PFAM Domains • Hyalopycnis blepharistoma ATCC 48560 v1.0
Annotations/GenomesAgahy1Chiap1Croqu1Eryha1Hetpy1Hyabl1Melli1Mellp1Mixos1Pucgr1Pucst1Rhoba1_1Rhomi1Rhosp1Sporo1Trisp1TotalAnnotation Description
PFAMs
5,7225,8025,9956,6725,5785,6216,7645,1325,5626,7846,2275,9496,1745,7284,2225,57793,509
111147 transmembrane receptor (rhodopsin family)
30323238333329273035263236332932507ATPase family associated with various cellular activities (AAA)
30332837283027282925283134303168517ABC transporter
454444744544444469ATP synthase alpha/beta family, nucleotide-binding domain
1111217EGF-like domain
13141213141412121317121313131413212Elongation factor Tu GTP binding domain
9117991077879710839130Helix-loop-helix DNA-binding domain
135341345231Hsp20/alpha crystallin family
87877797791378767124Hsp70 protein
8888888888898797128KH domain
1111111111111114SH2 domain
23222319252327252028262122231720364SH3 domain
9109999851099999710140Actin
17181520171715141716161820171316266Ankyrin repeat
2518PAN domain
7799779768878777120ADP-ribosylation factor family
1112191413132123381614111312126248Eukaryotic aspartyl protease
333333323323333346Cyclic nucleotide-binding domain
1214Cytochrome b(C-terminal)/b6/petD
1124Cytochrome b/b6/petB
111111111111111116Cytochrome c
1112112111121117Double-stranded RNA binding motif
20161619161615221521211418131715274EF hand
1111112112221111204Fe-4S binding domain
111111111121114Fibronectin type III domain
112Globin
7661344549861010659112Glutathione S-transferase, C-terminal domain
111211221122121122Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
8878885278655645100Homeodomain
1111116Laminin EGF domain
232222232222222234lactate/malate dehydrogenase, NAD binding domain
554556535575555681Myosin head (motor domain)
132426261012202314162011247631283Cytochrome P450
10814312610514214812411895112124991059892951,834Protein kinase domain
1111101511118810861313121110168Pyridine nucleotide-disulphide oxidoreductase
25252622252621302425232425212426392Ras family
11149171415101015914151616124201Response regulator receiver domain
26262227612195515154RNase H
555969626466647057857355605252591,002RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
32730Retroviral aspartyl protease
15111265Reverse transcriptase (RNA-dependent DNA polymerase)
13123215101240Copper/zinc superoxide dismutase (SODC)
22211143112111225Iron/manganese superoxide dismutases, alpha-hairpin domain
459355109514113333597Subtilase family
34152236222420291316213021344217396Sugar (and other) transporter
11109111111118881513111169163Thioredoxin
4454551053565354679Tubulin/FtsZ family, GTPase domain
2224311122222von Willebrand factor type A domain
30434544353545793152412832332637636Zinc finger, C2H2 type
344041453134323635110753340351430665Zinc finger, C3HC4 type (RING finger)
91742141611245488142489148915655Zinc knuckle
232255212252221341Protein-tyrosine phosphatase
51492784293026315029264569443142663short chain dehydrogenase
22331240191711131911123137263127361Zinc-binding dehydrogenase
347545654457666784Thiolase, N-terminal domain
112111111211111522Beta-ketoacyl synthase, N-terminal domain
5433442332244444552Fe-2S iron-sulfur cluster binding domain
151111111111121121Enolase, C-terminal TIM barrel domain
1146Cytochrome C and Quinol oxidase polypeptide I
1113Cytochrome C oxidase subunit II, periplasmic domain
6778887787687767114Glutamine amidotransferase class-I
911101010111291112149109910166TCP-1/cpn60 chaperonin family
11114ATP synthase A chain
223322343342312140Glutamine synthetase, catalytic domain
121111211111111219Triosephosphate isomerase
8910121212913121017101491012179E1-E2 ATPase
22Photosynthetic reaction centre protein
15131620292021191124151918172213292Core histone H2A/H2B/H3/H4
11114Copper binding proteins, plastocyanin/azurin family
135833662432743161Alpha amylase, catalytic domain
253334334512511348Phorbol esters/diacylglycerol binding domain (C1 domain)
638755785877665598Bacterial transferase hexapeptide (six repeats)
223333453583336561tRNA synthetases class I (I, L, M and V)
11881098141291069101189152Cyclin, N-terminal domain
33106910132386795953129Carboxylesterase family
444444444664444468DNA polymerase family B
334333344323334452ATP synthase subunit C
112Legume lectin domain
112222222222222129Peroxidase
21722334630Beta-lactamase
222222322120C-5 cytosine-specific DNA methylase
2215NADH dehydrogenase
21182220181718181917181720201418295Calcineurin-like phosphoesterase
236111187398262372Cellulase (glycosyl hydrolase family 5)
554544444474544875tRNA synthetases class II (D, K and N)
33343341333431323434413537363436558Mitochondrial carrier protein
16161614151514111315171715171511237Aminotransferase class I and II
6667666578967667104Phosphoribosyl transferase domain
13171211131315141114131211111113204Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
111111111111111116Phosphoglycerate kinase
222222322221222232Ribosomal protein S4/S9 N-terminal domain
222222232322222234Ribosomal protein S12/S23
112Bacterial regulatory helix-turn-helix proteins, AraC family
111111211111111117Chaperonin 10 Kd subunit
13131091415101013710101011812175C2 domain
20192013202020142018151818181220285PH domain
76459103475310784698bZIP transcription factor
1010131812111412812181112111110193Aldehyde dehydrogenase family
52303363544627342924196357452348647Fungal Zn(2)-Cys(6) binuclear cluster domain
17161823171816152119212121191821301Cytochrome b5-like Heme/Steroid binding domain
14112221519Oxidoreductase molybdopterin binding domain
6769776776577657105Oxidoreductase NAD-binding domain
18211719202027301658272219221718371SNF2 family N-terminal domain
212222222221222230Ribosomal protein S7p/S5e
17182018171718191917182016191719289Ubiquitin-conjugating enzyme
555555655265575581Isocitrate/isopropylmalate dehydrogenase
222222222212222231Ribosomal Proteins L2, RNA binding domain
222222323122232234Hsp90 protein
222222522242223238Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
111111111121111117Dihydrofolate reductase
1113Chitin recognition protein
541024551037623369Cysteine-rich secretory protein family
111111311211111119Ribosomal protein S3, C-terminal domain
111115Cupin
11114Annexin
2226Eukaryotic-type carbonic anhydrase
2232334533442343502-oxoacid dehydrogenases acyltransferase (catalytic domain)
235311482653321150Catalase
112111121231111121Disintegrin
1416UDP-glucoronosyl and UDP-glucosyl transferase
7657664451155855594Aminotransferase class-III
22222322222222231Ribosomal protein S19
111111111211111117DNA gyrase B
342511442114443346Thiamine pyrophosphate enzyme, central domain
333333533323333349Lyase
121222112112222125Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
112Sodium:neurotransmitter symporter family
111122111111111118Adenylate and Guanylate cyclase catalytic domain
111111111111111116ATP synthase delta (OSCP) subunit
111111111111111116Orotidine 5'-phosphate decarboxylase / HUMPS family
211111111112121119Indole-3-glycerol phosphate synthase
11Neurohypophysial hormones, N-terminal Domain
4111221221111121Aromatic amino acid lyase
33Photosystem I psaA/psaB protein
111111211111111117Pyruvate kinase, barrel domain
98118998117131288886143Kinesin motor domain
26283329242233502532322731272225466DnaJ domain
14141914141514141415131514131414230Proteasome subunit
2313103315168101259852124Major intrinsic protein
111111111121111117ATP synthase
111115Glycosyl hydrolase family 1
11111111111111143'5'-cyclic nucleotide phosphodiesterase
111112111111111117Profilin
112111221111111220Ribosomal protein L22p/L17e
222222322212222232Ribosomal protein L14p/L23e
1210111610101411999151414117182Ubiquitin family
454445525345442464Cofilin/tropomyosin-type actin-binding protein
22222252222222213414-3-3 protein
222411223323332338Alkaline phosphatase
1111121111314Zinc carboxypeptidase
2223921101016121012101821141312233Aldo/keto reductase family
121012101412111077111181169161Myb-like DNA-binding domain
575444333222421354Forkhead domain
14132122111120Glycosyl hydrolases family 32 N-terminal domain
121111211111111118Ribosomal protein L16p/L10e
222222111222221228Ribosomal protein S14p/S29e
445533544343433259FKBP-type peptidyl-prolyl cis-trans isomerase
111111111111111116Glutathione peroxidase
111211221111111220
464466553554443775Flavodoxin
11Protamine P1
11Tropomyosin
131111111111111118Calreticulin family
852116Common central domain of tyrosinase
554555535645553373Aminotransferase class-V
221111112112122223Ribonucleotide reductase, small chain
36453639394038453969484138414735676DEAD/DEAH box helicase
64726372707197916315812075667367651,287Helicase conserved C-terminal domain
11Fructose-bisphosphate aldolase class-I
111111111321111119EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
211222111112222225Ribosomal protein L23
111111311111111118Pyridoxal-dependent decarboxylase, C-terminal sheet domain
111122111111111118Ribosomal protein L5
565633455215555570Pyridoxal-dependent decarboxylase conserved domain
122222222222212230Citrate synthase, C-terminal domain
554556655655554480GHMP kinases N terminal domain
455455765556466785Biotin carboxylase, N-terminal domain
11111122122111220Tryptophan synthase alpha chain
77686696781078659115Pyridoxal-phosphate dependent enzyme
1114121310101215121012914111114190NUDIX domain
455533334544443463pfkB family carbohydrate kinase
11311119Glycosyl hydrolases family 28
232222322222222234Ribosomal protein L3
222211122112212226Ribosomal protein L11, RNA binding domain
1313727998610138101111513173Histidine phosphatase superfamily (branch 1)
111111111141111119Thymidylate synthase
22Lipoxygenase
454444844514454468ATP synthase alpha/beta chain, C terminal domain
445444543554444467Calponin homology (CH) domain
446544645744554475Glutamine amidotransferases class-II
222232321232222234Ribosomal protein S15
21322233132324235'Cold-shock' DNA-binding domain
32333217443439Thaumatin family
112111111121111118Fructose-1-6-bisphosphatase, N-terminal domain
21111121111111117Ribonucleotide reductase, all-alpha domain
222222322332222235Ribosomal protein S2
333344233224333954SRF-type transcription factor (DNA-binding and dimerisation domain)
101178101166877861077129GATA zinc finger
1481914212314171220151811171611250Amino acid permease
544355526446553571Prolyl oligopeptidase family
112111112111111219Ribosomal protein L30p/L7e
645644438577574382Histidine phosphatase superfamily (branch 2)
111111111111111116Respiratory-chain NADH dehydrogenase, 30 Kd subunit
444544544464444468Aconitase family (aconitate hydratase)
6455424Glycosyl hydrolase family 10
111221111112Glycosyl hydrolases family 17
222222222222222232Ribosomal protein S5, N-terminal domain
113222222112222128Nucleoside diphosphate kinase
11114Tetraspanin family
11111211111112117Ribosomal protein S10p/S20e
355442114531240Arrestin (or S-antigen), N-terminal domain
112111111111111117Phosphoglucose isomerase
111111111110Carbohydrate phosphorylase
111111111111111116SecY translocase
111111211111111117Respiratory-chain NADH dehydrogenase, 49 Kd subunit
222222122322222232Ribosomal protein L6
333333663463333459Polyprenyl synthetase
222223232422222236Hexokinase
544454233663334362Dynamin family
11Biopterin-dependent aromatic amino acid hydroxylase
121111111111111218Transcription factor TFIID (or TATA-binding protein, TBP)
453622344335442155Rieske [2Fe-2S] domain
111111118Phytochrome region
234211Proton-conducting membrane transporter
56757710977885889116Biotin-requiring enzyme
111111121151111121Phosphofructokinase
222222212222221230Ribosomal protein S17
111111111131111118Hydroxymethylglutaryl-coenzyme A reductase
333422322332222240FGGY family of carbohydrate kinases, N-terminal domain
11114Sodium:dicarboxylate symporter family
48867711988987778122Enoyl-CoA hydratase/isomerase
222222222222221231Ribosomal protein S9/S16
325322222322322239Transcription factor TFIIB repeat
555766355527654581Cytidine and deoxycytidylate deaminase zinc-binding region
111211111132121121Molybdopterin oxidoreductase
6675522131834543487Chromo (CHRromatin Organisation MOdifier) domain
22111111111111218Phosphatidylinositol-specific phospholipase C, Y domain
24212222121111226Phosphatidylinositol-specific phospholipase C, X domain
9531267234116765683D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
11122211212122122Malic enzyme, N-terminal domain
2112112111212111216-phosphogluconate dehydrogenase, C-terminal domain
422023371811292241191Multicopper oxidase
9798668776678686114WW domain
111211111122222122Ribosomal RNA adenine dimethylase
9810497105979799105101106109105101104951051,628WD domain, G-beta repeat
122444223222622545Heavy-metal-associated domain
333433553443333355Adenylate kinase
221211222212222228Phosphoglucomutase/phosphomannomutase, C-terminal domain
221111112211222224Ribosomal protein S8
111111211211121119Ribosomal protein S11
656554564665643581LIM domain
11Matrixin
432122324124122338Regulator of chromosome condensation (RCC1) repeat
222223122222232233Ribosomal protein S13/S18
11
1214NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
11Photosystem II protein
11REV protein (anti-repression trans-activator protein)
112122222422122129chorismate binding enzyme
33333343323333334860s Acidic ribosomal protein
546477784973444487Prenyltransferase and squalene oxidase repeat
65757796589655