA pseudouridylate synthase
44412Histone deacetylase domain
43411POT family
1113PWWP domain
129930SET domain
1171028Isochorismatase family
2226Permease family
1113Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
44412XPG I-region
112Acetokinase family
3328DNA photolyase
22Nitroreductase family
95923Sulfatase
11136,7-dimethyl-8-ribityllumazine synthase
1113Ribosomal protein S16
2226Acyl CoA binding protein
3339Cullin family
2226FAD binding domain
23914O-methyltransferase domain
1113EamA-like transporter family
1113
88824ThiF family
1113Ribosomal family S4e
52714Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
2226Ammonium Transporter Family
55414Sulfate permease family
1113MATH domain
33410Dehydratase family
42410Transaldolase/Fructose-6-phosphate aldolase
3238Mechanosensitive ion channel
2226GTP cyclohydrolase II
11133,4-dihydroxy-2-butanone 4-phosphate synthase
3339Adaptor complexes medium subunit family
67821Exonuclease
1113Dipeptidyl peptidase IV (DPP IV) N-terminal region
4913NB-ARC domain
13131743Glycosyl hydrolase family 3 N terminal domain
1113Ribosomal protein L44
1113Sodium:sulfate symporter transmembrane region
1113DNA-dependent RNA polymerase
1113FAD binding domain in molybdopterin dehydrogenase
1113Glycosyl transferase family 4
1113HCO3- transporter family
2215Nucleosome assembly protein (NAP)
44412Synaptobrevin
1124GMP synthase C terminal domain
112Phage lysozyme
77822Adenosine/AMP deaminase
75820Oxidoreductase FAD-binding domain
3137Thioesterase domain
2226Histidine biosynthesis protein
54413Glycosyltransferase family 20
2237UDP-glucose/GDP-mannose dehydrogenase family, central domain
2226Carbamoyl-phosphate synthase small chain, CPSase domain
11PAS fold
1113
2226Probable molybdopterin binding domain
44412Sec1 family
2226GDP dissociation inhibitor
2226Sodium/hydrogen exchanger family
2226RNA polymerase Rpb3/RpoA insert domain
55515Initiation factor 2 subunit family
1113Electron transfer flavoprotein domain
1113Uricase
1113Ribosomal S3Ae family
1113Ribosomal L27 protein
3339GTP1/OBG
44412Gamma-glutamyltranspeptidase
11Ribosomal L40e family
112GrpE
2237TatD related DNase
1113Inhibitor of apoptosis-promoting Bax1
1113Eukaryotic DNA topoisomerase I, catalytic core
2327Dynamin central region
32386-O-methylguanine DNA methyltransferase, DNA binding domain
11Bacteriorhodopsin-like protein
2226Carboxyl transferase domain
54716UbiA prenyltransferase family
1151026Endoribonuclease L-PSP
1113Phosphorylase superfamily
87722Cys/Met metabolism PLP-dependent enzyme
74516Glycosyl hydrolases family 31
2114NADH ubiquinone oxidoreductase, 20 Kd subunit
64717Amino-transferase class IV
65617CDP-alcohol phosphatidyltransferase
1113Calpain large subunit, domain III
3339ATP dependent DNA ligase domain
86721FMN-dependent dehydrogenase
1124Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
21143-beta hydroxysteroid dehydrogenase/isomerase family
1124Glycosyl hydrolases family 38 N-terminal domain
1225Nitrite and sulphite reductase 4Fe-4S domain
54615Cutinase
1113Clathrin light chain
1113Galactose-1-phosphate uridyl transferase, N-terminal domain
44412Ubiquitin carboxyl-terminal hydrolase, family 1
2237
1113Ribosomal protein S19e
1113Ribosomal protein S6e
123Pectinesterase
54514Transcription factor S-II (TFIIS)
1113Omp85 superfamily domain
44412emp24/gp25L/p24 family/GOLD
1113NifU-like domain
1113Cyclin-dependent kinase regulatory subunit
2338Asparaginase
1113F-actin capping protein, beta subunit
2226Fructose-bisphosphate aldolase class-II
2226Semialdehyde dehydrogenase, NAD binding domain
2237DNA mismatch repair protein, C-terminal domain
1113Dephospho-CoA kinase
1113MAPEG family
1113G10 protein
1113Succinate dehydrogenase/Fumarate reductase transmembrane subunit
1113DNA topoisomerase
1113Glucose inhibited division protein A
1113Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
2226RNA 3'-terminal phosphate cyclase
656173' exoribonuclease family, domain 1
1113tRNA pseudouridine synthase D (TruD)
2226Coenzyme A transferase
44412SPFH domain / Band 7 family
3339Cytidylyltransferase family
1113Formamidopyrimidine-DNA glycosylase N-terminal domain
2226GDA1/CD39 (nucleoside phosphatase) family
3339GNS1/SUR4 family
1113Hydroxymethylglutaryl-coenzyme A synthase N terminal
3339Inosine-uridine preferring nucleoside hydrolase
1113Ribosomal protein L21e
1113Ribosomal protein L36e
1113Ribosomal protein L6e
3339Phosphatidylethanolamine-binding protein
1113
2226RIO1 family
1113Alanine racemase, N-terminal domain
1113Uncharacterized protein family UPF0016
2226PP-loop family
1113Shwachman-Bodian-Diamond syndrome (SBDS) protein
1113SNO glutamine amidotransferase family
1214Translation initiation factor 1A / IF-1
2237Asp/Glu/Hydantoin racemase
3249Copper amine oxidase, enzyme domain
2226Dihydroorotate dehydrogenase
1113Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
1113Glycosyl hydrolases family 25
4239GPR1/FUN34/yaaH family
112Macrophage migration inhibitory factor (MIF)
44412
222616S rRNA methyltransferase RsmB/F
1113RNA polymerase Rpb5, C-terminal domain
1113RNA polymerase Rpb6
44412RNA polymerase Rpb3/Rpb11 dimerisation domain
1113RNA polymerases N / 8 kDa subunit
1113Peptidyl-tRNA hydrolase
1113Ribosomal protein L17
11Ribosomal protein L31e
1113Ribosomal protein L34e
1113Ribosomal protein S28e
2226Ribosomal protein S8e
3126Shikimate kinase
2226Trehalase
2226Uncharacterized protein family UPF0029
44412Dihydrouridine synthase (Dus)
1113Uroporphyrinogen decarboxylase (URO-D)
44614ubiE/COQ5 methyltransferase family
1113NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
11Beta-eliminating lyase
1113Adenylate cyclase associated (CAP) N terminal
2226Casein kinase II regulatory subunit
1113Cytochrome c oxidase subunit Vb
44412Clathrin adaptor complex small chain
1113Coproporphyrinogen III oxidase
1113Dehydroquinase class II
1113Dynein light chain type 1
33511Ergosterol biosynthesis ERG4/ERG24 family
1113DNA/RNA non-specific endonuclease
2114GTP cyclohydrolase I
3328HIT domain
2248Indoleamine 2,3-dioxygenase
1113Mannitol dehydrogenase Rossmann domain
112Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain
54514Oxysterol-binding protein
2215Phosphomannose isomerase type I
2226Protein prenyltransferase alpha subunit repeat
55515Pyridoxamine 5'-phosphate oxidase
1236Membrane dipeptidase (Peptidase family M19)
1113Ribosomal protein L19
2226Ribosomal protein L24e
1113Ribosomal protein L35Ae
55515Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
1113Ribosomal protein S21e
1113Ribosomal protein S7e
2226Translation initiation factor SUI1
1113Putative undecaprenyl diphosphate synthase
1113Carbohydrate kinase
1113Thioredoxin-like [2Fe-2S] ferredoxin
1113SAICAR synthetase
2114Xylose isomerase-like TIM barrel
2226Alanine dehydrogenase/PNT, C-terminal domain
3339Aldose 1-epimerase
1113Chorismate synthase
2226Cytochrome c/c1 heme lyase
66618FAD dependent oxidoreductase
1113F-actin capping protein alpha subunit
1113Formate--tetrahydrofolate ligase
1124Fibrillarin
1113Malate synthase
1214Ribosomal protein L19e
1113Ribosomal protein S24e
1113Ribosomal protein S26e
1113Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold
11137,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
1113Phosphoenolpyruvate carboxykinase
112Ribosomal protein L13e
1113Telomere recombination
1113Glycosyl hydrolases family 35
44412CAP-Gly domain
1113
1113Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
44614DSBA-like thioredoxin domain
11Pyruvate phosphate dikinase, AMP/ATP-binding domain
1113Pterin 4 alpha carbinolamine dehydratase
1113mRNA capping enzyme, catalytic domain
66719OB-fold nucleic acid binding domain
1113Glycosyl hydrolases family 6
56617Kelch motif
1113Ribonuclease HII
453247124
11Tautomerase enzyme
55515FYVE zinc finger
112DHH family
44412Sec7 domain
3227NAD dependent epimerase/dehydratase family
2226Porphobilinogen deaminase, dipyromethane cofactor binding domain
2226SIS domain
1113Helix-turn-helix
1113Phosphate transporter family
3339ARID/BRIGHT DNA binding domain
112Collagen triple helix repeat (20 copies)
1113Chromo shadow domain
1113Clathrin propeller repeat
88824JAB1/Mov34/MPN/PAD-1 ubiquitin protease
12121337PCI domain
2114tRNA synthetases class I (C) catalytic domain
15112046Oxidoreductase family, NAD-binding Rossmann fold
2226tRNA synthetases class II core domain (F)
1113tRNA synthetases class II (A)
55515Putative GTPase activating protein for Arf
2226tRNA pseudouridine synthase
44412ENTH domain
11Reprolysin (M12B) family zinc metalloprotease
1113NF-X1 type zinc finger
16161648LSM domain
2338R3H domain
29143477Amidase
53412BAH domain
1113AN1-like Zinc finger
42511Peptidase family M3
33410Peptidase family M1 domain
2226Peptidase family M41
2226Peptidase family M48
1214Thermolysin metallopeptidase, catalytic domain
1113Acetohydroxy acid isomeroreductase, catalytic domain
1113Low molecular weight phosphotyrosine protein phosphatase
2226Eukaryotic porin
11Transglycosylase SLT domain
11GRIP domain
1113Skp1 family, dimerisation domain
44412Cytidylyltransferase-like
11Pyroglutamyl peptidase
3339PUA domain
1214Class-II DAHP synthetase family
881430LysM domain
44412S4 domain
1214PWI domain
1113Proprotein convertase P-domain
1091029IBR domain, a half RING-finger domain
3339Type I 3-dehydroquinase
3339Shikimate / quinate 5-dehydrogenase
11101233Transmembrane amino acid transporter protein
1113Frataxin-like domain
1113GXGXG motif
1081129FAD binding domain
1113
1113V-type ATPase 116kDa subunit family
3238Glycosyl transferase family 8
1113Phosphoribosyl-AMP cyclohydrolase
1113Phosphoribosyl-ATP pyrophosphohydrolase
3328Phosphatidylinositol-4-phosphate 5-Kinase
2215Phosphoadenosine phosphosulfate reductase family
2226TruB family pseudouridylate synthase (N terminal domain)
1113Respiratory-chain NADH dehydrogenase 51 Kd subunit
3339ATP-NAD kinase
2226Iron-sulphur cluster biosynthesis
64414Polysaccharide deacetylase
66618DHHC palmitoyltransferase
88824Glycosyl hydrolase family 47
76619PPR repeat
1113Adenosylmethionine decarboxylase
1113GIY-YIG catalytic domain
44412CorA-like Mg2+ transporter protein
66719Cation efflux family
981229Peptidase family M20/M25/M40
75618Acyltransferase
1113MatE
44412DnaJ C terminal domain
751022Fumarylacetoacetate (FAA) hydrolase family
11Pyruvate ferredoxin/flavodoxin oxidoreductase
1124Spermine/spermidine synthase domain
402743110FAD binding domain
1113Natural resistance-associated macrophage protein
65617PAP2 superfamily
2226Aminomethyltransferase folate-binding domain
3339MaoC like domain
2226Adenylylsulphate kinase
77822G-patch domain
1113Putative tRNA binding domain
2327GAF domain
33396-phosphofructo-2-kinase
1113NifU-like N terminal domain
84719Flavin containing amine oxidoreductase
1113Cyclin M transmembrane N-terminal domain
1124O-methyltransferase
112Glycine cleavage H-protein
44412
1113Ribosomal protein S27a
88824Adaptin N terminal region
1113Protein phosphatase 2A regulatory B subunit (B56 family)
1113I/LWEQ domain
32383'-5' exonuclease
1113Flavin reductase like domain
2125Proline dehydrogenase
44412MutS domain I
1113Peptide methionine sulfoxide reductase
1113Hpt domain
2226Choline/ethanolamine kinase
1113ATP phosphoribosyltransferase
1113Phosphotransferase enzyme family
1113SelR domain
33410Chitin synthase
1113Conserved region in glutamate synthase
22154'-phosphopantetheinyl transferase superfamily
1113Peptidase C13 family
3339Eukaryotic initiation factor 4E
1113Ribosomal protein L32
1113Myo-inositol-1-phosphate synthase
1113Macro domain
1113Type I phosphodiesterase / nucleotide pyrophosphatase
1113Ribosomal protein S27
2136Glycosyl hydrolase family 12
1113Metalloenzyme superfamily
3339Proteolipid membrane potential modulator
1113SOR/SNZ family
1113Riboflavin kinase
3328Rhomboid family
8101331Sodium/calcium exchanger protein
2226Queuine tRNA-ribosyltransferase
2226UTP--glucose-1-phosphate uridylyltransferase
1113Transcriptional regulator
3328Smr domain
1113IPP transferase
3339Cobalamin-independent synthase, Catalytic domain
3328BolA-like protein
1124Ham1 family
44412FtsJ-like methyltransferase
112Quinolinate phosphoribosyl transferase, C-terminal domain
1113Nucleoside transporter
67821Patatin-like phospholipase
3339Lysophospholipase catalytic domain
41611Dienelactone hydrolase family
55515STAS domain
1113Large-conductance mechanosensitive channel, MscL
1113Poly A polymerase head domain
1113ATP-sulfurylase
1113Importin beta binding domain
1113Toprim domain
79925MYND finger
3339Acyltransferase family
1124Sodium Bile acid symporter family
11133-dehydroquinate synthase
3339Lipase (class 3)
1113Ribosome recycling factor
1113Na+ dependent nucleoside transporter N-terminus
1113UreD urease accessory protein
1113Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A
112Ribosomal L22e protein family
112Ribosomal L27e protein family
1113Ribosomal L28e protein family
1113Ribosomal L29e protein family
1113Ribosomal L37ae protein family
1113Ribosomal L38e protein family
1113Ribosomal L32p protein family
1113NIF3 (NGG1p interacting factor 3)
1113Alternative oxidase
224DeoC/LacD family aldolase
3339Glycolipid 2-alpha-mannosyltransferase
13121439Ferric reductase like transmembrane component
3339snoRNA binding domain, fibrillarin
1113[2Fe-2S] binding domain
1113Surp module
1113AICARFT/IMPCHase bienzyme
11135-formyltetrahydrofolate cyclo-ligase family
1113ATP synthase subunit D
11Chorismate mutase type II
11101536WSC domain
54413Peptidase A4 family
1113IPT/TIG domain
1113FG-GAP repeat
1113Transglutaminase-like superfamily
55515ACT domain
2226DIL domain
1214FF domain
1225NAC domain
3328Proteasome/cyclosome repeat
3339MOZ/SAS family
2226Putative diphthamide synthesis protein
1113Domain of unknown function UPF0086
1113AMMECR1
1113RibD C-terminal domain
2226Domain found in IF2B/IF5
1113Memo-like protein
1113RNase P subunit p30
1113Iron-sulfur cluster assembly protein
1113RNA 2'-phosphotransferase, Tpt1 / KptA family
112Uncharacterised protein family UPF0047
1113DNA primase small subunit
1