PFAM Domains • Gilbertella persicaria var. persicaria CBS 190.32-T v1.0
Annotations/GenomesBacci1Blatri1Gilper1Kircor1Mucci2Mycafr1Parpar1Rhich1Rhimi1_1Rhior3Thaele1Zyghet1TotalAnnotation Description
PFAMs
13,47810,52410,85915,7899,58410,06011,39115,2568,62612,21811,91312,692142,390
11137 transmembrane receptor (Secretin family)
522543353154427 transmembrane sweet-taste receptor of 3 GCPR
534039534437426538514350555ATPase family associated with various cellular activities (AAA)
674043655236466034444647580ABC transporter
12891596947111013113ATP synthase alpha/beta family, nucleotide-binding domain
13217EGF-like domain
252019231721193018242021257Elongation factor Tu GTP binding domain
753742763735447439524452607Helix-loop-helix DNA-binding domain
446473314734463Hsp20/alpha crystallin family
191415191114201810182717202Hsp70 protein
19910171410112213161114166KH domain
11Ribulose bisphosphate carboxylase large chain, catalytic domain
11114SH2 domain
893230584139359148553839595SH3 domain
161212141114141811151214163Actin
711491942149954565811402Ankyrin repeat
158101812910139111213140ADP-ribosylation factor family
351926372718213820352432332Eukaryotic aspartyl protease
777975612797891Cyclic nucleotide-binding domain
112Cytochrome b/b6/petB
21131213221221Cytochrome c
11111111112113Double-stranded RNA binding motif
54212432155334821244EF hand
11415124Fe-4S binding domain
211111119Fibronectin type III domain
41242215Globin
203491378191112710123Glutathione S-transferase, C-terminal domain
63253136344545Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
552118452722235129372327378Homeodomain
83395556345561lactate/malate dehydrogenase, NAD binding domain
22Lectin C-type domain
211517251714172816191616221Myosin head (motor domain)
853235604120346335484855556Cytochrome P450
3582212293452372132343862102962502533,232Protein kinase domain
231315251812172815211615218Pyridine nucleotide-disulphide oxidoreductase
825053846042608551657265769Ras family
301818291515182717211821247Response regulator receiver domain
11215RNase H
1378592125889191165961121041011,287RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
14950Retroviral aspartyl protease
14547011518Reverse transcriptase (RNA-dependent DNA polymerase)
553113336353252Copper/zinc superoxide dismutase (SODC)
11112112121216Iron/manganese superoxide dismutases, alpha-hairpin domain
312219241613162715241921247Subtilase family
663031564726344222463740477Sugar (and other) transporter
181615211514152416151415198Thioredoxin
11Thyroglobulin type-1 repeat
51224225342234Trypsin
1334587898118791Tubulin/FtsZ family, GTPase domain
11von Willebrand factor type A domain
11WAP-type (Whey Acidic Protein) 'four-disulfide core'
1742728561402929147871383844937Zinc finger, C2H2 type
961071164747760411113401Zinc finger, C3HC4 type (RING finger)
18278114591737231321310350Zinc knuckle
75776568587576Protein-tyrosine phosphatase
493533584528344927313040459short chain dehydrogenase
462527522921193923282337369Zinc-binding dehydrogenase
96611106811577894Thiolase, N-terminal domain
32243433232233Beta-ketoacyl synthase, N-terminal domain
51124184511332Fe-2S iron-sulfur cluster binding domain
32232124222530Enolase, C-terminal TIM barrel domain
22Cytochrome C and Quinol oxidase polypeptide I
112Cytochrome C oxidase subunit II, periplasmic domain
131010169891799119130Glutamine amidotransferase class-I
151212141112111611181315160TCP-1/cpn60 chaperonin family
956654510566572Glutamine synthetase, catalytic domain
21181112111121Triosephosphate isomerase
493334523034404826344339462E1-E2 ATPase
21141117141414131420148174Core histone H2A/H2B/H3/H4
2112111413118Alpha amylase, catalytic domain
171091549112411131110144Phorbol esters/diacylglycerol binding domain (C1 domain)
86798771789811105Bacterial transferase hexapeptide (six repeats)
66674678476774tRNA synthetases class I (I, L, M and V)
181514291814193320171718232Cyclin, N-terminal domain
22223122132224Carboxylesterase family
55555558466665DNA polymerase family B
83345348453555ATP synthase subunit C
111111111211Legume lectin domain
43354246333444Peroxidase
11134Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
1121111211113Beta-lactamase
12222212111118C-5 cytosine-specific DNA methylase
1113NADH dehydrogenase
493033493732365033373636458Calcineurin-like phosphoesterase
55563346445757Cellulase (glycosyl hydrolase family 5)
854766610676778tRNA synthetases class II (D, K and N)
805657846353619052636472795Mitochondrial carrier protein
11recA bacterial DNA recombination protein
271718312018203418222022267Aminotransferase class I and II
14468136716101576112Phosphoribosyl transferase domain
151414161514152716171515193Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
11122112121217Phosphoglycerate kinase
33353332353339Ribosomal protein S4/S9 N-terminal domain
44374346464352Ribosomal protein S12/S23
12222121111218Chaperonin 10 Kd subunit
361719292321194120261820289C2 domain
8532385144273510253603530592PH domain
483131572827314926383639441bZIP transcription factor
201415221513152212151618197Aldehyde dehydrogenase family
924345894640577752304654671Fungal Zn(2)-Cys(6) binuclear cluster domain
603133544131346937413140502Cytochrome b5-like Heme/Steroid binding domain
2221212111116Oxidoreductase molybdopterin binding domain
191413211612142313141415188Oxidoreductase NAD-binding domain
262124262022243622262227296SNF2 family N-terminal domain
44464346354451Ribosomal protein S7p/S5e
261822262222224322262325297Ubiquitin-conjugating enzyme
117798671279910102Isocitrate/isopropylmalate dehydrogenase
64465444455556Ribosomal Proteins L2, RNA binding domain
54474348454557Hsp90 protein
42333224243234Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
22222224212124Dihydrofolate reductase
4444613422101155Cysteine-rich secretory protein family
54455453334550Ribosomal protein S3, C-terminal domain
655563564666632-oxoacid dehydrogenases acyltransferase (catalytic domain)
75584346345458Catalase
63353332233238Disintegrin
20108231059117121211138UDP-glucoronosyl and UDP-glucosyl transferase
86676569565675Aminotransferase class-III
75454344354452Ribosomal protein S19
11111112111113DNA gyrase B
7431065543510668Thiamine pyrophosphate enzyme, central domain
44444446344550Lyase
52253237333341Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
12232223232226Ferritin-like domain
42242224232231Adenylate and Guanylate cyclase catalytic domain
21121112121116ATP synthase delta (OSCP) subunit
11111111111112Orotidine 5'-phosphate decarboxylase / HUMPS family
21121111111215Indole-3-glycerol phosphate synthase
43263336354244Pyruvate kinase, barrel domain
362627302824294628332630363Kinesin motor domain
453237523933426737384038500DnaJ domain
171414241414142614261416207Proteasome subunit
12342221123629Major intrinsic protein
22222122122222ATP synthase
12661587796878993'5'-cyclic nucleotide phosphodiesterase
11111113221217Profilin
54474348454658Ribosomal protein L22p/L17e
43353334363242Ribosomal protein L14p/L23e
312026282217173521282135301Ubiquitin family
7771066712687689Cofilin/tropomyosin-type actin-binding protein
6346333847455614-3-3 protein
53474335344651Alkaline phosphatase
421522342612183418191527282Aldo/keto reductase family
391821322324196133332126350Myb-like DNA-binding domain
141092010910136121010133Forkhead domain
11Glycosyl hydrolases family 32 N-terminal domain
14421442124433Ribosomal protein L16p/L10e
53354432343443Ribosomal protein S14p/S29e
955765410566775FKBP-type peptidyl-prolyl cis-trans isomerase
22221223232225Glutathione peroxidase
5564424
21109161589201114912154Flavodoxin
11121112121115Calreticulin family
966876895571187Aminotransferase class-V
31253232122329Ribonucleotide reductase, small chain
525251634858528547575560680DEAD/DEAH box helicase
99777696818084128778482861,050Helicase conserved C-terminal domain
21111112111114EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
53454444354449Ribosomal protein L23
3111111121316Pyridoxal-dependent decarboxylase, C-terminal sheet domain
54473335474554Ribosomal protein L5
64474345344452Pyridoxal-dependent decarboxylase conserved domain
22251222113326Citrate synthase, C-terminal domain
766666612666679GHMP kinases N terminal domain
12781411991689109122Biotin carboxylase, N-terminal domain
11111112121114Tryptophan synthase alpha chain
129910109915910913124Pyridoxal-phosphate dependent enzyme
156'Paired box' domain
261718252320203920232223276NUDIX domain
1066776610666783pfkB family carbohydrate kinase
562277185658Glycosyl hydrolases family 28
54464345354552Ribosomal protein L3
63474447474559Ribosomal protein L11, RNA binding domain
13891511101116107910129Histidine phosphatase superfamily (branch 1)
11111112111113Thymidylate synthase
11891596937111012110ATP synthase alpha/beta chain, C terminal domain
137101912710211291318151Calponin homology (CH) domain
213Bacterial dnaA protein
1035612459685780Glutamine amidotransferases class-II
33343226353239Ribosomal protein S15
2111212212116'Cold-shock' DNA-binding domain
73674358465563Thaumatin family
1111112121113Fructose-1-6-bisphosphatase, N-terminal domain
52374446334449Ribonucleotide reductase, all-alpha domain
75464344365556Ribosomal protein S2
14871410109149999122SRF-type transcription factor (DNA-binding and dimerisation domain)
653637733632386839394344550GATA zinc finger
3576152181034182498195Amino acid permease
97710667126761093Prolyl oligopeptidase family
64665558476466Ribosomal protein L30p/L7e
64365437453454Histidine phosphatase superfamily (branch 2)
21111112111114Respiratory-chain NADH dehydrogenase, 30 Kd subunit
64566469565870Aconitase family (aconitate hydratase)
4232332323229Glycosyl hydrolases family 17
54454433363448Ribosomal protein S5, N-terminal domain
65686669556674Nucleoside diphosphate kinase
74496562314657Tetraspanin family
33343336363343Ribosomal protein S10p/S20e
462927572225333220173240380Arrestin (or S-antigen), N-terminal domain
11111112111113Phosphoglucose isomerase
32232123222226Carbohydrate phosphorylase
42242224232231SecY translocase
11121112121115Respiratory-chain NADH dehydrogenase, 49 Kd subunit
43343336343443Ribosomal protein L6
65565559555768Polyprenyl synthetase
171091811910168111112142Hexokinase
999117710137898107Dynamin family
11111112121114Biopterin-dependent aromatic amino acid hydroxylase
31132221122121Transcription factor TFIID (or TATA-binding protein, TBP)
54465345444452Rieske [2Fe-2S] domain
213Proton-conducting membrane transporter
15911141211131910121414154Biotin-requiring enzyme
42242224222129Phosphofructokinase
32232221232327Ribosomal protein S17
22243233223432Hydroxymethylglutaryl-coenzyme A reductase
966765612675681FGGY family of carbohydrate kinases, N-terminal domain
31132122112322Sodium:dicarboxylate symporter family
1789141410112312131513159Enoyl-CoA hydratase/isomerase
53444348464453Ribosomal protein S9/S16
11114PTS HPr component phosphorylation site
33333234233436Transcription factor TFIIB repeat
10457948106510987Cytidine and deoxycytidylate deaminase zinc-binding region
211211112113Molybdopterin oxidoreductase
23121420991837182391913431Chromo (CHRromatin Organisation MOdifier) domain
112Phosphatidylinositol-specific phospholipase C, X domain
63475458565563D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
735105358555566Malic enzyme, N-terminal domain
311431242322286-phosphogluconate dehydrogenase, C-terminal domain
76995557357876Multicopper oxidase
26131420811122513171914192WW domain
33333436333239Ribosomal RNA adenine dimethylase
2041551621921581551642881571731711802,159WD domain, G-beta repeat
55555445336555Heavy-metal-associated domain
843866610555672Adenylate kinase
23342324233334Phosphoglucomutase/phosphomannomutase, C-terminal domain
52363336353345Ribosomal protein S8
43354426333343Ribosomal protein S11
191613241315162415111615197LIM domain
35681658467665Regulator of chromosome condensation (RCC1) repeat
43474344454450Ribosomal protein S13/S18
2111112111113Tau and MAP protein, tubulin-binding repeat
11NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
42222223222227chorismate binding enzyme
15889868137118710860s Acidic ribosomal protein
43454348443450Prenyltransferase and squalene oxidase repeat
17910129810171014109135Protein kinase C terminal domain
11Spectrin repeat
11121112121115Single-strand binding protein family
11Type II/IV secretion system protein
2112111212115S-adenosylmethionine synthetase, N-terminal domain
231718252016182718181917236Bromodomain
211515261516162517201622224Acyl-CoA dehydrogenase, C-terminal domain
271919232619204322252821292Ubiquitin carboxyl-terminal hydrolase
111111118Ribosomal protein L36
22231114321426Ribonuclease T2 family
291819312019192514181919250HSF-type DNA-binding
22222234223228SRP54-type protein, GTPase domain
31122122112220Urease alpha-subunit, N-terminal domain
74575467476668Serine carboxypeptidase
151312131312122112121311159Phosphatidylinositol 3- and 4-kinase
62232123223230Transketolase, thiamine diphosphate binding domain
1111112111112WHEP-TRS domain
22232224222227Inositol monophosphatase family
868111068136661098Glutaredoxin
42242224222331Isocitrate lyase family
22232224222227Serine hydroxymethyltransferase
2111112121114Iron-containing alcohol dehydrogenase
34464345354348Ribosomal protein L10
14891710119762389131KOW motif
11111112111113Ribosomal protein L34
11111112111113Ribosomal protein L33
33333335333338RF-1 domain
11212111111Sodium:solute symporter family
21111112111114Imidazoleglycerol-phosphate dehydratase
11111111111112DNA polymerase family A
31122122122221IMP dehydrogenase / GMP reductase domain
52243334242337Glucose-6-phosphate dehydrogenase, NAD binding domain
1791017109101811171010148Protein phosphatase 2C
7669676116671087Nucleotidyl transferase
31132211112220Carbonic anhydrase
33132424232231Phosphoribulokinase / Uridine kinase family
13791287614710119113Fatty acid desaturase
666676610656676MutS domain V
11112112111114Delta-aminolevulinic acid dehydratase
33232224232634Arginase family
66566669676675MCM P-loop domain
35473446345654Squalene/phytoene synthase
291617341715203215201719251FHA domain
11NADH-ubiquinone/plastoquinone oxidoreductase chain 6
572730503727345730393936463AMP-binding enzyme
179101412712148111112137G-protein alpha subunit
312121342126233719292223307HMG (high mobility group) box
11Cytochrome c oxidase subunit III
1578167891381289120His Kinase A (phospho-acceptor) domain
199914108918891011134Armadillo/beta-catenin-like repeat
572023253617247037432521398Tetratricopeptide repeat
1856138669449593Ion transport protein
11111112111113DNA gyrase/topoisomerase IV, subunit A
136631066151285393BRCA1 C Terminus (BRCT) domain
9678977127971098Glycosyl transferases group 1
82224227352241Glycosyl transferase family 2
9668244107124577SAM domain (Sterile alpha motif)
22211221131119linker histone H1 and H5 family
1112112121114Ribosomal protein L7/L12 C-terminal domain
31122122112220Urease, gamma subunit
73374345353350CoA-ligase
9451184684107884Phosphopantetheine attachment site
22232224222227Formyl transferase
161314151513152615171515189Metallopeptidase family M24
451011163316134727341211275Leucine Rich Repeat
33558258828161676165alpha/beta hydrolase fold
43353335353343RNA polymerase Rpb2, domain 6
1791016889178989128PB1 domain
22222224222226Staphylococcal nuclease homologue
452628402726314122262935376Rab-GTPase-TBC domain
11111112111113Tudor domain
32212133112223WH1 domain
96665667566674Zinc finger, ZZ type
22222112112220HRDC domain
241616241814