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PFAM Domains • Pochonia chlamydosporia 170
Annotations/GenomesBeaba1Cormi1Metac1Metro1Myrin1Nieex1Pocchl1Pursp1Trire2TotalAnnotation Description
PFAMs
8,3477,7688,00511,60510,07810,40612,80511,3356,50786,856
21147 transmembrane receptor (rhodopsin family)
222177 transmembrane receptor (Secretin family)
434243475150424244404ATPase family associated with various cellular activities (AAA)
827151597265717046587ABC transporter
54464434438ATP synthase alpha/beta family, nucleotide-binding domain
141413151413151514127Elongation factor Tu GTP binding domain
1010121110101710999Helix-loop-helix DNA-binding domain
32544264333Hsp20/alpha crystallin family
87713781314784Hsp70 protein
99889978875KH domain
1111116SH2 domain
212123132121181224174SH3 domain
10991010101010785Actin
8353823911578672863608Ankyrin repeat
333111214PAN domain
88787788768ADP-ribosylation factor family
252622321425242416208Eukaryotic aspartyl protease
43444444435Cyclic nucleotide-binding domain
1111111119Cytochrome c
111221210Double-stranded RNA binding motif
151515117162420105EF hand
22211111114Fe-4S binding domain
22212211114Fibronectin type III domain
11442123220Globin
151113121521151010122Glutathione S-transferase, C-terminal domain
11112111110Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
97869845561Homeodomain
11Kazal-type serine protease inhibitor domain
33332325226lactate/malate dehydrogenase, NAD binding domain
112228Lipocalin / cytosolic fatty-acid binding protein family
55555454442Myosin head (motor domain)
7553861221841491059069933Cytochrome P450
1291421451581311161611291061,217Protein kinase domain
161517161728191814160Pyridine nucleotide-disulphide oxidoreductase
242323242826232623220Ras family
141212132014181513131Response regulator receiver domain
7141534171254RNase H
565555536058515559502RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
11Retroviral aspartyl protease
135213473Reverse transcriptase (RNA-dependent DNA polymerase)
1124Serpin (serine protease inhibitor)
21142243221Copper/zinc superoxide dismutase (SODC)
22222222218Iron/manganese superoxide dismutases, alpha-hairpin domain
281931573424384415290Subtilase family
485056647712711310676717Sugar (and other) transporter
141413151515151411126Thioredoxin
171013365683199Trypsin
85555444646Tubulin/FtsZ family, GTPase domain
55564227von Willebrand factor type A domain
544347187768142567413Zinc finger, C2H2 type
343225440375532214Zinc finger, C3HC4 type (RING finger)
11810876143572Zinc knuckle
21222222217Protein-tyrosine phosphatase
757281841822641051071181,088short chain dehydrogenase
44495051106138655553611Zinc-binding dehydrogenase
43555675646Thiolase, N-terminal domain
191622385639271717251Beta-ketoacyl synthase, N-terminal domain
553276335392Fe-2S iron-sulfur cluster binding domain
11111121110Enolase, C-terminal TIM barrel domain
22Cytochrome C and Quinol oxidase polypeptide I
981099101013785Glutamine amidotransferase class-I
1010109101010101089TCP-1/cpn60 chaperonin family
32446464235Glutamine synthetase, catalytic domain
22222222218Triosephosphate isomerase
202021281917292916199E1-E2 ATPase
76879768765Core histone H2A/H2B/H3/H4
44556968451Alpha amylase, catalytic domain
22323222220Phorbol esters/diacylglycerol binding domain (C1 domain)
109108101298884Bacterial transferase hexapeptide (six repeats)
43564487647tRNA synthetases class I (I, L, M and V)
66578787761Cyclin, N-terminal domain
111013162043342012179Carboxylesterase family
44444444436DNA polymerase family B
56665565448ATP synthase subunit C
43446784646Peroxidase
22192019122132248177Beta-lactamase
22223222118C-5 cytosine-specific DNA methylase
11Nitrogenase component 1 type Oxidoreductase
343936303125353127288Calcineurin-like phosphoesterase
45788131010469Cellulase (glycosyl hydrolase family 5)
88997877871tRNA synthetases class II (D, K and N)
383741454241424035361Mitochondrial carrier protein
11recA bacterial DNA recombination protein
181620233120242216190Aminotransferase class I and II
887610944864Phosphoribosyl transferase domain
11101010101010101091Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
2114Ribosome inactivating protein
1111111119Phosphoglycerate kinase
22222222218Ribosomal protein S4/S9 N-terminal domain
22332233222Ribosomal protein S12/S23
1111111119Bacterial regulatory helix-turn-helix proteins, AraC family
21111111110Chaperonin 10 Kd subunit
1111129131391014102C2 domain
201819818188819136PH domain
11911191213282311137bZIP transcription factor
181722243040312520227Aldehyde dehydrogenase family
2001711291883144292612741922,158Fungal Zn(2)-Cys(6) binuclear cluster domain
252422242526242221213Cytochrome b5-like Heme/Steroid binding domain
33344255433Oxidoreductase molybdopterin binding domain
181818191917182114162Oxidoreductase NAD-binding domain
202123242723252425212SNF2 family N-terminal domain
21222222217Ribosomal protein S7p/S5e
201920202120192120180Ubiquitin-conjugating enzyme
666691277766Isocitrate/isopropylmalate dehydrogenase
22222222218Ribosomal Proteins L2, RNA binding domain
1111111119Hsp90 protein
22222222218Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
11221111111Dihydrofolate reductase
4312414221Chitin recognition protein
55385475345Cysteine-rich secretory protein family
1111111119Ribosomal protein S3, C-terminal domain
43336765340Cupin
22222333221Annexin
11212119Eukaryotic-type carbonic anhydrase
12115Chalcone and stilbene synthases, N-terminal domain
112Bacterial regulatory proteins, luxR family
333343343292-oxoacid dehydrogenases acyltransferase (catalytic domain)
32874363743Catalase
22222121115Disintegrin
12210228936UDP-glucoronosyl and UDP-glucosyl transferase
13108101011129891Aminotransferase class-III
22222212217Ribosomal protein S19
1111111119DNA gyrase B
54699996461Thiamine pyrophosphate enzyme, central domain
44244743335Lyase
22222222218Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
111222211Sodium:neurotransmitter symporter family
11Ferritin-like domain
1111111119Adenylate and Guanylate cyclase catalytic domain
1111111119ATP synthase delta (OSCP) subunit
11232111113Orotidine 5'-phosphate decarboxylase / HUMPS family
1111111119Indole-3-glycerol phosphate synthase
11322211Aromatic amino acid lyase
1111111119Pyruvate kinase, barrel domain
111112121111131111103Kinesin motor domain
272527252726252726235DnaJ domain
141414141414141414126Proteasome subunit
54447565747Major intrinsic protein
1111111119ATP synthase
11332344223Glycosyl hydrolase family 1
11111111193'5'-cyclic nucleotide phosphodiesterase
11Protease inhibitor/seed storage/LTP family
1111111119Profilin
1121122111Ribosomal protein L22p/L17e
21222222217Ribosomal protein L14p/L23e
1013998988882Ubiquitin family
45555545341Cofilin/tropomyosin-type actin-binding protein
2223223322114-3-3 protein
34538532336Alkaline phosphatase
344416443446Zinc carboxypeptidase
171826254154322827268Aldo/keto reductase family
161513619157714112Myb-like DNA-binding domain
44444454437Forkhead domain
1121332316Glycosyl hydrolases family 32 N-terminal domain
11121122112Ribosomal protein L16p/L10e
22212212115Ribosomal protein S14p/S29e
33333332326FKBP-type peptidyl-prolyl cis-trans isomerase
1111111119Glutathione peroxidase
11222210
66889568763Flavodoxin
11Protamine P1
1111111119Calreticulin family
775910547256Common central domain of tyrosinase
9999108107374Aminotransferase class-V
1111111119Ribonucleotide reductase, small chain
403936523940494249386DEAD/DEAH box helicase
726970787772726975654Helicase conserved C-terminal domain
1111111119EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
22222222218Ribosomal protein L23
1111111119Pyridoxal-dependent decarboxylase, C-terminal sheet domain
21212221215Ribosomal protein L5
76799878667Pyridoxal-dependent decarboxylase conserved domain
33344343229Citrate synthase, C-terminal domain
55665565548GHMP kinases N terminal domain
77788687563Biotin carboxylase, N-terminal domain
1111111119Tryptophan synthase alpha chain
131215151212191412124Pyridoxal-phosphate dependent enzyme
161421211914201615156NUDIX domain
65656556448pfkB family carbohydrate kinase
11113923425Glycosyl hydrolases family 28
111126Luciferase-like monooxygenase
22122222217Ribosomal protein L3
22222212217Ribosomal protein L11, RNA binding domain
10111012141215116101Histidine phosphatase superfamily (branch 1)
1111111119Thymidylate synthase
221117Lipoxygenase
54464434438ATP synthase alpha/beta chain, C terminal domain
54445554541Calponin homology (CH) domain
66526533440Glutamine amidotransferases class-II
22222222218Ribosomal protein S15
112'Cold-shock' DNA-binding domain
11111112110Thaumatin family
22222222218Fructose-1-6-bisphosphatase, N-terminal domain
1111111119Ribonucleotide reductase, all-alpha domain
22222222218Ribosomal protein S2
22232222219SRF-type transcription factor (DNA-binding and dimerisation domain)
1296786912675GATA zinc finger
404236183839293233307Amino acid permease
77455597150Prolyl oligopeptidase family
22222222218Ribosomal protein L30p/L7e
97108107108473Histidine phosphatase superfamily (branch 2)
1111111119Respiratory-chain NADH dehydrogenase, 30 Kd subunit
44555845444Aconitase family (aconitate hydratase)
133119Glycosyl hydrolase family 10
22213313118Glycosyl hydrolases family 17
22222122217Ribosomal protein S5, N-terminal domain
1111111119Nucleoside diphosphate kinase
112Tetraspanin family
11121112111Ribosomal protein S10p/S20e
42363365335Arrestin (or S-antigen), N-terminal domain
11211111110Phosphoglucose isomerase
1111111119Carbohydrate phosphorylase
1111111119SecY translocase
1111111119Respiratory-chain NADH dehydrogenase, 49 Kd subunit
21222222217Ribosomal protein L6
54674364342Polyprenyl synthetase
45446565443Hexokinase
1171012111116159102Dynamin family
1111111119Transcription factor TFIID (or TATA-binding protein, TBP)
65666456448Rieske [2Fe-2S] domain
1113Phytochrome region
99791171010678Biotin-requiring enzyme
1111111119Phosphofructokinase
22112222216Ribosomal protein S17
11121212112Hydroxymethylglutaryl-coenzyme A reductase
33444344332FGGY family of carbohydrate kinases, N-terminal domain
112Sodium:dicarboxylate symporter family
151514181213151712131Enoyl-CoA hydratase/isomerase
22222222218Ribosomal protein S9/S16
22222222218Transcription factor TFIIB repeat
677881078667Cytidine and deoxycytidylate deaminase zinc-binding region
11221111111Molybdopterin oxidoreductase
116710862610185Chromo (CHRromatin Organisation MOdifier) domain
44444454437Phosphatidylinositol-specific phospholipase C, Y domain
55778586657Phosphatidylinositol-specific phospholipase C, X domain
66910716910578D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
22222222218Malic enzyme, N-terminal domain
1124PEP-utilising enzyme, mobile domain
213211211146-phosphogluconate dehydrogenase, C-terminal domain
11911186121210897Multicopper oxidase
1010999119101087WW domain
11111122111Ribosomal RNA adenine dimethylase
2211111110Yeast PIR protein repeat
112951131131191141121241231,025WD domain, G-beta repeat
54564555544Heavy-metal-associated domain
34334333430Adenylate kinase
22222222218Phosphoglucomutase/phosphomannomutase, C-terminal domain
21122122215Ribosomal protein S8
22222221116Ribosomal protein S11
44345343434LIM domain
32117Matrixin
13342144123Regulator of chromosome condensation (RCC1) repeat
22212222217Ribosomal protein S13/S18
11NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
22343334226chorismate binding enzyme
3333333332760s Acidic ribosomal protein
44545545440Prenyltransferase and squalene oxidase repeat
66756653549Protein kinase C terminal domain
1111111119Single-strand binding protein family
1111111119S-adenosylmethionine synthetase, N-terminal domain
78888798770Bromodomain
11101214151612128110Acyl-CoA dehydrogenase, C-terminal domain
141414131414121315123Ubiquitin carboxyl-terminal hydrolase
111111118Ribosomal protein L36
22122422320Ribonuclease T2 family
32333343327HSF-type DNA-binding
22232233221SRP54-type protein, GTPase domain
1111111119Urease alpha-subunit, N-terminal domain
121012119101311593Serine carboxypeptidase
88788888871Phosphatidylinositol 3- and 4-kinase
12112423218Transketolase, thiamine diphosphate binding domain
631313Glycosyl hydrolases family 11
54444555440Inositol monophosphatase family
44444445336Glutaredoxin
33322722226Isocitrate lyase family
22323222220Serine hydroxymethyltransferase
11331563225Iron-containing alcohol dehydrogenase
22222222218Ribosomal protein L10
32333222626KOW motif
112Ribosomal protein L34
11Ribosomal protein L33
32333323224RF-1 domain
33236233530Sodium:solute symporter family
11112111110Imidazoleglycerol-phosphate dehydratase
1111111119DNA polymerase family A
1111111119IMP dehydrogenase / GMP reductase domain
1111111119Glucose-6-phosphate dehydrogenase, NAD binding domain
911775766664Protein phosphatase 2C
11342332322Nucleotidyl transferase
22223532425Carbonic anhydrase
11111113212Phosphoribulokinase / Uridine kinase family
876910778668Fatty acid desaturase
64666666652MutS domain V
1111111119Delta-aminolevulinic acid dehydratase
33456667343Arginase family
66667666655MCM P-loop domain
21132232117Squalene/phytoene synthase
11Bacterial extracellular solute-binding proteins, family 5 Middle
1214111010101012897FHA domain
534651697583644637524AMP-binding enzyme
33447694343G-protein alpha subunit
77877879767HMG (high mobility group) box
11NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
9999161114121099His Kinase A (phospho-acceptor) domain
32222223321Armadillo/beta-catenin-like repeat
302328153231231424220Tetratricopeptide repeat
44335533535Ion transport protein
1111111119DNA gyrase/topoisomerase IV, subunit A
911107129661181BRCA1 C Terminus (BRCT) domain
44877866656Glycosyl transferases group 1
54324522330Glycosyl transferase family 2
1111111310SAM domain (Sterile alpha motif)
1111111119linker histone H1 and H5 family
1111111119Ribosomal protein L7/L12 C-terminal domain
426Pectate lyase
11232343120ribonuclease
1111111119Urease, gamma subunit
55555555545CoA-ligase
261831625751423219338Phosphopantetheine attachment site
43443334331Formyl transferase
8108129101412891Metallopeptidase family M24
14131211716211692Leucine Rich Repeat
3030285577891322272alpha/beta hydrolase fold
33333333327RNA polymerase Rpb2, domain 6
33444344433PB1 domain
22222222218Staphylococcal nuclease homologue
9101012101012121095Rab-GTPase-TBC domain
1111111119Tudor domain
1111111119WH1 domain
44645653542Zinc finger, ZZ type
1111111119HRDC domain
98989888976CBS domain
22222222218Ribosomal protein L13
22222222218Ribosomal protein L4/L1 family
1111111119Clp protease
54556454543S1 RNA binding domain
21121111111HIUase/Transthyretin family
33234233326AhpC/TSA family
44654445440tRNA synthetases class I (W and Y)
112111119UvrD/REP helicase N-terminal domain
65511831111464Rhodanese-like domain
22222222218Universal stress protein family
464639315161384940401Acetyltransferase (GNAT) family
1111111119SecE/Sec61-gamma subunits of protein translocation complex
1111111119C-terminal regulatory domain of Threonine dehydratase
22222222218AIR synthase related protein, N-terminal domain
899810897876tRNA synthetase class II core domain (G, H, P, S and T)
1111111119SpoU rRNA Methylase family
22212222217Tetrapyrrole (Corrin/Porphyrin) Methylases
1111111119Glycosyl transferase family, a/b domain
1111116PDZ domain
23122646329Class II Aldolase and Adducin N-terminal domain
11Adenoviral fibre protein (repeat/shaft region)
44444444436Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
55445455340Fes/CIP4, and EFC/F-BAR homology domain
55545432538IQ calmodulin-binding motif
22222222218Phosphoinositide 3-kinase family, accessory domain (PIK domain)
46525622537Phospholipase D Active site motif
11171176126Regulator of G protein signaling domain
44444444436GTPase-activator protein for Ras-like GTPase
43444454436RasGEF domain
43444454234RasGEF N-terminal motif
88889887872RhoGAP domain
56576766553RhoGEF domain
43493353337SPRY domain
33443343330RNA polymerase Rpb1, domain 2
23423222323Guanylate kinase
44444444436Gelsolin repeat
987410653759UBA/TS-N domain
141812111616121315127PHD-finger
11111112110GGL domain
66666666654HECT-domain (ubiquitin-transferase)
22112211214Helix-hairpin-helix motif
1111111119MSP (Major sperm protein) domain
44354434435Ribonuclease III domain
22242244224Region in Clathrin and VPS
32332334326RanBP1 domain
22212221216PPIC-type PPIASE domain
11223222217Zn-finger in Ran binding protein and others
151314817168915115Zinc finger C-x8-C-x5-C-x3-H type (and similar)
22133233120Poly(ADP-ribose) polymerase catalytic domain
11111117Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
554140146047101151329F-box domain
1111111119Elongation factor 1 gamma, conserved domain
2214333321Calpain family cysteine protease
332213216Copper fist DNA binding domain
998968107571CRAL/TRIO domain
1010915861511589BTB/POZ domain
64111421424Ricin-type beta-trefoil lectin domain
1111111119Inhibitor of Apoptosis domain
43444344333Voltage gated chloride channel
33335233227Caspase domain
3443151333553GDSL-like Lipase/Acylhydrolase
1111111119Poly-adenylate binding protein, unique domain
11114POLO box duplicated region
504627344037414425344ABC transporter transmembrane region
2122438Integrase core domain
55779576657FAD binding domain
221318272828201210178Condensation domain
1111111119S-adenosyl-L-homocysteine hydrolase, NAD binding domain
11111132112HAMP domain
21222222217ribosomal L5P family C-terminus
55676666552Insulinase (Peptidase family M16)
33334334329Dehydrogenase E1 component
1111111119Lumazine binding domain
66666666553Elongation factor G C-terminus
45586585450HMGL-like
44444434435DnaJ central domain
11113112112Starch binding domain
22232233221Ribosomal protein L1p/L10e family
12111216111017169114Cation transporting ATPase, C-terminus
131112151310171710118Cation transporter/ATPase, N-terminus
1111111119dUTPase
445