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PFAM Domains • Schizophyllum commune ZB1 v1.0
Annotations/GenomesSchco2071_1Schco2231_1Schco2251_1Schco2271_1Schco2272_1Schco3SchcoZB1SchcoZB2Schco_LoeD_1Schco_TatD_1Schrad1TotalAnnotation Description
PFAMs
10,08010,17210,13510,15110,1458,59010,13010,1498,2888,42212,180108,442
111147 transmembrane receptor (rhodopsin family)
3940394039433940474447457ATPase family associated with various cellular activities (AAA)
4647454344464747454657513ABC transporter
4444444444747ATP synthase alpha/beta family, nucleotide-binding domain
1113EGF-like domain
1515151515151515151518168Elongation factor Tu GTP binding domain
1413131313131313121213142Helix-loop-helix DNA-binding domain
999910910109912105Hsp20/alpha crystallin family
7999777777884Hsp70 protein
8888898888889KH domain
1113SH2 domain
1715161617271417272625217SH3 domain
1111111111111111111115125Actin
138751060101059589249Ankyrin repeat
7677776777775ADP-ribosylation factor family
2424242424262424242430272Eukaryotic aspartyl protease
4444435433543Cyclic nucleotide-binding domain
1111111111111Cytochrome c
1110911813109121211116Double-stranded RNA binding motif
1111120111820166EF hand
11134Fe-4S binding domain
11114Fibronectin type III domain
1111111111111Globin
87988159813146105Glutathione S-transferase, C-terminal domain
1111111111111Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
1211121212111212111114130Homeodomain
2222222222424lactate/malate dehydrogenase, NAD binding domain
6666668666971Myosin head (motor domain)
1151131181131181141161151101141461,292Cytochrome P450
1891931891821901621881921521542332,024Protein kinase domain
1213131211111213121114134Pyridine nucleotide-disulphide oxidoreductase
3029303029272929272729316Ras family
1212131212121212121214135Response regulator receiver domain
81020161710212331027165RNase H
6264646263705858706969709RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
1113Reverse transcriptase (RNA-dependent DNA polymerase)
2222232233326Iron/manganese superoxide dismutases, alpha-hairpin domain
7777737733866Subtilase family
4647525446414846434363529Sugar (and other) transporter
1414141313131413121318151Thioredoxin
5555555555555Tubulin/FtsZ family, GTPase domain
3339von Willebrand factor type A domain
4244434939100414110010158658Zinc finger, C2H2 type
1111101314711111596314288Zinc finger, C3HC4 type (RING finger)
991212112298182414148Zinc knuckle
2222222222222Protein-tyrosine phosphatase
1121141121151161121111191161181301,275short chain dehydrogenase
4242444442474244464553491Zinc-binding dehydrogenase
5655545544856Thiolase, N-terminal domain
1111131122317Beta-ketoacyl synthase, N-terminal domain
11111311331172Fe-2S iron-sulfur cluster binding domain
1111111111212Enolase, C-terminal TIM barrel domain
88888898881192Glutamine amidotransferase class-I
1010101110101010101014115TCP-1/cpn60 chaperonin family
3333333333333Glutamine synthetase, catalytic domain
1111111111111Triosephosphate isomerase
1415141614914149919147E1-E2 ATPase
1315181615221714171822187Core histone H2A/H2B/H3/H4
2226Copper binding proteins, plastocyanin/azurin family
1212121212121212121215135Alpha amylase, catalytic domain
5555555566557Phorbol esters/diacylglycerol binding domain (C1 domain)
3333343344437Bacterial transferase hexapeptide (six repeats)
55554345451055tRNA synthetases class I (I, L, M and V)
131413141413131311915142Cyclin, N-terminal domain
2121212222262222222230251Carboxylesterase family
4444444434443DNA polymerase family B
3333333333333ATP synthase subunit C
2222222222323Peroxidase
3544434444544Beta-lactamase
5656566566763C-5 cytosine-specific DNA methylase
2120222322242222242426250Calcineurin-like phosphoesterase
1615151616615157719147Cellulase (glycosyl hydrolase family 5)
6666666666868tRNA synthetases class II (D, K and N)
3737373738373737393743416Mitochondrial carrier protein
1111116recA bacterial DNA recombination protein
1718171817161717171720191Aminotransferase class I and II
4444474466350Phosphoribosyl transferase domain
1414141414141414141318157Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1111111111111Phosphoglycerate kinase
2222222222323Ribosomal protein S4/S9 N-terminal domain
2222222222222Ribosomal protein S12/S23
1111111111212Chaperonin 10 Kd subunit
1616161616181616171719183C2 domain
998881989181813127PH domain
71088867867984bZIP transcription factor
1717191717161717181724196Aldehyde dehydrogenase family
6566656766886564768364769Fungal Zn(2)-Cys(6) binuclear cluster domain
2221222322252221252426253Cytochrome b5-like Heme/Steroid binding domain
1111111111111Oxidoreductase molybdopterin binding domain
78777117887885Oxidoreductase NAD-binding domain
2222222322222222222327249SNF2 family N-terminal domain
2222222222323Ribosomal protein S7p/S5e
2222222221212221212125240Ubiquitin-conjugating enzyme
5555555555555Isocitrate/isopropylmalate dehydrogenase
2222222222222Ribosomal Proteins L2, RNA binding domain
2322232332428Hsp90 protein
2222222222323Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1111111111111Dihydrofolate reductase
5555556555556Cysteine-rich secretory protein family
1111111111111Ribosomal protein S3, C-terminal domain
3234333344234Cupin
33333333334342-oxoacid dehydrogenases acyltransferase (catalytic domain)
3222222222223Catalase
1111111111111Disintegrin
78666186111060UDP-glucoronosyl and UDP-glucosyl transferase
7555654445656Aminotransferase class-III
2222222222222Ribosomal protein S19
1111111111111DNA gyrase B
4444444444444Thiamine pyrophosphate enzyme, central domain
3333333333333Lyase
2223223322225Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
1111111111111Adenylate and Guanylate cyclase catalytic domain
1111111111111ATP synthase delta (OSCP) subunit
1111111111111Orotidine 5'-phosphate decarboxylase / HUMPS family
1111121111112Indole-3-glycerol phosphate synthase
2222222222323Aromatic amino acid lyase
1111111111111Pyruvate kinase, barrel domain
10991010101010111110110Kinesin motor domain
2728272726302927312732311DnaJ domain
1514141414141414141414155Proteasome subunit
3333333333333Major intrinsic protein
1111111111111ATP synthase
3333333333333Glycosyl hydrolase family 1
11111111111113'5'-cyclic nucleotide phosphodiesterase
111111111211Profilin
2222212211219Ribosomal protein L22p/L17e
2222222222222Ribosomal protein L14p/L23e
111011119131415131411132Ubiquitin family
5545575555657Cofilin/tropomyosin-type actin-binding protein
222222222222214-3-3 protein
1111131133117Alkaline phosphatase
2222222222222Zinc carboxypeptidase
5960576059605960565774661Aldo/keto reductase family
8898811781111897Myb-like DNA-binding domain
9989108910981099Forkhead domain
1121222111115Glycosyl hydrolases family 32 N-terminal domain
2222212211219Ribosomal protein L16p/L10e
2222222222222Ribosomal protein S14p/S29e
5586555556661FKBP-type peptidyl-prolyl cis-trans isomerase
1111111111212Glutathione peroxidase
2226
3333373377547Flavodoxin
1211111111112Calreticulin family
1111111111111Common central domain of tyrosinase
1111111111911119912116Aminotransferase class-V
3333333333333Ribonucleotide reductase, small chain
6564646972666578625581741DEAD/DEAH box helicase
888786859097869292921081,003Helicase conserved C-terminal domain
1111111111111EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
2222222222222Ribosomal protein L23
1111111111212Pyridoxal-dependent decarboxylase, C-terminal sheet domain
1111111111111Ribosomal protein L5
66777777671077Pyridoxal-dependent decarboxylase conserved domain
4444434433542Citrate synthase, C-terminal domain
5745555545656GHMP kinases N terminal domain
6555556555759Biotin carboxylase, N-terminal domain
1111111111212Tryptophan synthase alpha chain
99999899781096Pyridoxal-phosphate dependent enzyme
1516161515141515141417166NUDIX domain
6666666666868pfkB family carbohydrate kinase
3333333333434Glycosyl hydrolases family 28
2222232222425Ribosomal protein L3
2122222222221Ribosomal protein L11, RNA binding domain
999999999913103Histidine phosphatase superfamily (branch 1)
1111111111111Thymidylate synthase
4444444444646ATP synthase alpha/beta chain, C terminal domain
4444454454446Calponin homology (CH) domain
2222252255332Glutamine amidotransferases class-II
2222221222322Ribosomal protein S15
1111111111111111111111121Thaumatin family
1111111111212Fructose-1-6-bisphosphatase, N-terminal domain
1111111111111Ribonucleotide reductase, all-alpha domain
2222222222222Ribosomal protein S2
4444444444444SRF-type transcription factor (DNA-binding and dimerisation domain)
1312131313121313131314142GATA zinc finger
1010101010211010182111141Amino acid permease
11Bacterial regulatory proteins, crp family
1010898798771295Prolyl oligopeptidase family
2222212211320Ribosomal protein L30p/L7e
999999999911101Histidine phosphatase superfamily (branch 2)
1111111111111Respiratory-chain NADH dehydrogenase, 30 Kd subunit
4444544444748Aconitase family (aconitate hydratase)
5555555555959Glycosyl hydrolase family 10
2222222222222Glycosyl hydrolases family 17
2222222222323Ribosomal protein S5, N-terminal domain
2222222221221Nucleoside diphosphate kinase
5344414311333Tetraspanin family
2222222222323Ribosomal protein S10p/S20e
6665555644658Arrestin (or S-antigen), N-terminal domain
1112111122114Phosphoglucose isomerase
1111211211113Carbohydrate phosphorylase
1111111111111SecY translocase
2121122313523Respiratory-chain NADH dehydrogenase, 49 Kd subunit
2222222222222Ribosomal protein L6
7777767766774Polyprenyl synthetase
2222222222222Hexokinase
1212121113912127917126Dynamin family
1112111211113Transcription factor TFIID (or TATA-binding protein, TBP)
3333322322329Rieske [2Fe-2S] domain
11Bacterial regulatory proteins, lacI family
111111118Phytochrome region
108998999991099Biotin-requiring enzyme
1111111111111Phosphofructokinase
2222222222222Ribosomal protein S17
1111111111212Hydroxymethylglutaryl-coenzyme A reductase
3434334333437FGGY family of carbohydrate kinases, N-terminal domain
109991099910911104Enoyl-CoA hydratase/isomerase
2222222222323Ribosomal protein S9/S16
2222222222222Transcription factor TFIIB repeat
6666666666666Cytidine and deoxycytidylate deaminase zinc-binding region
1111411111114Molybdopterin oxidoreductase
5768929159181612134Chromo (CHRromatin Organisation MOdifier) domain
3433344343539Phosphatidylinositol-specific phospholipase C, Y domain
4444434433643Phosphatidylinositol-specific phospholipase C, X domain
7777777767877D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
3333333333535Malic enzyme, N-terminal domain
11111222222176-phosphogluconate dehydrogenase, C-terminal domain
6666666666767Multicopper oxidase
9914129999997105WW domain
2222222222222Ribosomal RNA adenine dimethylase
1151191131171161321171191181181431,327WD domain, G-beta repeat
4444444444444Heavy-metal-associated domain
3333333333333Adenylate kinase
2222212222423Phosphoglucomutase/phosphomannomutase, C-terminal domain
2222212211219Ribosomal protein S8
2222212211219Ribosomal protein S11
5655565556760LIM domain
4444434433441Regulator of chromosome condensation (RCC1) repeat
2222222222222Ribosomal protein S13/S18
2222222222222chorismate binding enzyme
333333333333360s Acidic ribosomal protein
4344444444443Prenyltransferase and squalene oxidase repeat
5555574477559Protein kinase C terminal domain
1111111111111Single-strand binding protein family
1111111111111S-adenosylmethionine synthetase, N-terminal domain
101099101110991011108Bromodomain
99999998991099Acyl-CoA dehydrogenase, C-terminal domain
1517161615171616151518176Ubiquitin carboxyl-terminal hydrolase
1111111111111Ribosomal protein L36
1111111111212Ribonuclease T2 family
4444444434342HSF-type DNA-binding
2222222222222SRP54-type protein, GTPase domain
1211121111214Urease alpha-subunit, N-terminal domain
1010101010101011101010111Serine carboxypeptidase
77777877881083Phosphatidylinositol 3- and 4-kinase
3333333333333Transketolase, thiamine diphosphate binding domain
1111111111111Glycosyl hydrolases family 11
1111111111111WHEP-TRS domain
2222272222530Inositol monophosphatase family
6656655555761Glutaredoxin
2222232233225Isocitrate lyase family
1111111111111Serine hydroxymethyltransferase
4444444444646Iron-containing alcohol dehydrogenase
2222222212221Ribosomal protein L10
5855555545860KOW motif
1111111111111Ribosomal protein L34
111111118Ribosomal protein L33
3333333333434RF-1 domain
1111111111111Sodium:solute symporter family
1111111111212Imidazoleglycerol-phosphate dehydratase
1111111111111DNA polymerase family A
1111111111111IMP dehydrogenase / GMP reductase domain
125322131424Glucose-6-phosphate dehydrogenase, NAD binding domain
1212131212131213121214137Protein phosphatase 2C
2222313321324Nucleotidyl transferase
2222222222222Carbonic anhydrase
1111111111111Phosphoribulokinase / Uridine kinase family
1011111210131110131213126Fatty acid desaturase
6666666666666MutS domain V
1111111111212Delta-aminolevulinic acid dehydratase
4444444444747Arginase family
6666666667768MCM P-loop domain
2222212211219Squalene/phytoene synthase
1010101010910109910107FHA domain
3334343138313034333049377AMP-binding enzyme
1618151515151518151620178G-protein alpha subunit
2827262827352830303032321HMG (high mobility group) box
8888898878989His Kinase A (phospho-acceptor) domain
3333343334335Armadillo/beta-catenin-like repeat
1415151516271415242420199Tetratricopeptide repeat
3444434433238Ion transport protein
1111111111111DNA gyrase/topoisomerase IV, subunit A
87888107710111094BRCA1 C Terminus (BRCT) domain
5555575577561Glycosyl transferases group 1
3333343355338Glycosyl transferase family 2
2222232233326SAM domain (Sterile alpha motif)
3323333333231linker histone H1 and H5 family
112gag gene protein p17 (matrix protein)
1111111111212Ribosomal protein L7/L12 C-terminal domain
4444444444444Pectate lyase
2222222222424ribonuclease
1211121111214Urease, gamma subunit
3353333333436CoA-ligase
1212141214161213171317152Phosphopantetheine attachment site
2222222222222Formyl transferase
1212121212111212111112129Metallopeptidase family M24
3433316521515372Leucine Rich Repeat
1315131715511513424718259alpha/beta hydrolase fold
3333333333333RNA polymerase Rpb2, domain 6
5555555566456PB1 domain
2222222222222Staphylococcal nuclease homologue
1212111212111212101114129Rab-GTPase-TBC domain
1111111111111Tudor domain
2212212211218WH1 domain
3333333333434Zinc finger, ZZ type
111111118HRDC domain
8999799998793CBS domain
2222222222121Ribosomal protein L13
2222222222222Ribosomal protein L4/L1 family
1111111111111Clp protease
4444444444545S1 RNA binding domain
1111111111111HIUase/Transthyretin family
5555585566762AhpC/TSA family
4444444444747tRNA synthetases class I (W and Y)
3213112111420UvrD/REP helicase N-terminal domain
8981094101044985Rhodanese-like domain
2222222222222Universal stress protein family
2122222121301920313119257Acetyltransferase (GNAT) family
1111111111111SecE/Sec61-gamma subunits of protein translocation complex
1111111111111C-terminal regulatory domain of Threonine dehydratase
3233222222326AIR synthase related protein, N-terminal domain
5555565566659tRNA synthetase class II core domain (G, H, P, S and T)
11Phage integrase family
2222222222323Tetrapyrrole (Corrin/Porphyrin) Methylases
1111121122215Glycosyl transferase family, a/b domain
2222222222323Class II Aldolase and Adducin N-terminal domain
4444444444545Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
6666666666767Fes/CIP4, and EFC/F-BAR homology domain
2222242266333IQ calmodulin-binding motif
2222222222222Phosphoinositide 3-kinase family, accessory domain (PIK domain)
1111131133117Phospholipase D Active site motif
3333313311327Regulator of G protein signaling domain
4444444444444GTPase-activator protein for Ras-like GTPase
8888868866882RasGEF domain
55