PFAM Domains • Verruculina enalia CBS 304.66 v1.0
Annotations/GenomesAmnli1Karrh1Lenfl1Melpu1Plesi1Spofi1Trepe1Veren1TotalAnnotation Description
PFAMs
9,4209,56610,23510,4998,7517,24510,3829,03575,133
11137 transmembrane receptor (rhodopsin family)
5557535242417653429ATPase family associated with various cellular activities (AAA)
5047555442335352386ABC transporter
4444444432ATP synthase alpha/beta family, nucleotide-binding domain
1211117EGF-like domain
1514141414141414113Elongation factor Tu GTP binding domain
13101410108121188Helix-loop-helix DNA-binding domain
3333323424Hsp20/alpha crystallin family
7889878762Hsp70 protein
10798898867KH domain
111111118SH2 domain
2223242326222423187SH3 domain
101110111010101082Actin
113811801365936119113837Ankyrin repeat
5434553130PAN domain
7978878761ADP-ribosylation factor family
1291111109161593Eukaryotic aspartyl protease
4444444432Cyclic nucleotide-binding domain
11Cytochrome b/b6/petB
111111118Cytochrome c
1211122313Double-stranded RNA binding motif
2017182018141718142EF hand
1111111184Fe-4S binding domain
3326323224Fibronectin type III domain
111121119Globin
181722191471610123Glutathione S-transferase, C-terminal domain
111111118Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
97878810966Homeodomain
3434333427lactate/malate dehydrogenase, NAD binding domain
11Low-density lipoprotein receptor repeat class B
5445544536Myosin head (motor domain)
135158184185119521861271,146Cytochrome P450
1961271721711201042541381,282Protein kinase domain
2318212219112121156Pyridine nucleotide-disulphide oxidoreductase
2425262625232824201Ras family
2423232223192017171Response regulator receiver domain
521325119RNase H
6060626364616560495RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
3333332222Copper/zinc superoxide dismutase (SODC)
2222222216Iron/manganese superoxide dismutases, alpha-hairpin domain
171415171091311106Subtilase family
7192839678359167613Sugar (and other) transporter
111313121110111293Thioredoxin
1633211219Trypsin
4444444432Tubulin/FtsZ family, GTPase domain
5363335634von Willebrand factor type A domain
7162698058578765549Zinc finger, C2H2 type
87696468616010251562Zinc finger, C3HC4 type (RING finger)
94957119761Zinc knuckle
4222223219Protein-tyrosine phosphatase
164171187231149851851601,332short chain dehydrogenase
73739310160438577605Zinc-binding dehydrogenase
6766666750Thiolase, N-terminal domain
272035461692238213Beta-ketoacyl synthase, N-terminal domain
68766476502Fe-2S iron-sulfur cluster binding domain
111126Papain family cysteine protease
111111219Enolase, C-terminal TIM barrel domain
11Cytochrome C and Quinol oxidase polypeptide I
89810888867Glutamine amidotransferase class-I
101010101010101080TCP-1/cpn60 chaperonin family
3334333325Glutamine synthetase, catalytic domain
2222222216Triosephosphate isomerase
1714181813151719131E1-E2 ATPase
7778887759Core histone H2A/H2B/H3/H4
1111217Copper binding proteins, plastocyanin/azurin family
871013103101172Alpha amylase, catalytic domain
221222314Phorbol esters/diacylglycerol binding domain (C1 domain)
8788767758Bacterial transferase hexapeptide (six repeats)
3345333327tRNA synthetases class I (I, L, M and V)
7787767655Cyclin, N-terminal domain
2732344040123121237Carboxylesterase family
4444444432DNA polymerase family B
4444444432ATP synthase subunit C
791375610865Peroxidase
10172026125249123Beta-lactamase
4423433326C-5 cytosine-specific DNA methylase
3228263026252926222Calcineurin-like phosphoesterase
121613151261511100Cellulase (glycosyl hydrolase family 5)
7778787758tRNA synthetases class II (D, K and N)
4140424140384340325Mitochondrial carrier protein
11recA bacterial DNA recombination protein
1922202218141922156Aminotransferase class I and II
89999891071Phosphoribosyl transferase domain
11911101010101182Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
111111118Phosphoglycerate kinase
2222222216Ribosomal protein S4/S9 N-terminal domain
2222222216Ribosomal protein S12/S23
111111118Bacterial regulatory helix-turn-helix proteins, AraC family
111111118Chaperonin 10 Kd subunit
121314101011121193C2 domain
1819202118191820153PH domain
898119681069bZIP transcription factor
2023212419142622169Aldehyde dehydrogenase family
204235241290194962341831,677Fungal Zn(2)-Cys(6) binuclear cluster domain
2323242523212419182Cytochrome b5-like Heme/Steroid binding domain
3433233324Oxidoreductase molybdopterin binding domain
1618171717141616131Oxidoreductase NAD-binding domain
2628323025232624214SNF2 family N-terminal domain
2222222216Ribosomal protein S7p/S5e
2424232422222625190Ubiquitin-conjugating enzyme
7887766655Isocitrate/isopropylmalate dehydrogenase
2222222216Ribosomal Proteins L2, RNA binding domain
111111118Hsp90 protein
2222222216Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
111111118Dihydrofolate reductase
11671141871074Chitin recognition protein
3445323327Cysteine-rich secretory protein family
111111118Ribosomal protein S3, C-terminal domain
5664437439Cupin
2222222216Annexin
1222112112Eukaryotic-type carbonic anhydrase
1113Chalcone and stilbene synthases, N-terminal domain
33333333242-oxoacid dehydrogenases acyltransferase (catalytic domain)
5264246534Catalase
111111118Disintegrin
1214UDP-glucoronosyl and UDP-glucosyl transferase
101088959766Aminotransferase class-III
2222222216Ribosomal protein S19
111111118DNA gyrase B
6779858555Thiamine pyrophosphate enzyme, central domain
4444444432Lyase
2222222216Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
12111129Sodium:neurotransmitter symporter family
111111118Adenylate and Guanylate cyclase catalytic domain
111111118ATP synthase delta (OSCP) subunit
211111119Orotidine 5'-phosphate decarboxylase / HUMPS family
111111118Indole-3-glycerol phosphate synthase
123212213Aromatic amino acid lyase
111111118Pyruvate kinase, barrel domain
10111211111010984Kinesin motor domain
3636383132374331284DnaJ domain
1414141414141414112Proteasome subunit
68867410554Major intrinsic protein
111111118ATP synthase
2633323325Glycosyl hydrolase family 1
1111111183'5'-cyclic nucleotide phosphodiesterase
111111118Profilin
111111118Ribosomal protein L22p/L17e
2222222216Ribosomal protein L14p/L23e
13141210109121292Ubiquitin family
4555554639Cofilin/tropomyosin-type actin-binding protein
222222221614-3-3 protein
5646545641Alkaline phosphatase
6676763445Zinc carboxypeptidase
2841363928184330263Aldo/keto reductase family
1414181312151813117Myb-like DNA-binding domain
4444444432Forkhead domain
344222118Glycosyl hydrolases family 32 N-terminal domain
111111118Ribosomal protein L16p/L10e
2332334323Ribosomal protein S14p/S29e
4544544434FKBP-type peptidyl-prolyl cis-trans isomerase
111111118Glutathione peroxidase
211111119
77810858760Flavodoxin
112Protamine P1
111111118Calreticulin family
2018131514211313127Common central domain of tyrosinase
68810778862Aminotransferase class-V
111111118Ribonucleotide reductase, small chain
3639404042384037312DEAD/DEAH box helicase
6977807782697669599Helicase conserved C-terminal domain
111111118EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
2212222215Ribosomal protein L23
111111118Pyridoxal-dependent decarboxylase, C-terminal sheet domain
2222222216Ribosomal protein L5
6768767653Pyridoxal-dependent decarboxylase conserved domain
2332223219Citrate synthase, C-terminal domain
5556556643GHMP kinases N terminal domain
7767667753Biotin carboxylase, N-terminal domain
111111118Tryptophan synthase alpha chain
1011121089111384Pyridoxal-phosphate dependent enzyme
1616161417131915126NUDIX domain
5665569749pfkB family carbohydrate kinase
101277109358Glycosyl hydrolases family 28
12115Luciferase-like monooxygenase
2222222216Ribosomal protein L3
2222223217Ribosomal protein L11, RNA binding domain
1612151514131716118Histidine phosphatase superfamily (branch 1)
111111118Thymidylate synthase
1113Lipoxygenase
4444444432ATP synthase alpha/beta chain, C terminal domain
5555445538Calponin homology (CH) domain
4564544537Glutamine amidotransferases class-II
2222222216Ribosomal protein S15
11'Cold-shock' DNA-binding domain
111111118Thaumatin family
2222212215Fructose-1-6-bisphosphatase, N-terminal domain
111111118Ribonucleotide reductase, all-alpha domain
2222222216Ribosomal protein S2
1221222214SRF-type transcription factor (DNA-binding and dimerisation domain)
6767667752GATA zinc finger
5347485648365841387Amino acid permease
5566655543Prolyl oligopeptidase family
2233332220Ribosomal protein L30p/L7e
11121313116121088Histidine phosphatase superfamily (branch 2)
111111118Respiratory-chain NADH dehydrogenase, 30 Kd subunit
5544544435Aconitase family (aconitate hydratase)
5554345435Glycosyl hydrolase family 10
3233333424Glycosyl hydrolases family 17
2222222216Ribosomal protein S5, N-terminal domain
111111118Nucleoside diphosphate kinase
111111118Ribosomal protein S10p/S20e
5667745747Arrestin (or S-antigen), N-terminal domain
111111118Phosphoglucose isomerase
111111118Carbohydrate phosphorylase
111111118SecY translocase
111111118Respiratory-chain NADH dehydrogenase, 49 Kd subunit
2222222216Ribosomal protein L6
3333434326Polyprenyl synthetase
5654555439Hexokinase
108610766962Dynamin family
11Biopterin-dependent aromatic amino acid hydroxylase
111111129Transcription factor TFIID (or TATA-binding protein, TBP)
5665546441Rieske [2Fe-2S] domain
2114Phytochrome region
8989889968Biotin-requiring enzyme
111111118Phosphofructokinase
1222222215Ribosomal protein S17
111111118Hydroxymethylglutaryl-coenzyme A reductase
3333333324FGGY family of carbohydrate kinases, N-terminal domain
11114Sodium:dicarboxylate symporter family
1114141514121411105Enoyl-CoA hydratase/isomerase
2222222216Ribosomal protein S9/S16
2222222216Transcription factor TFIIB repeat
7897758859Cytidine and deoxycytidylate deaminase zinc-binding region
111111118Molybdopterin oxidoreductase
6474668647Chromo (CHRromatin Organisation MOdifier) domain
3333333324Phosphatidylinositol-specific phospholipase C, Y domain
3333443326Phosphatidylinositol-specific phospholipase C, X domain
97111211812979D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
2222222216Malic enzyme, N-terminal domain
12211222136-phosphogluconate dehydrogenase, C-terminal domain
131215201441713108Multicopper oxidase
1312101091110984WW domain
111111118Ribosomal RNA adenine dimethylase
1222122214Yeast PIR protein repeat
110105160117103103111131940WD domain, G-beta repeat
5555545640Heavy-metal-associated domain
5454346334Adenylate kinase
2333322220Phosphoglucomutase/phosphomannomutase, C-terminal domain
2122222215Ribosomal protein S8
2222111314Ribosomal protein S11
4445444534LIM domain
2132113215Matrixin
2111122111Regulator of chromosome condensation (RCC1) repeat
2122222215Ribosomal protein S13/S18
2332222218chorismate binding enzyme
444443443160s Acidic ribosomal protein
4455445435Prenyltransferase and squalene oxidase repeat
5656667748Protein kinase C terminal domain
111111118Single-strand binding protein family
111111118S-adenosylmethionine synthetase, N-terminal domain
8688887962Bromodomain
1610151816141614119Acyl-CoA dehydrogenase, C-terminal domain
1517141615151415121Ubiquitin carboxyl-terminal hydrolase
111111118Ribosomal protein L36
2222212215Ribonuclease T2 family
11Gonadotropin-releasing hormone
2433333324HSF-type DNA-binding
2222222216SRP54-type protein, GTPase domain
111111118Urease alpha-subunit, N-terminal domain
14121113114131290Serine carboxypeptidase
112Apoptosis regulator proteins, Bcl-2 family
8888888864Phosphatidylinositol 3- and 4-kinase
2432314322Transketolase, thiamine diphosphate binding domain
4545545335Glycosyl hydrolases family 11
5555535437Inositol monophosphatase family
4444444432Glutaredoxin
3545534231Isocitrate lyase family
2232223218Serine hydroxymethyltransferase
4344434329Iron-containing alcohol dehydrogenase
2222222216Ribosomal protein L10
5233334528KOW motif
111111118Ribosomal protein L34
2222122215RF-1 domain
3627623332Sodium:solute symporter family
121111119Imidazoleglycerol-phosphate dehydratase
111111118DNA polymerase family A
111111118IMP dehydrogenase / GMP reductase domain
111111118Glucose-6-phosphate dehydrogenase, NAD binding domain
6666656647Protein phosphatase 2C
3333334325Nucleotidyl transferase
3344234326Carbonic anhydrase
111111118Phosphoribulokinase / Uridine kinase family
57911847556Fatty acid desaturase
6666666648MutS domain V
111111118Delta-aminolevulinic acid dehydratase
4655534436Arginase family
6666666648MCM P-loop domain
2223222318Squalene/phytoene synthase
112Bacterial extracellular solute-binding proteins, family 5 Middle
11Bacterial extracellular solute-binding proteins, family 3
108699911769FHA domain
4749575947385353403AMP-binding enzyme
4465445537G-protein alpha subunit
7897788862HMG (high mobility group) box
11NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
2121201920161615148His Kinase A (phospho-acceptor) domain
3333533326Armadillo/beta-catenin-like repeat
2321393226233535234Tetratricopeptide repeat
4345425431Ion transport protein
111111118DNA gyrase/topoisomerase IV, subunit A
131214121211131299BRCA1 C Terminus (BRCT) domain
8787767757Glycosyl transferases group 1
4537233431Glycosyl transferase family 2
2433234425SAM domain (Sterile alpha motif)
11111117linker histone H1 and H5 family
111111118Ribosomal protein L7/L12 C-terminal domain
5865623237Pectate lyase
11211118ribonuclease
111111118Urease, gamma subunit
4444444432CoA-ligase
1819313015112334181Phosphopantetheine attachment site
3333333324Formyl transferase
9989989970Metallopeptidase family M24
1212151515151413111Leucine Rich Repeat
3960465338315142360alpha/beta hydrolase fold
3333334325RNA polymerase Rpb2, domain 6
4344343429PB1 domain
2222222216Staphylococcal nuclease homologue
121112111112111292Rab-GTPase-TBC domain
112111119Tudor domain
111111118WH1 domain
4535433330Zinc finger, ZZ type
3343333123HRDC domain
1091099109975CBS domain
2222222216Ribosomal protein L13
2222222216Ribosomal protein L4/L1 family
111111118Clp protease
2424432324S1 RNA binding domain
111111118HIUase/Transthyretin family
7575347644AhpC/TSA family
4445445434tRNA synthetases class I (W and Y)
111211119UvrD/REP helicase N-terminal domain
6475566746Rhodanese-like domain
2222122215Universal stress protein family
5154515538285457388Acetyltransferase (GNAT) family
111111118SecE/Sec61-gamma subunits of protein translocation complex
111111118C-terminal regulatory domain of Threonine dehydratase
2222222216AIR synthase related protein, N-terminal domain
8888888864tRNA synthetase class II core domain (G, H, P, S and T)
2222222216SpoU rRNA Methylase family
2222222216Tetrapyrrole (Corrin/Porphyrin) Methylases
1221112111Glycosyl transferase family, a/b domain
111111118PDZ domain
7679768656Class II Aldolase and Adducin N-terminal domain
4343344429Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
5554455538Fes/CIP4, and EFC/F-BAR homology domain
4434564535IQ calmodulin-binding motif
2222222216Phosphoinositide 3-kinase family, accessory domain (PIK domain)
5556655542Phospholipase D Active site motif
11111117Regulator of G protein signaling domain
3333333324GTPase-activator protein for Ras-like GTPase
4444444432RasGEF domain
4444444432RasGEF N-terminal motif
9888888865RhoGAP domain
6665667648RhoGEF domain
5322233323SPRY domain
3333333324RNA polymerase Rpb1, domain 2
1112112110Guanylate kinase
4444444533Gelsolin repeat
81091191110977UBA/TS-N domain
1718182017161917142PHD-finger
111111118GGL domain
5555545539HECT-domain (ubiquitin-transferase)
1222231215Helix-hairpin-helix motif
111111118MSP (Major sperm protein) domain
6764767649Ribonuclease III domain
2222322217Region in Clathrin and VPS
2222222216RanBP1 domain
2222222216PPIC-type PPIASE domain
121111119Zn-finger in Ran binding protein and others
2028162222142318163Zinc finger C-x8-C-x5-C-x3-H type (and similar)
3233323221Poly(ADP-ribose) polymerase catalytic domain
1222122113Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
931018396786813170720F-box domain
111111118Elongation factor 1 gamma, conserved domain
3343333325Calpain family cysteine protease
2223221216Copper fist DNA binding domain
6555555541CRAL/TRIO domain
1726262117133911170BTB/POZ domain
2113213114Ricin-type beta-trefoil lectin domain
111111118Inhibitor of Apoptosis domain
4344434430Voltage gated chloride channel
4253214425Caspase domain
1320141715131711120GDSL-like Lipase/Acylhydrolase
111111118Poly-adenylate binding protein, unique domain
11211219POLO box duplicated region
2423232819142324178ABC transporter transmembrane region
97811858763FAD binding domain
10119107391574Condensation domain
111111118S-adenosyl-L-homocysteine hydrolase, NAD binding domain
111111118HAMP domain
2222222216ribosomal L5P family C-terminus
5556675544Insulinase (Peptidase family M16)
3333333324Dehydrogenase E1 component
111111118Lumazine binding domain
6766666649Elongation factor G C-terminus
4544444433HMGL-like
4445544434DnaJ central domain
1435524327Starch binding domain
2333323322Ribosomal protein L1p/L10e family
96109589864Cation transporting ATPase, C-terminus
971110767865Cation transporter/ATPase, N-terminus
121111119dUTPase
5544544435Aconitase C-terminal domain
4334433630Amino acid kinase family
111111118N-(5'phosphoribosyl)anthranilate (PRA) isomerase
241833411492036195Acyl transferase domain
111111118Urease beta subunit
7878657452Dihydrodipicolinate synthetase family
3432393733293834276haloacid dehalogenase-like hydrolase
5667728849Glycosyl hydrolases family 2
1813131114131312107Glycosyl hydrolases family 18
111111118Proliferating cell nuclear antigen, N-terminal domain
111111118Acylphosphatase
111111118Adenylosuccinate synthetase
3223313320Asparaginase, N-terminal
3221122215Peptidase S24-like
111111129Inorganic pyrophosphatase
711109108111076Glycosyl hydrolases family 16
3434414326Glycosyl hydrolases family 15
8959747655NADH:flavin oxidoreductase / NADH oxidase family
23122322173-hydroxyacyl-CoA dehydrogenase, C-terminal domain
3434324427Glycosyl hydrolase family 20, catalytic domain
4655464438HhH-GPD superfamily base excision DNA repair protein
111111118AIR carboxylase
3129323121123323212GMC oxidoreductase
2332222319Asparagine synthase
101310912914885Fungal cellulose binding domain
6666665647Septin
111111118EF-1 guanine nucleotide exchange domain
111111118Homoserine dehydrogenase
1423222218Flavin-binding monooxygenase-like
11LPXTG cell wall anchor motif
3333333324tRNA synthetases class I (E and Q), catalytic domain
3232314220tRNA synthetases class I (R)
5445344433XPG N-terminal domain
1013141596161295Metallo-beta-lactamase superfamily
221321213F5/8 type C domain
3323232321Choline/Carnitine o-acyltransferase
111111118Putative esterase
111111118Ferrochelatase
2222222216Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
1121111