PFAM Domains • Pilaira anomala RSA1997 v1.0
Annotations/GenomesBacci1Blatri1Kircor1Mucci2Mycafr1Parpar1Phybl2Pilano1Radspe1Rhich1Rhimi1_1Rhior3Thaele1Zyghet1TotalAnnotation Description
PFAMs
13,47810,52415,7899,58410,06011,3919,21611,63710,79215,2568,62612,21811,91312,692163,176
117 transmembrane receptor (rhodopsin family)
11137 transmembrane receptor (Secretin family)
52543332453154497 transmembrane sweet-taste receptor of 3 GCPR
5340534437424843426538514350649ATPase family associated with various cellular activities (AAA)
6740655236464846376034444647668ABC transporter
12815969129547111013130ATP synthase alpha/beta family, nucleotide-binding domain
13217EGF-like domain
2520231721192120173018242021296Elongation factor Tu GTP binding domain
7537763735443541387439524452679Helix-loop-helix DNA-binding domain
4447335214734464Hsp20/alpha crystallin family
1914191114201219171810182717235Hsp70 protein
199171410111213112213161114192KH domain
11Ribulose bisphosphate carboxylase large chain, catalytic domain
111115SH2 domain
8932584139353741329148553839675SH3 domain
1612141114141115111811151214188Actin
71141942149371212954565811454Ankyrin repeat
1581812910101210139111213162ADP-ribosylation factor family
3519372718213322203820352432381Eukaryotic aspartyl protease
779756777127978105Cyclic nucleotide-binding domain
112Cytochrome b/b6/petB
2131211113221223Cytochrome c
1111111111112115Double-stranded RNA binding motif
5422432135355334821281EF hand
111415134Fe-4S binding domain
211111111111Fibronectin type III domain
412242217Globin
203913787113191112710140Glutathione S-transferase, C-terminal domain
6353133336344552Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
5521452722232821255129372327434Homeodomain
8395555466345573lactate/malate dehydrogenase, NAD binding domain
22Lectin C-type domain
2115251714171616142816191616250Myosin head (motor domain)
8532604120345445316335484855651Cytochrome P450
3582213452372132342202442133862102962502533,680Protein kinase domain
2313251812171616162815211615251Pyridine nucleotide-disulphide oxidoreductase
8250846042605461548551657265885Ras family
3018291515181817182717211821282Response regulator receiver domain
112312111RNase H
137851258891919710190165961121041011,483RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
14950Retroviral aspartyl protease
134547011521Reverse transcriptase (RNA-dependent DNA polymerase)
55113332336353257Copper/zinc superoxide dismutase (SODC)
1112111112121218Iron/manganese superoxide dismutases, alpha-hairpin domain
3122241613162418182715241921288Subtilase family
6630564726342827254222463740526Sugar (and other) transporter
1816211514151315142416151415225Thioredoxin
11Thyroglobulin type-1 repeat
5124222225342238Trypsin
1335878928981187106Tubulin/FtsZ family, GTPase domain
11von Willebrand factor type A domain
11WAP-type (Whey Acidic Protein) 'four-disulfide core'
1742756140292920335281478713838441,175Zinc finger, C2H2 type
9610116474551377760411113469Zinc finger, C3HC4 type (RING finger)
1827114591770301237231321310454Zinc knuckle
7576565758587586Protein-tyrosine phosphatase
4935584528343331304927313040520short chain dehydrogenase
4625522921192326113923282337402Zinc-binding dehydrogenase
96111068575115778105Thiolase, N-terminal domain
3243432223232237Beta-ketoacyl synthase, N-terminal domain
5124141184511382Fe-2S iron-sulfur cluster binding domain
3232122224222534Enolase, C-terminal TIM barrel domain
22Cytochrome C and Quinol oxidase polypeptide I
112Cytochrome C oxidase subunit II, periplasmic domain
131016989101181799119149Glutamine amidotransferase class-I
1512141112111513121611181315188TCP-1/cpn60 chaperonin family
95654568310566583Glutamine synthetase, catalytic domain
2181111112111123Triosephosphate isomerase
4933523034402637344826344339525E1-E2 ATPase
211417141414201416131420148213Core histone H2A/H2B/H3/H4
212111111413120Alpha amylase, catalytic domain
1710154911710112411131110163Phorbol esters/diacylglycerol binding domain (C1 domain)
8698775781789811118Bacterial transferase hexapeptide (six repeats)
6674674768476785tRNA synthetases class I (I, L, M and V)
1815291814191818153320171718269Cyclin, N-terminal domain
2223121132132227Carboxylesterase family
5555554558466674DNA polymerase family B
8345344348453563ATP synthase subunit C
111111111111214Legume lectin domain
4354242326333448Peroxidase
1124Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
11111121211114Beta-lactamase
1222214142111125C-5 cytosine-specific DNA methylase
11114NADH dehydrogenase
4930493732363434305033373636523Calcineurin-like phosphoesterase
5563344446445764Cellulase (glycosyl hydrolase family 5)
85766666610676792tRNA synthetases class II (D, K and N)
8056846353615462609052636472914Mitochondrial carrier protein
11recA bacterial DNA recombination protein
2717312018202019193418222022307Aminotransferase class I and II
14481367116616101576129Phosphoribosyl transferase domain
1514161514151415132716171515221Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1122111112121219Phosphoglycerate kinase
3353333342353346Ribosomal protein S4/S9 N-terminal domain
4474344446464361Ribosomal protein S12/S23
1222122211111221Chaperonin 10 Kd subunit
3617292321192217194120261820328C2 domain
85325144273548353910253603530676PH domain
4831572827311933304926383639492bZIP transcription factor
2014221513151215172212151618226Aldehyde dehydrogenase family
9243894640574750407752304654763Fungal Zn(2)-Cys(6) binuclear cluster domain
6031544131343932306937413140570Cytochrome b5-like Heme/Steroid binding domain
221212111111117Oxidoreductase molybdopterin binding domain
1914211612141314112313141415213Oxidoreductase NAD-binding domain
2621262022242023273622262227342SNF2 family N-terminal domain
4464343446354458Ribosomal protein S7p/S5e
2618262222222022204322262325337Ubiquitin-conjugating enzyme
11798678871279910118Isocitrate/isopropylmalate dehydrogenase
6465444554455566Ribosomal Proteins L2, RNA binding domain
5474344438454564Hsp90 protein
4233226334243243Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
2222222224212128Dihydrofolate reductase
444613151422101158Cysteine-rich secretory protein family
5455454453334559Ribosomal protein S3, C-terminal domain
65563546564666732-oxoacid dehydrogenases acyltransferase (catalytic domain)
7584342446345463Catalase
6353332332233243Disintegrin
2010231059164117121211141UDP-glucoronosyl and UDP-glucosyl transferase
8676566589565688Aminotransferase class-III
7554344434354459Ribosomal protein S19
1111111112111115DNA gyrase B
741065536343510677Thiamine pyrophosphate enzyme, central domain
4444444356344558Lyase
5253233337333348Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
1232222143232231Ferritin-like domain
4242222224232235Adenylate and Guanylate cyclase catalytic domain
2121111112121118ATP synthase delta (OSCP) subunit
1111111111111114Orotidine 5'-phosphate decarboxylase / HUMPS family
2121111111111217Indole-3-glycerol phosphate synthase
4363333336354251Pyruvate kinase, barrel domain
3626302824292030304628332630416Kinesin motor domain
4532523933423437376737384038571DnaJ domain
1714241414141414142614261416235Proteasome subunit
1242222311123632Major intrinsic protein
2222122212122225ATP synthase
12615877677968781133'5'-cyclic nucleotide phosphodiesterase
1111111113221219Profilin
5474345448454667Ribosomal protein L22p/L17e
4353333334363248Ribosomal protein L14p/L23e
3120282217172326203521282135344Ubiquitin family
771066747612687699Cofilin/tropomyosin-type actin-binding protein
636333343847456214-3-3 protein
5374333445344658Alkaline phosphatase
4215342612182015193418191527314Aldo/keto reductase family
3918322324192024246133332126397Myb-like DNA-binding domain
1410201091010109136121010153Forkhead domain
112Glycosyl hydrolases family 32 N-terminal domain
1421441442124438Ribosomal protein L16p/L10e
5354434432343451Ribosomal protein S14p/S29e
95765466710566789FKBP-type peptidyl-prolyl cis-trans isomerase
2221222213232228Glutathione peroxidase
55364427
211016158913109201114912177Flavodoxin
1121112112121118Calreticulin family
96876858595571199Aminotransferase class-V
3153231122122331Ribonucleotide reductase, small chain
5252634858524753548547575560783DEAD/DEAH box helicase
997796818084748182128778482861,211Helicase conserved C-terminal domain
2111111112111116EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
5354443444354456Ribosomal protein L23
311111111121318Pyridoxal-dependent decarboxylase, C-terminal sheet domain
5473335455474564Ribosomal protein L5
6474345445344461Pyridoxal-dependent decarboxylase conserved domain
2251222322113331Citrate synthase, C-terminal domain
76666666612666691GHMP kinases N terminal domain
12714119911971689109141Biotin carboxylase, N-terminal domain
1111111112121116Tryptophan synthase alpha chain
12910109999915910913142Pyridoxal-phosphate dependent enzyme
1157'Paired box' domain
2617252320201622173920232223313NUDIX domain
106776665510666793pfkB family carbohydrate kinase
5629277185667Glycosyl hydrolases family 28
5464343435354558Ribosomal protein L3
6374445447474568Ribosomal protein L11, RNA binding domain
1381511101111121016107910153Histidine phosphatase superfamily (branch 1)
1111111112111115Thymidylate synthase
11Gamma-thionin family
11815969129537111012127ATP synthase alpha/beta chain, C terminal domain
137191271091412211291318176Calponin homology (CH) domain
213Bacterial dnaA protein
103612456549685790Glutamine amidotransferases class-II
3343222336353244Ribosomal protein S15
211212221212120'Cold-shock' DNA-binding domain
7374355548465571Thaumatin family
111111112121115Fructose-1-6-bisphosphatase, N-terminal domain
5274442426334454Ribonucleotide reductase, all-alpha domain
7564344544365565Ribosomal protein S2
1481410109796149999137SRF-type transcription factor (DNA-binding and dimerisation domain)
6536733632383539286839394344615GATA zinc finger
3571521810198734182498223Amino acid permease
97106676671267610105Prolyl oligopeptidase family
6465555568476476Ribosomal protein L30p/L7e
6465432347453460Histidine phosphatase superfamily (branch 2)
2111111112111116Respiratory-chain NADH dehydrogenase, 30 Kd subunit
6466465569565881Aconitase family (aconitate hydratase)
422331222323231Glycosyl hydrolases family 17
5454435343363456Ribosomal protein S5, N-terminal domain
6586664559556682Nucleoside diphosphate kinase
7496565452314667Tetraspanin family
3343333336363349Ribosomal protein S10p/S20e
4629572225332233353220173240443Arrestin (or S-antigen), N-terminal domain
1111111112111115Phosphoglucose isomerase
323212223222228Carbohydrate phosphorylase
4242222224232235SecY translocase
1121111112121117Respiratory-chain NADH dehydrogenase, 49 Kd subunit
4343334336343450Ribosomal protein L6
6565554569555778Polyprenyl synthetase
171018119107119168111112160Hexokinase
99117710886137898120Dynamin family
1111111112121116Biopterin-dependent aromatic amino acid hydroxylase
3132222221122126Transcription factor TFIID (or TATA-binding protein, TBP)
5465345455444462Rieske [2Fe-2S] domain
213Proton-conducting membrane transporter
159141211131013111910121414177Biotin-requiring enzyme
4242222224222133Phosphofructokinase
3232222231232332Ribosomal protein S17
2243231223223435Hydroxymethylglutaryl-coenzyme A reductase
96765666512675692FGGY family of carbohydrate kinases, N-terminal domain
3132121232112327Sodium:dicarboxylate symporter family
1781414101111982312131513178Enoyl-CoA hydratase/isomerase
5344344348464460Ribosomal protein S9/S16
11114PTS HPr component phosphorylation site
3333233344233443Transcription factor TFIIB repeat
10479484951065109100Cytidine and deoxycytidylate deaminase zinc-binding region
21211121212117Molybdopterin oxidoreductase
23122099182215937182391913463Chromo (CHRromatin Organisation MOdifier) domain
11114Phosphatidylinositol-specific phospholipase C, X domain
6375455448565572D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
73105354558555575Malic enzyme, N-terminal domain
31431222242322336-phosphogluconate dehydrogenase, C-terminal domain
7695555667357884Multicopper oxidase
26132081112716112513171914212WW domain
3333433336333245Ribosomal RNA adenine dimethylase
2041551921581551641621701682881571731711802,497WD domain, G-beta repeat
11Calponin family repeat
5555444555336564Heavy-metal-associated domain
84866655510555684Adenylate kinase
2342322334233339Phosphoglucomutase/phosphomannomutase, C-terminal domain
5263333336353351Ribosomal protein S8
4354423246333349Ribosomal protein S11
1916241315161414142415111615226LIM domain
3581654788467678Regulator of chromosome condensation (RCC1) repeat
4374342444454456Ribosomal protein S13/S18
21111112111114Tau and MAP protein, tubulin-binding repeat
11NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
4222222223222231chorismate binding enzyme
1589868786137118712160s Acidic ribosomal protein
4354344448443458Prenyltransferase and squalene oxidase repeat
17912981011117171014109154Protein kinase C terminal domain
112Spectrin repeat
1121111212121118Single-strand binding protein family
11Type II/IV secretion system protein
212111112212118S-adenosylmethionine synthetase, N-terminal domain
2317252016181417162718181917265Bromodomain
2115261516161616162517201622257Acyl-CoA dehydrogenase, C-terminal domain
2719232619202122204322252821336Ubiquitin carboxyl-terminal hydrolase
111111111110Ribosomal protein L36
2231114114321430Ribonuclease T2 family
2918312019191417162514181919278HSF-type DNA-binding
2222232224223232SRP54-type protein, GTPase domain
3122122222112225Urease alpha-subunit, N-terminal domain
7475467567476681Serine carboxypeptidase
1513131312121012112112121311180Phosphatidylinositol 3- and 4-kinase
6232122223223234Transketolase, thiamine diphosphate binding domain
111111112111114WHEP-TRS domain
2232222224222231Inositol monophosphatase family
8611106858121366610115Glutaredoxin
4242221224222334Isocitrate lyase family
2232222224222231Serine hydroxymethyltransferase
2111111112121117Iron-containing alcohol dehydrogenase
3464342435354353Ribosomal protein L10
14817101198712762389149KOW motif
1111111112111115Ribosomal protein L34
111111112111114Ribosomal protein L33
3333332335333343RF-1 domain
12112111111Sodium:solute symporter family
2111111112111116Imidazoleglycerol-phosphate dehydratase
1111111111111114DNA polymerase family A
3122121212122224IMP dehydrogenase / GMP reductase domain
5243333334242344Glucose-6-phosphate dehydrogenase, NAD binding domain
1791710910111091811171010168Protein phosphatase 2C
769676476116671098Nucleotidyl transferase
3132212221112225Carbonic anhydrase
3332421224232235Phosphoribulokinase / Uridine kinase family