PFAM Domains • Mycotypha africana NRRL 2978 v1.0
Annotations/GenomesBacci1Mucci2Mycafr1Parpar1Rhimi1_1Thaele1Umbra1TotalAnnotation Description
PFAMs
13,4789,58410,06011,3918,62611,9138,51573,567
117 transmembrane receptor (Secretin family)
5433353267 transmembrane sweet-taste receptor of 3 GCPR
53443742384340297ATPase family associated with various cellular activities (AAA)
67523646344635316ABC transporter
12969710760ATP synthase alpha/beta family, nucleotide-binding domain
123EGF-like domain
25172119182018138Elongation factor Tu GTP binding domain
75373544394431305Helix-loop-helix DNA-binding domain
473374230Hsp20/alpha crystallin family
1911142010279110Hsp70 protein
1914101113111391KH domain
1113SH2 domain
89413935483845335SH3 domain
1611141411121088Actin
714214945864253Ankyrin repeat
1512910912976ADP-ribosylation factor family
35271821202423168Eukaryotic aspartyl protease
775677645Cyclic nucleotide-binding domain
11Cytochrome b(C-terminal)/b6/petD
134Cytochrome b/b6/petB
212121110Cytochrome c
11111229Double-stranded RNA binding motif
54432133234169EF hand
111144Fe-4S binding domain
211116Fibronectin type III domain
42219Globin
2013781171581Glutathione S-transferase, C-terminal domain
631334121Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
55272223292318197Homeodomain
855535334lactate/malate dehydrogenase, NAD binding domain
22Lectin C-type domain
2117141716168109Myosin head (motor domain)
85412034354849312Cytochrome P450
3582372132342102501651,667Protein kinase domain
23181217151616117Pyridine nucleotide-disulphide oxidoreductase
82604260517239406Ras family
30151518171820133Response regulator receiver domain
1113RNase H
1378891919610495702RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
1135Reverse transcriptase (RNA-dependent DNA polymerase)
533333222Copper/zinc superoxide dismutase (SODC)
12111118Iron/manganese superoxide dismutases, alpha-hairpin domain
31161316151911121Subtilase family
66472634223747279Sugar (and other) transporter
18151415161413105Thioredoxin
11Thyroglobulin type-1 repeat
11Trefoil (P-type) domain
542232624Trypsin
1387888658Tubulin/FtsZ family, GTPase domain
1741402929873869566Zinc finger, C2H2 type
966474601162304Zinc finger, C3HC4 type (RING finger)
1845917231319144Zinc knuckle
765657339Protein-tyrosine phosphatase
49452834273071284short chain dehydrogenase
46292119232334195Zinc-binding dehydrogenase
9106857651Thiolase, N-terminal domain
334322219Beta-ketoacyl synthase, N-terminal domain
541412172Fe-2S iron-sulfur cluster binding domain
321222113Enolase, C-terminal TIM barrel domain
11Cytochrome C and Quinol oxidase polypeptide I
112Cytochrome C oxidase subunit II, periplasmic domain
13989911867Glutamine amidotransferase class-I
1511121111131184TCP-1/cpn60 chaperonin family
11ATP synthase A chain
954556438Glutamine synthetase, catalytic domain
21111118Triosephosphate isomerase
49303440264325247E1-E2 ATPase
2114141414149100Core histone H2A/H2B/H3/H4
11Copper binding proteins, plastocyanin/azurin family
211111613Alpha amylase, catalytic domain
17491111111073Phorbol esters/diacylglycerol binding domain (C1 domain)
8877881056Bacterial transferase hexapeptide (six repeats)
646746437tRNA synthetases class I (I, L, M and V)
18181419201716122Cyclin, N-terminal domain
231212617Carboxylesterase family
555546535DNA polymerase family B
853443431ATP synthase subunit C
1111116Legume lectin domain
442433222Peroxidase
114Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
111111410Beta-lactamase
122111210C-5 cytosine-specific DNA methylase
1113NADH dehydrogenase
49373236333629252Calcineurin-like phosphoesterase
533445832Cellulase (glycosyl hydrolase family 5)
866666644tRNA synthetases class II (D, K and N)
80635361526445418Mitochondrial carrier protein
27201820182015138Aminotransferase class I and II
141367107966Phosphoribosyl transferase domain
15151415161511101Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
12111118Phosphoglycerate kinase
333333321Ribosomal protein S4/S9 N-terminal domain
443444326Ribosomal protein S12/S23
22Bacterial regulatory helix-turn-helix proteins, AraC family
12121119Chaperonin 10 Kd subunit
36232119201819156C2 domain
85442735533545324PH domain
48282731263613209bZIP transcription factor
20151315121613104Aldehyde dehydrogenase family
92464057524660393Fungal Zn(2)-Cys(6) binuclear cluster domain
60413134373130264Cytochrome b5-like Heme/Steroid binding domain
221211211Oxidoreductase molybdopterin binding domain
19161214131414102Oxidoreductase NAD-binding domain
26202224222221157SNF2 family N-terminal domain
443434325Ribosomal protein S7p/S5e
26222222222320157Ubiquitin-conjugating enzyme
1186779654Isocitrate/isopropylmalate dehydrogenase
654445432Ribosomal Proteins L2, RNA binding domain
543444327Hsp90 protein
432223218Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
222222214Dihydrofolate reductase
4613210329Cysteine-rich secretory protein family
554534228Ribosomal protein S3, C-terminal domain
6635464342-oxoacid dehydrogenases acyltransferase (catalytic domain)
743435329Catalase
633323323Disintegrin
201059712568UDP-glucoronosyl and UDP-glucosyl transferase
865655540Aminotransferase class-III
743434328Ribosomal protein S19
11111117DNA gyrase B
7655310339Thiamine pyrophosphate enzyme, central domain
444434427Lyase
532333322Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
122222415Ferritin-like domain
422222115Adenylate and Guanylate cyclase catalytic domain
21111118ATP synthase delta (OSCP) subunit
11111117Orotidine 5'-phosphate decarboxylase / HUMPS family
21111118Indole-3-glycerol phosphate synthase
433334222Pyruvate kinase, barrel domain
36282429282618189Kinesin motor domain
45393342374030266DnaJ domain
17141414141413100Proteasome subunit
122213415Major intrinsic protein
22121210ATP synthase
22Glycosyl hydrolase family 1
12877673503'5'-cyclic nucleotide phosphodiesterase
11112118Profilin
543444226Ribosomal protein L22p/L17e
433333322Ribosomal protein L14p/L23e
31221717212120149Ubiquitin family
766767645Cofilin/tropomyosin-type actin-binding protein
63334432614-3-3 protein
543334224Alkaline phosphatase
22Zinc carboxypeptidase
42261218181528159Aldo/keto reductase family
39232419332125184Myb-like DNA-binding domain
1410910610766Forkhead domain
123Glycosyl hydrolases family 32 N-terminal domain
114414116Ribosomal protein L16p/L10e
544333325Ribosomal protein S14p/S29e
965456742FKBP-type peptidyl-prolyl cis-trans isomerase
212222112Glutathione peroxidase
554317
2115891191487Flavodoxin
11111117Calreticulin family
976857749Aminotransferase class-V
332312115Ribonucleotide reductase, small chain
52485852475545357DEAD/DEAH box helicase
99818084778275578Helicase conserved C-terminal domain
21111118EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
544434327Ribosomal protein L23
31111119Pyridoxal-dependent decarboxylase, C-terminal sheet domain
533344325Ribosomal protein L5
643434630Pyridoxal-dependent decarboxylase conserved domain
212213112Citrate synthase, C-terminal domain
766666643GHMP kinases N terminal domain
121199810867Biotin carboxylase, N-terminal domain
11111117Tryptophan synthase alpha chain
121099991169Pyridoxal-phosphate dependent enzyme
11'Paired box' domain
26232020202215146NUDIX domain
1076666647pfkB family carbohydrate kinase
5275322Glycosyl hydrolases family 28
543434225Ribosomal protein L3
644444430Ribosomal protein L11, RNA binding domain
131110111091074Histidine phosphatase superfamily (branch 1)
11111117Thymidylate synthase
11969710759ATP synthase alpha/beta chain, C terminal domain
13127101213875Calponin homology (CH) domain
11Bacterial dnaA protein
10124565547Glutamine amidotransferases class-II
332233319Ribosomal protein S15
221212212'Cold-shock' DNA-binding domain
743545432Thaumatin family
11111117Fructose-1-6-bisphosphatase, N-terminal domain
544434226Ribonucleotide reductase, all-alpha domain
743435329Ribosomal protein S2
141010999667SRF-type transcription factor (DNA-binding and dimerisation domain)
65363238394322275GATA zinc finger
352181018925126Amino acid permease
966766848Prolyl oligopeptidase family
655546132Ribosomal protein L30p/L7e
654343530Histidine phosphatase superfamily (branch 2)
21111118Respiratory-chain NADH dehydrogenase, 30 Kd subunit
664655638Aconitase family (aconitate hydratase)
11Glycosyl hydrolase family 10
43333521Glycosyl hydrolases family 17
544333325Ribosomal protein S5, N-terminal domain
666656338Nucleoside diphosphate kinase
765634435Tetraspanin family
333333220Ribosomal protein S10p/S20e
46222533203220198Arrestin (or S-antigen), N-terminal domain
11111117Phosphoglucose isomerase
321222113Carbohydrate phosphorylase
422222115SecY translocase
11111117Respiratory-chain NADH dehydrogenase, 49 Kd subunit
433333322Ribosomal protein L6
655555334Polyprenyl synthetase
1711910811874Hexokinase
9771079655Dynamin family
11111117Biopterin-dependent aromatic amino acid hydroxylase
322212113Transcription factor TFIID (or TATA-binding protein, TBP)
553444429Rieske [2Fe-2S] domain
246Proton-conducting membrane transporter
1512111310141085Biotin-requiring enzyme
422222216Phosphofructokinase
322222215Ribosomal protein S17
232323116Hydroxymethylglutaryl-coenzyme A reductase
965665542FGGY family of carbohydrate kinases, N-terminal domain
32121211Sodium:dicarboxylate symporter family
1714101112151291Enoyl-CoA hydratase/isomerase
543444327Ribosomal protein S9/S16
112PTS HPr component phosphorylation site
332323319Transcription factor TFIIB repeat
10948610754Cytidine and deoxycytidylate deaminase zinc-binding region
21111118Molybdopterin oxidoreductase
23991818196102Chromo (CHRromatin Organisation MOdifier) domain
11Phosphatidylinositol-specific phospholipase C, X domain
654555535D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
753555333Malic enzyme, N-terminal domain
11PEP-utilising enzyme, mobile domain
3312221146-phosphogluconate dehydrogenase, C-terminal domain
755537537Multicopper oxidase
2681112131912101WW domain
334333322Ribosomal RNA adenine dimethylase
2041581551641571711451,154WD domain, G-beta repeat
11Calponin family repeat
554436431Heavy-metal-associated domain
866655440Adenylate kinase
223223216Phosphoglucomutase/phosphomannomutase, C-terminal domain
533333222Ribosomal protein S8
444233323Ribosomal protein S11
19131516151612106LIM domain
316547430Regulator of chromosome condensation (RCC1) repeat
443444326Ribosomal protein S13/S18
21111118Tau and MAP protein, tubulin-binding repeat
11NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
422222216chorismate binding enzyme
158687855760s Acidic ribosomal protein
443443426Prenyltransferase and squalene oxidase repeat
17981010101074Protein kinase C terminal domain
11Spectrin repeat
11111117Single-strand binding protein family
21111118S-adenosylmethionine synthetase, N-terminal domain
23201618181912126Bromodomain
21151616171612113Acyl-CoA dehydrogenase, C-terminal domain
27261920222819161Ubiquitin carboxyl-terminal hydrolase
111115Ribosomal protein L36
211131312Ribonuclease T2 family
29201919141912132HSF-type DNA-binding
222323216SRP54-type protein, GTPase domain
321212112Urease alpha-subunit, N-terminal domain
754646335Serine carboxypeptidase
151312121213986Phosphatidylinositol 3- and 4-kinase
621223218Transketolase, thiamine diphosphate binding domain
1111127WHEP-TRS domain
222222214Inositol monophosphatase family
8106866650Glutaredoxin
422222216Isocitrate lyase family
222222214Serine hydroxymethyltransferase
21111118Iron-containing alcohol dehydrogenase
343434122Ribosomal protein L10
141011968765KOW motif
11111117Ribosomal protein L34
1111116Ribosomal protein L33
333333220RF-1 domain
111115Sodium:solute symporter family
21111118Imidazoleglycerol-phosphate dehydratase
11111117DNA polymerase family A
321212112IMP dehydrogenase / GMP reductase domain
533322220Glucose-6-phosphate dehydrogenase, NAD binding domain
17109101110673Protein phosphatase 2C
767667544Nucleotidyl transferase
322112112Carbonic anhydrase
324222217Phosphoribulokinase / Uridine kinase family
13876711658Fatty acid desaturase
676666643MutS domain V
12111118Delta-aminolevulinic acid dehydratase
322222316Arginase family
666666642MCM P-loop domain
334435224Squalene/phytoene synthase
29171520151714127FHA domain
112NADH-ubiquinone/plastoquinone oxidoreductase chain 6
57372734303925249AMP-binding enzyme
1712712811976G-protein alpha subunit
31212623192216158HMG (high mobility group) box
11NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
112Cytochrome c oxidase subunit III
15789881267His Kinase A (phospho-acceptor) domain
191089810771Armadillo/beta-catenin-like repeat
57361724372536232Tetratricopeptide repeat
1886649859Ion transport protein
11111117DNA gyrase/topoisomerase IV, subunit A
1310661251264BRCA1 C Terminus (BRCT) domain
997777753Glycosyl transferases group 1
842232627Glycosyl transferase family 2
924474333SAM domain (Sterile alpha motif)
212211312linker histone H1 and H5 family
1111116Ribosomal protein L7/L12 C-terminal domain
321212112Urease, gamma subunit
743433327CoA-ligase
984647644Phosphopantetheine attachment site
222222214Formyl transferase
11Cellulose binding domain
16151315151512101Metallopeptidase family M24
45331613271226172Leucine Rich Repeat
33258816732129alpha/beta hydrolase fold
433333322RNA polymerase Rpb2, domain 6
1788988866PB1 domain
222222214Staphylococcal nuclease homologue
45272631222920200Rab-GTPase-TBC domain
11111117Tudor domain
321312214WH1 domain
956656744Zinc finger, ZZ type
221112211HRDC domain
24181417151714119CBS domain
633345226Ribosomal protein L13
543433224Ribosomal protein L4/L1 family
11111117Clp protease
434444528S1 RNA binding domain
11111117HIUase/Transthyretin family
856656743AhpC/TSA family
444444428tRNA synthetases class I (W and Y)
211127UvrD/REP helicase N-terminal domain
9810127131069Rhodanese-like domain
17129149131084Universal stress protein family
49432026282639231Acetyltransferase (GNAT) family
11111117SecE/Sec61-gamma subunits of protein translocation complex
11111117C-terminal regulatory domain of Threonine dehydratase
222222214AIR synthase related protein, N-terminal domain
1211991291173tRNA synthetase class II core domain (G, H, P, S and T)
333333321SpoU rRNA Methylase family
333323320Tetrapyrrole (Corrin/Porphyrin) Methylases
11111117Glycosyl transferase family, a/b domain
1113PDZ domain
222222214Class II Aldolase and Adducin N-terminal domain
22Adenoviral fibre protein (repeat/shaft region)
12227Diacylglycerol kinase accessory domain
126910811460Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
1212111210121180Fes/CIP4, and EFC/F-BAR homology domain
1296697655IQ calmodulin-binding motif
333333220Phosphoinositide 3-kinase family, accessory domain (PIK domain)
1586676553Phospholipase D Active site motif
1281315718477Regulator of G protein signaling domain
13108101010667GTPase-activator protein for Ras-like GTPase
32171519192011133RasGEF domain
23910121113684RasGEF N-terminal motif
49333034313723237RhoGAP domain
51312631273422222RhoGEF domain
12128111113875SPRY domain
433333322RNA polymerase Rpb1, domain 2
11111117Guanylate kinase
875758646Gelsolin repeat
2213913181119105UBA/TS-N domain
38232124312528190PHD-finger
233344423GGL domain
1310101010101073HECT-domain (ubiquitin-transferase)
12112119Helix-hairpin-helix motif
11BRCA2 repeat
212323518MSP (Major sperm protein) domain
331232317Ribonuclease III domain
326626227Region in Clathrin and VPS
422222216RanBP1 domain
321221213PPIC-type PPIASE domain
425544428Zn-finger in Ran binding protein and others
27171714211321130Zinc finger C-x8-C-x5-C-x3-H type (and similar)
2114B-box zinc finger
1111127Poly(ADP-ribose) polymerase catalytic domain
1221219Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
1851051212761368471F-box domain
421212113Elongation factor 1 gamma, conserved domain
11111117Calpain family cysteine protease
965465439Copper fist DNA binding domain
16101211711774CRAL/TRIO domain
217101212151390BTB/POZ domain
167781371068Ricin-type beta-trefoil lectin domain
111137Inhibitor of Apoptosis domain
322222215Voltage gated chloride channel
654444128Caspase domain
141515129121188GDSL-like Lipase/Acylhydrolase
1023656436Poly-adenylate binding protein, unique domain
1111116POLO box duplicated region
11NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
31251320111916135ABC transporter transmembrane region
123Integrase core domain
987778854FAD binding domain
2111218Condensation domain
21111118S-adenosyl-L-homocysteine hydrolase, NAD binding domain
832222221HAMP domain
543444327ribosomal L5P family C-terminus
1378789759Insulinase (Peptidase family M16)
764546537Dehydrogenase E1 component
11111117Lumazine binding domain
977687751Elongation factor G C-terminus
666646539HMGL-like
774557540DnaJ central domain
1113Sulfotransferase domain
11Starch binding domain
435535126Ribosomal protein L1p/L10e family
22131216121712104Cation transporting ATPase, C-terminus
32181821162517147Cation transporter/ATPase, N-terminus
111115dUTPase
664655638Aconitase C-terminal domain
976656544Amino acid kinase family
21111118N-(5'phosphoribosyl)anthranilate (PRA) isomerase
433322118Acyl transferase domain
321212112Urease beta subunit
332321216Dihydrodipicolinate synthetase family
70492129363440279haloacid dehalogenase-like hydrolase
11Glycosyl hydrolases family 2
221481311131495Glycosyl hydrolases family 18
11111117Proliferating cell nuclear antigen, N-terminal domain
11114Translation initiation factor IF-3, C-terminal domain
11111117Adenylosuccinate synthetase
11111117Asparaginase, N-terminal
433244323Peptidase S24-like
444444226Inorganic pyrophosphatase
1164777951Glycosyl hydrolases family 16
533433324Glycosyl hydrolases family 15
2712571010677NADH:flavin oxidoreductase / NADH oxidase family
2222222143-hydroxyacyl-CoA dehydrogenase, C-terminal domain
642346833Glycosyl hydrolase family 20, catalytic domain
444444327HhH-GPD superfamily base excision DNA repair protein
11111117AIR carboxylase
953334431GMC oxidoreductase
573733331Asparagine synthase
2132614Fungal cellulose binding domain
2214101514141099Septin
222122213EF-1 guanine nucleotide exchange domain
321212112Homoserine dehydrogenase
123410Flavin-binding monooxygenase-like
333333321tRNA synthetases class I (E and Q), catalytic domain
433333120tRNA synthetases class I (R)
745648640XPG N-terminal domain
14126913101276Metallo-beta-lactamase superfamily
11121129F5/8 type C domain
1166666445Choline/Carnitine o-acyltransferase
1111116Putative esterase
744534431Glycosyl hydrolase family 9
11111117Ferrochelatase
442344324Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
31111119Arginosuccinate synthase
2111117Electron transfer flavoprotein FAD-binding domain
1398889762RNB domain
19121013913682CNH domain
654555434Diacylglycerol kinase catalytic domain
151211159151188Dual specificity phosphatase, catalytic domain
22222212MyTH4 domain
14510119111171P21-Rho-binding domain
40232831263021199PX domain
1256767649Ras association (RalGDS/AF-6) domain
877778549UBX domain
1475878756VHS domain
11114Phosphoinositide 3-kinase C2
645434329DAHP synthetase I family
764653839Carbon-nitrogen hydrolase
11N-acetyltransferase
11111117Prephenate dehydratase
14116778659Syntaxin
1514101211121185Pumilio-family RNA binding repeat
767688648Histone-like transcription factor (CBF/NF-Y) and archaeal histone
222222214Pterin binding enzyme
422212114ER lumen protein retaining receptor
222222214tRNA N6-adenosine threonylcarbamoyltransferase
11111117Histidinol dehydrogenase
433333322impB/mucB/samB family
1113Ribonuclease P
433212
533334223Ribosomal L15
536738234Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
11111117Ribosomal prokaryotic L21 protein
1111116Ribosomal L28 family
532323220Ribosomal L29 protein
232333218Ribosomal L39 protein
522222217Ribosomal S17
11111117Ribulose-phosphate 3 epimerase family
11111117Translationally controlled tumour protein
333343120RNA pseudouridylate synthase
886766546Histone deacetylase domain
22221110Glycosyltransferase family 10 (fucosyltransferase) C-term
864545436POT family
613422321PWWP domain
26242322222616159SET domain
14103863549Isochorismatase family
1064667443Permease family
332223217Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
755548539XPG I-region
11Acetokinase family
111115DNA photolyase