PFAM Domains • Dekkera bruxellensis CBS 2499 v1.0
Please note that this organism is for archival use only. Please see the current Dekkera bruxellensis CBS 2499 v2.0 site for the latest data and information.
Annotations/GenomesCanca1Cante1Dekbr1Hanpo2Lipst1_1Nadfu1Picme1Picst3Sacce1Spapa3Wican1TotalAnnotation Description
PFAMs
4,4745,0504,7905,0066,3675,3244,8834,5715,5355,2595,80757,066
3034323235373228333333359ATPase family associated with various cellular activities (AAA)
2524232256263031313136335ABC transporter
4444444444444ATP synthase alpha/beta family, nucleotide-binding domain
112EGF-like domain
1213141414141414161414153Elongation factor Tu GTP binding domain
78989897781090Helix-loop-helix DNA-binding domain
2124412218Hsp20/alpha crystallin family
799971091214910105Hsp70 protein
5778998888885KH domain
1111111119SH2 domain
1619171721211822221921213SH3 domain
89111010119891011106Actin
1013141216151414181616158Ankyrin repeat
7666775777671ADP-ribosylation factor family
484586797141284Eukaryotic aspartyl protease
4343444433339Cyclic nucleotide-binding domain
11Cytochrome b/b6/petB
1121121121114Cytochrome c
1112323123524Double-stranded RNA binding motif
149111415151113111111135EF hand
1121111111114Fe-4S binding domain
1121128Fibronectin type III domain
131222228225Globin
2686748266863Glutathione S-transferase, C-terminal domain
1221121431220Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
2335664385449Homeodomain
11Laminin EGF domain
2333223333330lactate/malate dehydrogenase, NAD binding domain
323553353133Myosin head (motor domain)
5114521451039582Cytochrome P450
798995978698969511493971,039Protein kinase domain
575101097895984Pyridine nucleotide-disulphide oxidoreductase
1920182223241923242021233Ras family
4635795648966Response regulator receiver domain
12211111111RNase H
4040515262584547484659548RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
11Retroviral aspartyl protease
22Reverse transcriptase (RNA-dependent DNA polymerase)
1322112313221Copper/zinc superoxide dismutase (SODC)
1111111212214Iron/manganese superoxide dismutases, alpha-hairpin domain
64445544412557Subtilase family
10393032103141460342539400Sugar (and other) transporter
789889791081093Thioredoxin
11211129Trypsin
5333543343339Tubulin/FtsZ family, GTPase domain
112von Willebrand factor type A domain
3038303441413349383339406Zinc finger, C2H2 type
3028292634313024223337324Zinc finger, C3HC4 type (RING finger)
3242933567448Zinc knuckle
2422222234328Protein-tyrosine phosphatase
2042142580201731133340335short chain dehydrogenase
2317151940151624171829233Zinc-binding dehydrogenase
3222532424534Thiolase, N-terminal domain
2222521222224Beta-ketoacyl synthase, N-terminal domain
33333333233322Fe-2S iron-sulfur cluster binding domain
1111111151216Enolase, C-terminal TIM barrel domain
22Cytochrome C and Quinol oxidase polypeptide I
11Cytochrome C oxidase subunit II, periplasmic domain
7777888798783Glutamine amidotransferase class-I
9109109101010101011108TCP-1/cpn60 chaperonin family
2111121111113Glutamine synthetase, catalytic domain
1111311111113Triosephosphate isomerase
810981711911121013118E1-E2 ATPase
5111097131011101110107Core histone H2A/H2B/H3/H4
13621941683457Alpha amylase, catalytic domain
2111212111114Phorbol esters/diacylglycerol binding domain (C1 domain)
4546665548760Bacterial transferase hexapeptide (six repeats)
4334343733340tRNA synthetases class I (I, L, M and V)
610810710711131211105Cyclin, N-terminal domain
111732419Carboxylesterase family
4444444444444DNA polymerase family B
3333433333334ATP synthase subunit C
1122222212118Peroxidase
312118Beta-lactamase
11NADH dehydrogenase
1519182129182018211821218Calcineurin-like phosphoesterase
1511331443329Cellulase (glycosyl hydrolase family 5)
6666666666666tRNA synthetases class II (D, K and N)
3333313135383034343335367Mitochondrial carrier protein
1115121111111110111314130Aminotransferase class I and II
688881088118891Phosphoribosyl transferase domain
4610891268881190Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1111111111111Phosphoglycerate kinase
1222232232223Ribosomal protein S4/S9 N-terminal domain
2222232232224Ribosomal protein S12/S23
12216Bacterial regulatory helix-turn-helix proteins, AraC family
111212111112Chaperonin 10 Kd subunit
61061189591191195C2 domain
1413111314151215241218161PH domain
3626786585460bZIP transcription factor
1010101111910109915114Aldehyde dehydrogenase family
43865773125398285535993795Fungal Zn(2)-Cys(6) binuclear cluster domain
121615141913131471313149Cytochrome b5-like Heme/Steroid binding domain
1214Oxidoreductase molybdopterin binding domain
7689877787983Oxidoreductase NAD-binding domain
1718191619181918171719197SNF2 family N-terminal domain
2232232222224Ribosomal protein S7p/S5e
1513141421151413141316162Ubiquitin-conjugating enzyme
5666666676666Isocitrate/isopropylmalate dehydrogenase
2322233333228Ribosomal Proteins L2, RNA binding domain
1111121121113Hsp90 protein
2222222222222Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1111111111111Dihydrofolate reductase
1214Chitin recognition protein
442232339335Cysteine-rich secretory protein family
1111111111111Ribosomal protein S3, C-terminal domain
11Cupin
112Annexin
112Trypsin and protease inhibitor
32222322222242-oxoacid dehydrogenases acyltransferase (catalytic domain)
2211621121221Catalase
112Disintegrin
112UDP-glucoronosyl and UDP-glucosyl transferase
3758489745868Aminotransferase class-III
2221232222222Ribosomal protein S19
1111111111111DNA gyrase B
5345544373447Thiamine pyrophosphate enzyme, central domain
3333333434335Lyase
2222222232223Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
2111121111113Adenylate and Guanylate cyclase catalytic domain
1111121111112ATP synthase delta (OSCP) subunit
1111111111111Orotidine 5'-phosphate decarboxylase / HUMPS family
1111111111111Indole-3-glycerol phosphate synthase
11Neurohypophysial hormones, N-terminal Domain
1111121121113Pyruvate kinase, barrel domain
86486105666873Kinesin motor domain
2121212324252224212325250DnaJ domain
1414141314141414141414153Proteasome subunit
1111211141216Major intrinsic protein
1111111111111ATP synthase
11111111111113'5'-cyclic nucleotide phosphodiesterase
1111111119Profilin
1212121121115Ribosomal protein L22p/L17e
1222222232222Ribosomal protein L14p/L23e
875711117697886Ubiquitin family
2444424334539Cofilin/tropomyosin-type actin-binding protein
211122112111514-3-3 protein
2222311211320Alkaline phosphatase
111111111110Zinc carboxypeptidase
61713164181717161824193Aldo/keto reductase family
1110141413141612151214145Myb-like DNA-binding domain
3332333344435Forkhead domain
181212Glycosyl hydrolases family 32 N-terminal domain
1111111119Ribosomal protein L16p/L10e
2222232132223Ribosomal protein S14p/S29e
3223333343332FKBP-type peptidyl-prolyl cis-trans isomerase
1211121232218Glutathione peroxidase
2111211121215
68771078876781Flavodoxin
1111121111112Calreticulin family
6545645334651Aminotransferase class-V
1111111121112Ribonucleotide reductase, small chain
3027313136363237563134381DEAD/DEAH box helicase
5349555970595956795959657Helicase conserved C-terminal domain
1111111111111EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
2222222222222Ribosomal protein L23
1111111111111Pyridoxal-dependent decarboxylase, C-terminal sheet domain
1121122131217Ribosomal protein L5
3333633323335Pyridoxal-dependent decarboxylase conserved domain
2111331131219Citrate synthase, C-terminal domain
5543754465553GHMP kinases N terminal domain
7665655575663Biotin carboxylase, N-terminal domain
1111111111111Tryptophan synthase alpha chain
78568878781183Pyridoxal-phosphate dependent enzyme
98769107878786NUDIX domain
4434343244338pfkB family carbohydrate kinase
11Glycosyl hydrolases family 28
11Luciferase-like monooxygenase
2222222222222Ribosomal protein L3
2222232232224Ribosomal protein L11, RNA binding domain
101512121113128121512132Histidine phosphatase superfamily (branch 1)
1111111111111Thymidylate synthase
4444444444444ATP synthase alpha/beta chain, C terminal domain
4544454544346Calponin homology (CH) domain
5554664475455Glutamine amidotransferases class-II
2222222222222Ribosomal protein S15
1111111111111Fructose-1-6-bisphosphatase, N-terminal domain
1222112222219Ribonucleotide reductase, all-alpha domain
2222222232223Ribosomal protein S2
2322222241224SRF-type transcription factor (DNA-binding and dimerisation domain)
5888710791081090GATA zinc finger
143024299233036242943291Amino acid permease
2222222222323Prolyl oligopeptidase family
2313143243228Ribosomal protein L30p/L7e
3344983365654Histidine phosphatase superfamily (branch 2)
1111111119Respiratory-chain NADH dehydrogenase, 30 Kd subunit
4444444544445Aconitase family (aconitate hydratase)
11Glycosyl hydrolase family 10
2343335234335Glycosyl hydrolases family 17
1222222222221Ribosomal protein S5, N-terminal domain
1111111111111Nucleoside diphosphate kinase
1122122121217Ribosomal protein S10p/S20e
5312631232432Arrestin (or S-antigen), N-terminal domain
1111111111111Phosphoglucose isomerase
111111111110Carbohydrate phosphorylase
1221122222219SecY translocase
1111111119Respiratory-chain NADH dehydrogenase, 49 Kd subunit
2243232232328Ribosomal protein L6
3333333333333Polyprenyl synthetase
3343244353337Hexokinase
3333343333334Dynamin family
1111111111111Transcription factor TFIID (or TATA-binding protein, TBP)
1224212211321Rieske [2Fe-2S] domain
22Proton-conducting membrane transporter
9767776686776Biotin-requiring enzyme
1222132222221Phosphofructokinase
2222232232224Ribosomal protein S17
1111111121112Hydroxymethylglutaryl-coenzyme A reductase
3334332332433FGGY family of carbohydrate kinases, N-terminal domain
7322442334438Enoyl-CoA hydratase/isomerase
2222232232224Ribosomal protein S9/S16
2222322233225Transcription factor TFIIB repeat
6666467666564Cytidine and deoxycytidylate deaminase zinc-binding region
1111111119Molybdopterin oxidoreductase
1222422122222Chromo (CHRromatin Organisation MOdifier) domain
1111111111111Phosphatidylinositol-specific phospholipase C, Y domain
1121111211113Phosphatidylinositol-specific phospholipase C, X domain
5645844446656D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
1111111111111Malic enzyme, N-terminal domain
11111111211126-phosphogluconate dehydrogenase, C-terminal domain
1322923232534Multicopper oxidase
35468105756665WW domain
2211221222219Ribosomal RNA adenine dimethylase
12442101529Yeast PIR protein repeat
848586861001048484888993983WD domain, G-beta repeat
3443533534441Heavy-metal-associated domain
3334333333334Adenylate kinase
2223222232325Phosphoglucomutase/phosphomannomutase, C-terminal domain
2333123222225Ribosomal protein S8
1111121121113Ribosomal protein S11
3223332342229LIM domain
2111121111113Regulator of chromosome condensation (RCC1) repeat
2222142232224Ribosomal protein S13/S18
2222222222222chorismate binding enzyme
354535555555060s Acidic ribosomal protein
4444444444343Prenyltransferase and squalene oxidase repeat
5766686486567Protein kinase C terminal domain
1111111111111Single-strand binding protein family
1111121121113S-adenosylmethionine synthetase, N-terminal domain
8989711109108998Bromodomain
7216532228Acyl-CoA dehydrogenase, C-terminal domain
1214151317131416161515160Ubiquitin carboxyl-terminal hydrolase
111111118Ribosomal protein L36
1211111211113Ribonuclease T2 family
3444344452542HSF-type DNA-binding
2222222222222SRP54-type protein, GTPase domain
2523233433333Serine carboxypeptidase
8788877898886Phosphatidylinositol 3- and 4-kinase
1313321221221Transketolase, thiamine diphosphate binding domain
2111211131317Inositol monophosphatase family
2455475477454Glutaredoxin
2213221121219Isocitrate lyase family
2222122222221Serine hydroxymethyltransferase
111115Iron-containing alcohol dehydrogenase
2222232222223Ribosomal protein L10
4233473674447KOW motif
1111111119Ribosomal protein L34
11Negative factor, (F-Protein) or Nef
223222323425RF-1 domain
2635214613740Sodium:solute symporter family
112111111111Imidazoleglycerol-phosphate dehydratase
1111111111111DNA polymerase family A
1111111151115IMP dehydrogenase / GMP reductase domain
1111121111112Glucose-6-phosphate dehydrogenase, NAD binding domain
11ROK family
6666586676668Protein phosphatase 2C
3223333223127Nucleotidyl transferase
1211211212216Carbonic anhydrase
1211121222217Phosphoribulokinase / Uridine kinase family
4656655616656Fatty acid desaturase
4454645464652MutS domain V
1111111111111Delta-aminolevulinic acid dehydratase
5355114313334Arginase family
6676666666768MCM P-loop domain
1111211111112Squalene/phytoene synthase
98779876148891FHA domain
169671211610101012109AMP-binding enzyme
3212222222222G-protein alpha subunit
5556665574458HMG (high mobility group) box
2212573212532His Kinase A (phospho-acceptor) domain
2222332222224Armadillo/beta-catenin-like repeat
1310121620221514211716176Tetratricopeptide repeat
3112122322221Ion transport protein
1111111111111DNA gyrase/topoisomerase IV, subunit A
1189999991089100BRCA1 C Terminus (BRCT) domain
4444644444446Glycosyl transferases group 1
2222322222223Glycosyl transferase family 2
111111118SAM domain (Sterile alpha motif)
111111111110linker histone H1 and H5 family
1111111119Ribosomal protein L7/L12 C-terminal domain
3222332222225CoA-ligase
3333323323331Phosphopantetheine attachment site
2222222222222Formyl transferase
9858887668881Metallopeptidase family M24
1116101112161029113111168Leucine Rich Repeat
1318161820111419152023187alpha/beta hydrolase fold
3333343333334RNA polymerase Rpb2, domain 6
3222221211321PB1 domain
2222222212221Staphylococcal nuclease homologue
766710108887986Rab-GTPase-TBC domain
1111111119Tudor domain
111111111110WH1 domain
2212412222222Zinc finger, ZZ type
1111111121112HRDC domain
986791177108991CBS domain
1222222232222Ribosomal protein L13
2112231131219Ribosomal protein L4/L1 family
1113Clp protease
4233443244336S1 RNA binding domain
111111111110HIUase/Transthyretin family
4444554644448AhpC/TSA family
4444444444444tRNA synthetases class I (W and Y)
123121232320UvrD/REP helicase N-terminal domain
5355453494552Rhodanese-like domain
23122221318Universal stress protein family
111391025181113131611150Acetyltransferase (GNAT) family
1111111119SecE/Sec61-gamma subunits of protein translocation complex
1111112111112C-terminal regulatory domain of Threonine dehydratase
4222222222224AIR synthase related protein, N-terminal domain
8888888898990tRNA synthetase class II core domain (G, H, P, S and T)
1211122222218SpoU rRNA Methylase family
2222222222323Tetrapyrrole (Corrin/Porphyrin) Methylases
1111111111111Glycosyl transferase family, a/b domain
11211121111PDZ domain
1223137212226Class II Aldolase and Adducin N-terminal domain
2422343354436Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
3332353444438Fes/CIP4, and EFC/F-BAR homology domain
213332334226IQ calmodulin-binding motif
2222222222222Phosphoinositide 3-kinase family, accessory domain (PIK domain)
2222222222121Phospholipase D Active site motif
1111116Regulator of G protein signaling domain
3332352343334GTPase-activator protein for Ras-like GTPase
2444444444442RasGEF domain
2444444144439RasGEF N-terminal motif
597781178118990RhoGAP domain
4322522233432RhoGEF domain
4334353333438SPRY domain
3233333333332RNA polymerase Rpb1, domain 2
44Flocculin repeat
111111111110Guanylate kinase
1234333343534Gelsolin repeat
5656666497868UBA/TS-N domain
1112131014141014131315139PHD-finger
11111117GGL domain
5555654555555HECT-domain (ubiquitin-transferase)
111