PFAM Domains • Cercophora newfieldiana SMH2532-1 v1.0
Annotations/GenomesApibac1Bombom1Cernew1Clabul1Lashir1Lasmin1Podan2Podcur1Schves1TotalAnnotation Description
PFAMs
10,20410,40611,59810,63511,21911,2628,06710,48710,31194,189
1127 transmembrane receptor (rhodopsin family)
32332311187 transmembrane receptor (Secretin family)
516571647264505554546ATPase family associated with various cellular activities (AAA)
424651465252384841416ABC transporter
44444444436ATP synthase alpha/beta family, nucleotide-binding domain
151515161515141415134Elongation factor Tu GTP binding domain
151618151615151514139Helix-loop-helix DNA-binding domain
55856457449Hsp20/alpha crystallin family
12111314141381110106Hsp70 protein
77888997770KH domain
11SH2 domain
14915151313221211124SH3 domain
10101311111210101198Actin
273343374451851934373Ankyrin repeat
3312232218PAN domain
778710977870ADP-ribosylation factor family
242426242729222727230Eukaryotic aspartyl protease
44444444436Cyclic nucleotide-binding domain
112Beta/Gamma crystallin
1111111119Cytochrome c
11114Double-stranded RNA binding motif
333333183342EF hand
224Fe-4S binding domain
12111121111Fibronectin type III domain
22222222218Globin
441055576551Glutathione S-transferase, C-terminal domain
1111111119Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
11Hemopexin
55555575547Homeodomain
33443344331lactate/malate dehydrogenase, NAD binding domain
11Low-density lipoprotein receptor repeat class B
45544454540Myosin head (motor domain)
92144135115112121102127921,040Cytochrome P450
1531611641541661801021311521,363Protein kinase domain
121515131616161213128Pyridine nucleotide-disulphide oxidoreductase
262835283232262930266Ras family
151517161516151616141Response regulator receiver domain
82553223535RNase H
525554505562615153493RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
22Reverse transcriptase (RNA-dependent DNA polymerase)
44444424535Copper/zinc superoxide dismutase (SODC)
22222222218Iron/manganese superoxide dismutases, alpha-hairpin domain
232436282627202124229Subtilase family
445552424549344236399Sugar (and other) transporter
131219141916131515136Thioredoxin
312129Trypsin
44454444437Tubulin/FtsZ family, GTPase domain
3213413von Willebrand factor type A domain
221731212420532422234Zinc finger, C2H2 type
865456447489Zinc finger, C3HC4 type (RING finger)
23334893338Zinc knuckle
22222232219Protein-tyrosine phosphatase
7211211586102110828873840short chain dehydrogenase
375044415055483835398Zinc-binding dehydrogenase
55565555647Thiolase, N-terminal domain
152615291632231817191Beta-ketoacyl synthase, N-terminal domain
323333533282Fe-2S iron-sulfur cluster binding domain
1113118Papain family cysteine protease
12211111111Enolase, C-terminal TIM barrel domain
1091110998101086Glutamine amidotransferase class-I
11101010101010101091TCP-1/cpn60 chaperonin family
43553353334Glutamine synthetase, catalytic domain
22222222218Triosephosphate isomerase
212121222220162219184E1-E2 ATPase
88888988873Core histone H2A/H2B/H3/H4
912119131581113101Alpha amylase, catalytic domain
22122222217Phorbol esters/diacylglycerol binding domain (C1 domain)
697877108870Bacterial transferase hexapeptide (six repeats)
76565535547tRNA synthetases class I (I, L, M and V)
89788957869Cyclin, N-terminal domain
141519192118142127168Carboxylesterase family
44444444436DNA polymerase family B
65656566651ATP synthase subunit C
44655547848Peroxidase
161226131799915126Beta-lactamase
32234233325C-5 cytosine-specific DNA methylase
242226222122271819201Calcineurin-like phosphoesterase
111415101717101110115Cellulase (glycosyl hydrolase family 5)
98778897770tRNA synthetases class II (D, K and N)
363936363736373635328Mitochondrial carrier protein
11recA bacterial DNA recombination protein
161716161514141514137Aminotransferase class I and II
545546104548Phosphoribosyl transferase domain
10101010101010101090Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1111111119Phosphoglycerate kinase
22222222218Ribosomal protein S4/S9 N-terminal domain
22222222218Ribosomal protein S12/S23
1111111119Chaperonin 10 Kd subunit
121011131210131011102C2 domain
878898178881PH domain
13161612131581712122bZIP transcription factor
151615171713141516138Aldehyde dehydrogenase family
1331441581261571651261331451,287Fungal Zn(2)-Cys(6) binuclear cluster domain
242222242222232222203Cytochrome b5-like Heme/Steroid binding domain
43233333327Oxidoreductase molybdopterin binding domain
161315131314171513129Oxidoreductase NAD-binding domain
362626353029242229257SNF2 family N-terminal domain
22222212116Ribosomal protein S7p/S5e
212324212525202324206Ubiquitin-conjugating enzyme
65755555649Isocitrate/isopropylmalate dehydrogenase
22222222218Ribosomal Proteins L2, RNA binding domain
1111111119Hsp90 protein
22222222218Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1111111119Dihydrofolate reductase
36776547752Chitin recognition protein
33433333227Cysteine-rich secretory protein family
1111111119Ribosomal protein S3, C-terminal domain
32453534332Cupin
22222222218Annexin
12212112214Eukaryotic-type carbonic anhydrase
12111122112Chalcone and stilbene synthases, N-terminal domain
333333333272-oxoacid dehydrogenases acyltransferase (catalytic domain)
44435642537Catalase
1111111119Disintegrin
54786835349UDP-glucoronosyl and UDP-glucosyl transferase
76777777964Aminotransferase class-III
22222222218Ribosomal protein S19
1111111119DNA gyrase B
56556554445Thiamine pyrophosphate enzyme, central domain
43333333328Lyase
22222222218Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
1111111119Adenylate and Guanylate cyclase catalytic domain
1111111119ATP synthase delta (OSCP) subunit
21211211112Orotidine 5'-phosphate decarboxylase / HUMPS family
1111111119Indole-3-glycerol phosphate synthase
11112111110Aromatic amino acid lyase
1111111119Pyruvate kinase, barrel domain
1010131112101111896Kinesin motor domain
302629262528282427243DnaJ domain
141415141414141414127Proteasome subunit
12413214422Major intrinsic protein
1111111119ATP synthase
1111111119Glycosyl hydrolase family 1
11111111193'5'-cyclic nucleotide phosphodiesterase
1111111119Profilin
22222212217Ribosomal protein L22p/L17e
22222222218Ribosomal protein L14p/L23e
8810911109121390Ubiquitin family
55555555545Cofilin/tropomyosin-type actin-binding protein
3333332332614-3-3 protein
22322262223Alkaline phosphatase
55644445441Zinc carboxypeptidase
233434212631222222235Aldo/keto reductase family
9910879178784Myb-like DNA-binding domain
44444444436Forkhead domain
33Glycosyl hydrolases family 32 N-terminal domain
22222212217Ribosomal protein L16p/L10e
22222322219Ribosomal protein S14p/S29e
44444444436FKBP-type peptidyl-prolyl cis-trans isomerase
1111111119Glutathione peroxidase
22
86676897562Flavodoxin
11Protamine P1
1111111119Calreticulin family
181432272215143942223Common central domain of tyrosinase
10101010111189786Aminotransferase class-V
1111111119Ribonucleotide reductase, small chain
444344454650374546400DEAD/DEAH box helicase
787673847977776876688Helicase conserved C-terminal domain
1111111119EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
22222222218Ribosomal protein L23
1111111119Pyridoxal-dependent decarboxylase, C-terminal sheet domain
11112222113Ribosomal protein L5
66696966559Pyridoxal-dependent decarboxylase conserved domain
45343333331Citrate synthase, C-terminal domain
57655555548GHMP kinases N terminal domain
55555555545Biotin carboxylase, N-terminal domain
1111111119Tryptophan synthase alpha chain
11101110101011111195Pyridoxal-phosphate dependent enzyme
191922192323201518178NUDIX domain
76556755551pfkB family carbohydrate kinase
54443222Glycosyl hydrolases family 28
446455129Luciferase-like monooxygenase
22222222218Ribosomal protein L3
22222222218Ribosomal protein L11, RNA binding domain
131213131315131317122Histidine phosphatase superfamily (branch 1)
1111111119Thymidylate synthase
11322122216Lipoxygenase
44444444436ATP synthase alpha/beta chain, C terminal domain
55554555544Calponin homology (CH) domain
33333253328Glutamine amidotransferases class-II
22222222218Ribosomal protein S15
1111111119Thaumatin family
22222222218Fructose-1-6-bisphosphatase, N-terminal domain
1111111119Ribonucleotide reductase, all-alpha domain
22222222218Ribosomal protein S2
22222222218SRF-type transcription factor (DNA-binding and dimerisation domain)
98779788972GATA zinc finger
131512131513231212128Amino acid permease
64856937351Prolyl oligopeptidase family
22222222218Ribosomal protein L30p/L7e
77676677760Histidine phosphatase superfamily (branch 2)
1111111119Respiratory-chain NADH dehydrogenase, 30 Kd subunit
45454444438Aconitase family (aconitate hydratase)
77675686658Glycosyl hydrolase family 10
22122231116Glycosyl hydrolases family 17
22221122216Ribosomal protein S5, N-terminal domain
1111111119Nucleoside diphosphate kinase
11111117Tetraspanin family
22222321218Ribosomal protein S10p/S20e
42343344330Arrestin (or S-antigen), N-terminal domain
1111111119Phosphoglucose isomerase
1111111119Carbohydrate phosphorylase
1111111119SecY translocase
1111111119Respiratory-chain NADH dehydrogenase, 49 Kd subunit
22222222218Ribosomal protein L6
33345334331Polyprenyl synthetase
44444444335Hexokinase
12131313181281516120Dynamin family
22212222217Transcription factor TFIID (or TATA-binding protein, TBP)
44343244533Rieske [2Fe-2S] domain
2222222216Phytochrome region
77777777763Biotin-requiring enzyme
1111111119Phosphofructokinase
22222212217Ribosomal protein S17
21111111110Hydroxymethylglutaryl-coenzyme A reductase
33333333327FGGY family of carbohydrate kinases, N-terminal domain
1111116Sodium:dicarboxylate symporter family
989997910979Enoyl-CoA hydratase/isomerase
22222222218Ribosomal protein S9/S16
22222222218Transcription factor TFIIB repeat
899710998877Cytidine and deoxycytidylate deaminase zinc-binding region
11121111211Molybdopterin oxidoreductase
88676788866Chromo (CHRromatin Organisation MOdifier) domain
44444444436Phosphatidylinositol-specific phospholipase C, Y domain
66655546548Phosphatidylinositol-specific phospholipase C, X domain
67876767761D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
22222222218Malic enzyme, N-terminal domain
11114PEP-utilising enzyme, mobile domain
111111211106-phosphogluconate dehydrogenase, C-terminal domain
131518152021132015150Multicopper oxidase
109998910111085WW domain
21111111110Ribosomal RNA adenine dimethylase
11Yeast PIR protein repeat
1111021081121231131141291191,031WD domain, G-beta repeat
45454545541Heavy-metal-associated domain
43434543535Adenylate kinase
22222222218Phosphoglucomutase/phosphomannomutase, C-terminal domain
22222222218Ribosomal protein S8
22222212217Ribosomal protein S11
44454444639LIM domain
12154316Matrixin
44342433330Regulator of chromosome condensation (RCC1) repeat
22221222116Ribosomal protein S13/S18
22322222219chorismate binding enzyme
2333333332660s Acidic ribosomal protein
43333343430Prenyltransferase and squalene oxidase repeat
34444464538Protein kinase C terminal domain
1111111119Single-strand binding protein family
1111111119S-adenosylmethionine synthetase, N-terminal domain
1098881099980Bromodomain
1099887119879Acyl-CoA dehydrogenase, C-terminal domain
131313131314141313119Ubiquitin carboxyl-terminal hydrolase
1111111119Ribosomal protein L36
12221212215Ribonuclease T2 family
33333333327HSF-type DNA-binding
33333323326SRP54-type protein, GTPase domain
1111111119Urease alpha-subunit, N-terminal domain
698791168872Serine carboxypeptidase
88888888872Phosphatidylinositol 3- and 4-kinase
1111111119Transketolase, thiamine diphosphate binding domain
53897668759Glycosyl hydrolases family 11
55464654342Inositol monophosphatase family
44444444537Glutaredoxin
22222222218Isocitrate lyase family
22223222219Serine hydroxymethyltransferase
23221312117Iron-containing alcohol dehydrogenase
22222222218Ribosomal protein L10
13432123322KOW motif
1111111119Ribosomal protein L34
11111117Ribosomal protein L33
33333233326RF-1 domain
21422122319Sodium:solute symporter family
1111111119Imidazoleglycerol-phosphate dehydratase
1111111119DNA polymerase family A
1111111119IMP dehydrogenase / GMP reductase domain
1111111119Glucose-6-phosphate dehydrogenase, NAD binding domain
66776656554Protein phosphatase 2C
33323223324Nucleotidyl transferase
33535434434Carbonic anhydrase
12111212213Phosphoribulokinase / Uridine kinase family
77767777762Fatty acid desaturase
56866966658MutS domain V
1111111119Delta-aminolevulinic acid dehydratase
35553334233Arginase family
66666666654MCM P-loop domain
33232322121Squalene/phytoene synthase
112Bacterial extracellular solute-binding proteins, family 3
101311111179111194FHA domain
384235424035393332336AMP-binding enzyme
53343563335G-protein alpha subunit
889111110810883HMG (high mobility group) box
11Cytochrome c oxidase subunit III
111114131213121313112His Kinase A (phospho-acceptor) domain
22232322220Armadillo/beta-catenin-like repeat
16161914141834916156Tetratricopeptide repeat
23333324326Ion transport protein
1111111119DNA gyrase/topoisomerase IV, subunit A
556476105452BRCA1 C Terminus (BRCT) domain
710971212991085Glycosyl transferases group 1
12332242221Glycosyl transferase family 2
11211111110SAM domain (Sterile alpha motif)
1111111119linker histone H1 and H5 family
1111111119Ribosomal protein L7/L12 C-terminal domain
31342142222Pectate lyase
31331321219ribonuclease
1111111119Urease, gamma subunit
44433444333CoA-ligase
253419342535222118233Phosphopantetheine attachment site
33333333327Formyl transferase
89989978976Metallopeptidase family M24
457345165453Leucine Rich Repeat
8610111273679106alpha/beta hydrolase fold
33333333327RNA polymerase Rpb2, domain 6
44444444335PB1 domain
22222222218Staphylococcal nuclease homologue
121212121212101212106Rab-GTPase-TBC domain
1111111119Tudor domain
1111111119WH1 domain
44444333433Zinc finger, ZZ type
11212211112HRDC domain
67778888867CBS domain
22222322219Ribosomal protein L13
22222222218Ribosomal protein L4/L1 family
1111111119Clp protease
54455544541S1 RNA binding domain
1111111119HIUase/Transthyretin family
33222232221AhpC/TSA family
44445544438tRNA synthetases class I (W and Y)
1111116UvrD/REP helicase N-terminal domain
1191312987131193Rhodanese-like domain
22222222218Universal stress protein family
282736273127332521255Acetyltransferase (GNAT) family
1111111119SecE/Sec61-gamma subunits of protein translocation complex
1111111119C-terminal regulatory domain of Threonine dehydratase
22222222218AIR synthase related protein, N-terminal domain
77777887765tRNA synthetase class II core domain (G, H, P, S and T)
1111111119SpoU rRNA Methylase family
22222222218Tetrapyrrole (Corrin/Porphyrin) Methylases
1111111119Glycosyl transferase family, a/b domain
112PDZ domain
25322323224Class II Aldolase and Adducin N-terminal domain
44444444436Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
55535545542Fes/CIP4, and EFC/F-BAR homology domain
23122252221IQ calmodulin-binding motif
22222222218Phosphoinositide 3-kinase family, accessory domain (PIK domain)
33322262326Phospholipase D Active site motif
55556315439Regulator of G protein signaling domain
44444444436GTPase-activator protein for Ras-like GTPase
44444444436RasGEF domain
44444444436RasGEF N-terminal motif
1010101010111011890RhoGAP domain
66667656654RhoGEF domain
45746344441SPRY domain
33333333327RNA polymerase Rpb1, domain 2
22222222218Guanylate kinase
34534443434Gelsolin repeat
45443495341UBA/TS-N domain
101311101212141114107PHD-finger
1111111119GGL domain
66666666654HECT-domain (ubiquitin-transferase)
11112111211Helix-hairpin-helix motif
1111111119MSP (Major sperm protein) domain
34343443331Ribonuclease III domain
44444434435Region in Clathrin and VPS
33332233325RanBP1 domain
22211112214PPIC-type PPIASE domain
23212232320Zn-finger in Ran binding protein and others
869987146976Zinc finger C-x8-C-x5-C-x3-H type (and similar)
11B-box zinc finger
32245522429Poly(ADP-ribose) polymerase catalytic domain
1111111119Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
1515198111547818156F-box domain
1111111119Elongation factor 1 gamma, conserved domain
64555554544Calpain family cysteine protease
22132222319Copper fist DNA binding domain
55665756550CRAL/TRIO domain
13102212191361110116BTB/POZ domain
22222321117Ricin-type beta-trefoil lectin domain
1111111119Inhibitor of Apoptosis domain
33534435434Voltage gated chloride channel
33544734235Caspase domain
4971356136669GDSL-like Lipase/Acylhydrolase
1111111119Poly-adenylate binding protein, unique domain
11111117POLO box duplicated region
202629243429182724231ABC transporter transmembrane region
44Integrase core domain
87777897565FAD binding domain
98612108116777Condensation domain
1111111119S-adenosyl-L-homocysteine hydrolase, NAD binding domain
1111111119HAMP domain
22222222218ribosomal L5P family C-terminus
76767656555Insulinase (Peptidase family M16)
33333333327Dehydrogenase E1 component
1111111119Lumazine binding domain
55666656651Elongation factor G C-terminus
54557446444HMGL-like
44444444436DnaJ central domain
112Sulfotransferase domain
44344443131Starch binding domain
34434