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PFAM Domains • Puccinia coronata avenae 12NC29
Annotations/GenomesCroqu1Melap1finSC_191Melli1Mellp2_3PuccoNC29_1PuccoSD80_1Pucgr2Pucst1Pucst_PST78_1Puctr1TotalAnnotation Description
PFAMs
5,9958,7506,7647,96013,81512,7866,6466,2279,9817,24986,173
11137 transmembrane receptor (rhodopsin family)
32352933525138263839373ATPase family associated with various cellular activities (AAA)
28342730514928283131337ABC transporter
447476546451ATP synthase alpha/beta family, nucleotide-binding domain
112EGF-like domain
12151213212017121413149Elongation factor Tu GTP binding domain
7775139899882Helix-loop-helix DNA-binding domain
554476456349Hsp20/alpha crystallin family
8119719208131420129Hsp70 protein
85881013888985KH domain
22Methyl-accepting chemotaxis protein (MCP) signalling domain
111115SH2 domain
23152715403330261928256SH3 domain
91481014179998107Actin
158152991716520116Ankyrin repeat
112PAN domain
979818151081111106ADP-ribosylation factor family
19272125352615141715214Eukaryotic aspartyl protease
353364324437Cyclic nucleotide-binding domain
224Cytochrome b(C-terminal)/b6/petD
11Cytochrome b/b6/petB
11111111210Cytochrome c
11222111112Double-stranded RNA binding motif
162152342221323111EF hand
12212212134Fe-4S binding domain
1113Fibronectin type III domain
665598865765Glutathione S-transferase, C-terminal domain
122263121121Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
7857161596101396Homeodomain
112Laminin EGF domain
222341222222lactate/malate dehydrogenase, NAD binding domain
4145914135710687Myosin head (motor domain)
26352030343317202214251Cytochrome P450
1261551241271941801211241521311,434Protein kinase domain
1015881514116811106Pyridine nucleotide-disulphide oxidoreductase
26802134454025232522341Ras family
910101315189141611125Response regulator receiver domain
2697641711143RNase H
6970646111411285738489821RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
34411Retroviral aspartyl protease
1512932282125Reverse transcriptase (RNA-dependent DNA polymerase)
31327141116101710103Copper/zinc superoxide dismutase (SODC)
224422223225Iron/manganese superoxide dismutases, alpha-hairpin domain
9151013273114111711158Subtilase family
22272023312317212218224Sugar (and other) transporter
9101113222010151610136Thioredoxin
11Trypsin
551051086671173Tubulin/FtsZ family, GTPase domain
21222211von Willebrand factor type A domain
45284523504666412670440Zinc finger, C2H2 type
4143247611775787380Zinc finger, C3HC4 type (RING finger)
428245155943974884147788Zinc knuckle
232344355233Protein-tyrosine phosphatase
27362637574232263538356short chain dehydrogenase
12161114161311121210127Zinc-binding dehydrogenase
756565455654Thiolase, N-terminal domain
251131211320Beta-ketoacyl synthase, N-terminal domain
3322222213222Fe-2S iron-sulfur cluster binding domain
111122111213Enolase, C-terminal TIM barrel domain
134Cytochrome C and Quinol oxidase polypeptide I
7127814137681092Glutamine amidotransferase class-I
10211212181812141516148TCP-1/cpn60 chaperonin family
1135ATP synthase A chain
343354344336Glutamine synthetase, catalytic domain
112144111117Triosephosphate isomerase
1019920333211172619196E1-E2 ATPase
22Photosynthetic reaction centre protein
16222120272623152319212Core histone H2A/H2B/H3/H4
314Bacterial regulatory helix-turn-helix protein, lysR family
112Copper binding proteins, plastocyanin/azurin family
576686434655Alpha amylase, catalytic domain
323265614436Phorbol esters/diacylglycerol binding domain (C1 domain)
8117101013976788Bacterial transferase hexapeptide (six repeats)
364576585756tRNA synthetases class I (I, L, M and V)
814141218151261315127Cyclin, N-terminal domain
1023132513105799124Carboxylesterase family
484479665659DNA polymerase family B
433375325338ATP synthase subunit C
222266222430Peroxidase
11Beta-lactamase
222234234327C-5 cytosine-specific DNA methylase
235NADH dehydrogenase
22191816303020182321217Calcineurin-like phosphoesterase
61981626251082410152Cellulase (glycosyl hydrolase family 5)
44441194751264tRNA synthetases class II (D, K and N)
33413136696137414643438Mitochondrial carrier protein
16191416212216172213176Aminotransferase class I and II
646456893758Phosphoribosyl transferase domain
12151514272214131516163Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
11111111614Phosphoglycerate kinase
223232222222Ribosomal protein S4/S9 N-terminal domain
222334322326Ribosomal protein S12/S23
11Bacterial regulatory helix-turn-helix proteins, AraC family
112121112113Chaperonin 10 Kd subunit
101110121415710118108C2 domain
20152011251721151326183PH domain
413391611739782bZIP transcription factor
13171416201911182116165Aldehyde dehydrogenase family
33262724393529192331286Fungal Zn(2)-Cys(6) binuclear cluster domain
18211618283119212021213Cytochrome b5-like Heme/Steroid binding domain
11114Oxidoreductase molybdopterin binding domain
696776657564Oxidoreductase NAD-binding domain
172627234727482734111387SNF2 family N-terminal domain
222343222628Ribosomal protein S7p/S5e
20221819383417182118225Ubiquitin-conjugating enzyme
57651011265966Isocitrate/isopropylmalate dehydrogenase
222243212222Ribosomal Proteins L2, RNA binding domain
223255122226Hsp90 protein
235443244233Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
111122122114Dihydrofolate reductase
101251187766476Cysteine-rich secretory protein family
113112211114Ribosomal protein S3, C-terminal domain
12115Cupin
3546663455472-oxoacid dehydrogenases acyltransferase (catalytic domain)
5104987754362Catalase
221254233428Disintegrin
52910531UDP-glucoronosyl and UDP-glucosyl transferase
5443891057560Aminotransferase class-III
22223424122Ribosomal protein S19
111122211113DNA gyrase B
244522111426Thiamine pyrophosphate enzyme, central domain
355376324543Lyase
121122111113Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
11Sodium:neurotransmitter symporter family
111122111112Adenylate and Guanylate cyclase catalytic domain
111121111111ATP synthase delta (OSCP) subunit
11142111113Orotidine 5'-phosphate decarboxylase / HUMPS family
111121111313Indole-3-glycerol phosphate synthase
422544222229Aromatic amino acid lyase
33Photosystem I psaA/psaB protein
112122112114Pyruvate kinase, barrel domain
1120810211814121519148Kinesin motor domain
33523350645332323936424DnaJ domain
19171414272815131716180Proteasome subunit
13261523201511121410159Major intrinsic protein
111121122113ATP synthase
1111221122143'5'-cyclic nucleotide phosphodiesterase
121122111113Profilin
222133114120Ribosomal protein L22p/L17e
223266212228Ribosomal protein L14p/L23e
1110141015121191112115Ubiquitin family
455486446450Cofilin/tropomyosin-type actin-binding protein
22524322232714-3-3 protein
212132321320Alkaline phosphatase
9131613101013101212118Aldo/keto reductase family
12611711127119894Myb-like DNA-binding domain
543566223339Forkhead domain
433334222228Glycosyl hydrolases family 32 N-terminal domain
122221112115Ribosomal protein L16p/L10e
221244222223Ribosomal protein S14p/S29e
545457444446FKBP-type peptidyl-prolyl cis-trans isomerase
1111111119Glutathione peroxidase
121127
4115464555554Flavodoxin
121112111112Calreticulin family
8858131226466Common central domain of tyrosinase
45551210547461Aminotransferase class-V
11Gram-negative porin
111221111112Ribonucleotide reductase, small chain
36573860162140794812956805DEAD/DEAH box helicase
637797751641471691201431561,211Helicase conserved C-terminal domain
111121321114EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
121142112116Ribosomal protein L23
123122111115Pyridoxal-dependent decarboxylase, C-terminal sheet domain
121121111112Ribosomal protein L5
574543213236Pyridoxal-dependent decarboxylase conserved domain
232349225234Citrate synthase, C-terminal domain
4568910655664GHMP kinases N terminal domain
512781210555978Biotin carboxylase, N-terminal domain
122145222223Tryptophan synthase alpha chain
6896131681081195Pyridoxal-phosphate dependent enzyme
12201216211711121812151NUDIX domain
53361010544555pfkB family carbohydrate kinase
121312112115Glycosyl hydrolases family 28
233243222225Ribosomal protein L3
221144112119Ribosomal protein L11, RNA binding domain
712891817138108110Histidine phosphatase superfamily (branch 1)
111121143217Thymidylate synthase
448476514447ATP synthase alpha/beta chain, C terminal domain
56551010755563Calponin homology (CH) domain
636366845754Glutamine amidotransferases class-II
223223332224Ribosomal protein S15
343364323435'Cold-shock' DNA-binding domain
23231412846660Thaumatin family
221112123217Fructose-1-6-bisphosphatase, N-terminal domain
11212111111Ribonucleotide reductase, all-alpha domain
233234333430Ribosomal protein S2
322343222225SRF-type transcription factor (DNA-binding and dimerisation domain)
71068978781181GATA zinc finger
19111411222222151022168Amino acid permease
4754964461160Prolyl oligopeptidase family
231244113122Ribosomal protein L30p/L7e
564478575556Histidine phosphatase superfamily (branch 2)
111222112114Respiratory-chain NADH dehydrogenase, 30 Kd subunit
4455136466659Aconitase family (aconitate hydratase)
674554545449Glycosyl hydrolase family 10
1112212111Glycosyl hydrolases family 17
222233222222Ribosomal protein S5, N-terminal domain
322222112118Nucleoside diphosphate kinase
1113Tetraspanin family
112253112119Ribosomal protein S10p/S20e
5354113123Arrestin (or S-antigen), N-terminal domain
221112112316Phosphoglucose isomerase
11Carbohydrate phosphorylase
111121212214SecY translocase
112Pili and flagellar-assembly chaperone, PapD N-terminal domain
112113111113Respiratory-chain NADH dehydrogenase, 49 Kd subunit
221264422429Ribosomal protein L6
376654468756Polyprenyl synthetase
222367522233Hexokinase
442413116611667Dynamin family
11Biopterin-dependent aromatic amino acid hydroxylase
111122111213Transcription factor TFIID (or TATA-binding protein, TBP)
333324333330Rieske [2Fe-2S] domain
11Bacterial regulatory proteins, lacI family
11phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
111122113316Phytochrome region
232714Proton-conducting membrane transporter
7101091010789888Biotin-requiring enzyme
131222152120Phosphofructokinase
222244223225Ribosomal protein S17
11phosphotransferase system, EIIB
111222133117Hydroxymethylglutaryl-coenzyme A reductase
333344532434FGGY family of carbohydrate kinases, N-terminal domain
22Hemocyanin, copper containing domain
812111011128911799Enoyl-CoA hydratase/isomerase
232343223226Ribosomal protein S9/S16
522243323329Transcription factor TFIIB repeat
5434109523752Cytidine and deoxycytidylate deaminase zinc-binding region
111123132116Molybdopterin oxidoreductase
75215129633224124Chromo (CHRromatin Organisation MOdifier) domain
111121111111Phosphatidylinositol-specific phospholipase C, Y domain
222242212221Phosphatidylinositol-specific phospholipase C, X domain
342311111118D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
111121211112Malic enzyme, N-terminal domain
1121341212186-phosphogluconate dehydrogenase, C-terminal domain
201672120181291213148Multicopper oxidase
98871211767681WW domain
111144121319Ribosomal RNA adenine dimethylase
97106991061831821091091221131,226WD domain, G-beta repeat
222255222327Heavy-metal-associated domain
345667445448Adenylate kinase
122244213122Phosphoglucomutase/phosphomannomutase, C-terminal domain
161244212124Ribosomal protein S8
112122211114Ribosomal protein S11
65571311666671LIM domain
11Matrixin
243356123231Regulator of chromosome condensation (RCC1) repeat
221234223223Ribosomal protein S13/S18
11
44Fimbrial protein
11NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
11Photosystem II protein
22221311423344chorismate binding enzyme
34435623343760s Acidic ribosomal protein
637887976869Prenyltransferase and squalene oxidase repeat
75941211896879Protein kinase C terminal domain
11Spectrin repeat
12211119Single-strand binding protein family
111121211213S-adenosylmethionine synthetase, N-terminal domain
8108102016991210112Bromodomain
11Bacterial regulatory proteins, tetR family
898111616119119108Acyl-CoA dehydrogenase, C-terminal domain
19191316262114151917179Ubiquitin carboxyl-terminal hydrolase
1112211211Ribosomal protein L36
111122111112Ribonuclease T2 family
54551086411866HSF-type DNA-binding
32244233225SRP54-type protein, GTPase domain
111122211517Urease alpha-subunit, N-terminal domain
10141012232214201715157Serine carboxypeptidase
11Ribosomal protein L20
787121415881114104Phosphatidylinositol 3- and 4-kinase
111221111213Transketolase, thiamine diphosphate binding domain
1144211216WHEP-TRS domain
222343223225Inositol monophosphatase family
49761010565668Glutaredoxin
222253223528Isocitrate lyase family
111554211223Serine hydroxymethyltransferase
111221111112Iron-containing alcohol dehydrogenase
222244222224Ribosomal protein L10
324264433334KOW motif
111132121215Ribosomal protein L34
111115Ribosomal protein L33
231445224431RF-1 domain
11Sodium:solute symporter family
112122122216Imidazoleglycerol-phosphate dehydratase
111121112112DNA polymerase family A
111222111113IMP dehydrogenase / GMP reductase domain
11122213215Glucose-6-phosphate dehydrogenase, NAD binding domain
654688656761Protein phosphatase 2C
444555322236Nucleotidyl transferase
311222223119Carbonic anhydrase
112Phosphoribulokinase / Uridine kinase family
61086101271212891Fatty acid desaturase
65561412668977MutS domain V
11182122220Delta-aminolevulinic acid dehydratase
111141111214Arginase family
666121110776879MCM P-loop domain
232366224232Squalene/phytoene synthase
11Bacterial extracellular solute-binding proteins, family 3
566914136411680FHA domain
11NADH-ubiquinone/plastoquinone oxidoreductase chain 6
20201619231814121315170AMP-binding enzyme
128551111687881G-protein alpha subunit
7911714131178895HMG (high mobility group) box
112NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
123Cytochrome c oxidase subunit III
6676775591270His Kinase A (phospho-acceptor) domain
424242223429Armadillo/beta-catenin-like repeat
2211198202128221327191Tetratricopeptide repeat
224355222532Ion transport protein
311122212116DNA gyrase/topoisomerase IV, subunit A
112Binding-protein-dependent transport system inner membrane component
9710617156981097BRCA1 C Terminus (BRCT) domain
5555109656763Glycosyl transferases group 1
414244323229Glycosyl transferase family 2
1112122111SAM domain (Sterile alpha motif)
11112212516linker histone H1 and H5 family
111122111112Ribosomal protein L7/L12 C-terminal domain
74138922238Pectate lyase
111122211517Urease, gamma subunit
333346534438CoA-ligase
444445433338Phosphopantetheine attachment site
323387223538Formyl transferase
71081113137812796Metallopeptidase family M24
172174651615316101Leucine Rich Repeat
204183461915417110alpha/beta hydrolase fold
345387333443RNA polymerase Rpb2, domain 6
11EAL domain
332398446345PB1 domain
23224222221Staphylococcal nuclease homologue
919131214157696110Rab-GTPase-TBC domain
111211119Tudor domain
113121211215WH1 domain
446477414344Zinc finger, ZZ type
121116HRDC domain
7667109766973CBS domain
223154222326Ribosomal protein L13
234244222227Ribosomal protein L4/L1 family
11211219Clp protease
443489556452S1 RNA binding domain
112111111111HIUase/Transthyretin family
22Outer membrane usher protein
225333223227AhpC/TSA family
445496456754tRNA synthetases class I (W and Y)
12122112113UvrD/REP helicase N-terminal domain
61068141055101084Rhodanese-like domain
333344212328Universal stress protein family
1189915121191314111Acetyltransferase (GNAT) family
11122111111SecE/Sec61-gamma subunits of protein translocation complex
112121111213C-terminal regulatory domain of Threonine dehydratase
222243222223AIR synthase related protein, N-terminal domain
87761111886880tRNA synthetase class II core domain (G, H, P, S and T)
6114315Phage integrase family
122221112115Tetrapyrrole (Corrin/Porphyrin) Methylases
111155134325Glycosyl transferase family, a/b domain
22TonB dependent receptor
11PDZ domain
232243233428Class II Aldolase and Adducin N-terminal domain
11gag gene protein p24 (core nucleocapsid protein)
22Adenoviral fibre protein (repeat/shaft region)
332368424338Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
610581615748786Fes/CIP4, and EFC/F-BAR homology domain
22221533222IQ calmodulin-binding motif
221366223330Phosphoinositide 3-kinase family, accessory domain (PIK domain)
322243442329Phospholipase D Active site motif
131454116127Regulator of G protein signaling domain
46431111687868GTPase-activator protein for Ras-like GTPase
45461111457461RasGEF domain
433386445444RasGEF N-terminal motif
11111015211815141413142RhoGAP domain
15161316282416141916177RhoGEF domain
221244322224SPRY domain
374375334342RNA polymerase Rpb1, domain 2
112122111