PFAM Domains • Setosphaeria turcica NY001 v2.0
Annotations/GenomesCocca1CocheC4_1Coclu2Cocmi1Cocsa1Cocvi1Settu1Settu3Settur1Settur3TotalAnnotation Description
PFAMs
8,9079,0348,8208,7108,8298,9988,66110,6568,65710,63991,911
1111111187 transmembrane receptor (rhodopsin family)
40414039404239393838396ATPase family associated with various cellular activities (AAA)
43424238413939403840402ABC transporter
444444444440ATP synthase alpha/beta family, nucleotide-binding domain
14141414141414161417145Elongation factor Tu GTP binding domain
13131415161514141414142Helix-loop-helix DNA-binding domain
333333333330Hsp20/alpha crystallin family
77777771071076Hsp70 protein
888888878778KH domain
112Ribulose bisphosphate carboxylase large chain, catalytic domain
111111118SH2 domain
23232323232323132313210SH3 domain
10101010101010101010100Actin
72878670757953155421612Ankyrin repeat
777858324253PAN domain
777777777770ADP-ribosylation factor family
17191314151612171317153Eukaryotic aspartyl protease
444444444440Cyclic nucleotide-binding domain
111115Cytochrome b(C-terminal)/b6/petD
11114Cytochrome b/b6/petB
111111111110Cytochrome c
111111212112Double-stranded RNA binding motif
181817201818172173148EF hand
1121111194Fe-4S binding domain
342333212124Fibronectin type III domain
111111111110Globin
88881010878782Glutathione S-transferase, C-terminal domain
111111111110Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
989888858576Homeodomain
444444444440lactate/malate dehydrogenase, NAD binding domain
544444444441Myosin head (motor domain)
1431491061241271381331341321321,318Cytochrome P450
1081101031041101081061261071241,106Protein kinase domain
16171614131615131513148Pyridine nucleotide-disulphide oxidoreductase
25252523242525262526249Ras family
25252425252525252525249Response regulator receiver domain
79543331RNase H
58586058575958535952572RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
145Reverse transcriptase (RNA-dependent DNA polymerase)
222222232322Copper/zinc superoxide dismutase (SODC)
222222222220Iron/manganese superoxide dismutases, alpha-hairpin domain
13111112121412161316130Subtilase family
69707166686964706470681Sugar (and other) transporter
11121111111112121212115Thioredoxin
344333313128Trypsin
444454444441Tubulin/FtsZ family, GTPase domain
334444424234von Willebrand factor type A domain
61645860596561206822538Zinc finger, C2H2 type
545451565154514565436Zinc finger, C3HC4 type (RING finger)
42211631233450Zinc knuckle
222222222220Protein-tyrosine phosphatase
1321361401251271271311261321281,304short chain dehydrogenase
71695966626568596759645Zinc-binding dehydrogenase
676666666661Thiolase, N-terminal domain
29271822212531323233270Beta-ketoacyl synthase, N-terminal domain
6667666464572Fe-2S iron-sulfur cluster binding domain
11Papain family cysteine protease
111111111110Enolase, C-terminal TIM barrel domain
11226Cytochrome C and Quinol oxidase polypeptide I
11Cytochrome C oxidase subunit II, periplasmic domain
88888891091086Glutamine amidotransferase class-I
10101010101010101010100TCP-1/cpn60 chaperonin family
111115ATP synthase A chain
333333333330Glutamine synthetase, catalytic domain
222222222220Triosephosphate isomerase
16161717181917211721179E1-E2 ATPase
898868999983Core histone H2A/H2B/H3/H4
111115Copper binding proteins, plastocyanin/azurin family
667766666662Alpha amylase, catalytic domain
112121122215Phorbol esters/diacylglycerol binding domain (C1 domain)
987789988780Bacterial transferase hexapeptide (six repeats)
334333454537tRNA synthetases class I (I, L, M and V)
79778791091083Cyclin, N-terminal domain
25282525282523212321244Carboxylesterase family
44444424DNA polymerase family B
444444444440ATP synthase subunit C
788777787874Peroxidase
876788555564Beta-lactamase
223222333325C-5 cytosine-specific DNA methylase
2114NADH dehydrogenase
25262526262627232623253Calcineurin-like phosphoesterase
9988101071171291Cellulase (glycosyl hydrolase family 5)
778777777771tRNA synthetases class II (D, K and N)
45414042414440394139412Mitochondrial carrier protein
11recA bacterial DNA recombination protein
16172115171616181618170Aminotransferase class I and II
9888991069581Phosphoribosyl transferase domain
12121212111212121212119Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
111111111110Phosphoglycerate kinase
222222222220Ribosomal protein S4/S9 N-terminal domain
222222112218Ribosomal protein S12/S23
11114Bacterial regulatory helix-turn-helix proteins, AraC family
111111111110Chaperonin 10 Kd subunit
121213121212119129114C2 domain
19202119191819111911176PH domain
999991181381398bZIP transcription factor
25272526242719221922236Aldehyde dehydrogenase family
1721851791791821831601611801681,749Fungal Zn(2)-Cys(6) binuclear cluster domain
24242426242426262626250Cytochrome b5-like Heme/Steroid binding domain
443444333335Oxidoreductase molybdopterin binding domain
17181518181616151615164Oxidoreductase NAD-binding domain
25252527242624252426251SNF2 family N-terminal domain
222222222220Ribosomal protein S7p/S5e
21222522222225252526235Ubiquitin-conjugating enzyme
776778666666Isocitrate/isopropylmalate dehydrogenase
222222222220Ribosomal Proteins L2, RNA binding domain
111111111110Hsp90 protein
222222222220Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
111111111110Dihydrofolate reductase
121112111112545487Chitin recognition protein
112311233320Cysteine-rich secretory protein family
111111111110Ribosomal protein S3, C-terminal domain
444645666651Cupin
222222222220Annexin
111111111110Eukaryotic-type carbonic anhydrase
111111111110Chalcone and stilbene synthases, N-terminal domain
4333333333312-oxoacid dehydrogenases acyltransferase (catalytic domain)
444444444440Catalase
111111111110Disintegrin
15511UDP-glucoronosyl and UDP-glucosyl transferase
12109111212888898Aminotransferase class-III
222222222220Ribosomal protein S19
111111111110DNA gyrase B
766566444452Thiamine pyrophosphate enzyme, central domain
444444444440Lyase
222222222220Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
111111333318Sodium:neurotransmitter symporter family
111111111110Adenylate and Guanylate cyclase catalytic domain
111111111110ATP synthase delta (OSCP) subunit
111111111110Orotidine 5'-phosphate decarboxylase / HUMPS family
111111111110Indole-3-glycerol phosphate synthase
1113Aromatic amino acid lyase
111111111110Pyruvate kinase, barrel domain
101110109129109999Kinesin motor domain
29293029302931313130299DnaJ domain
14141414141414141414140Proteasome subunit
678656888870Major intrinsic protein
111111111110ATP synthase
333333333330Glycosyl hydrolase family 1
1111111111103'5'-cyclic nucleotide phosphodiesterase
111111111110Profilin
111111121212Ribosomal protein L22p/L17e
222222222220Ribosomal protein L14p/L23e
910121111101191110104Ubiquitin family
555555555550Cofilin/tropomyosin-type actin-binding protein
22222223232214-3-3 protein
666666636354Alkaline phosphatase
888888888880Zinc carboxypeptidase
26252725292727282727268Aldo/keto reductase family
1515131413151610158134Myb-like DNA-binding domain
444444454542Forkhead domain
334353333333Glycosyl hydrolases family 32 N-terminal domain
111111121212Ribosomal protein L16p/L10e
333333333330Ribosomal protein S14p/S29e
555555555550FKBP-type peptidyl-prolyl cis-trans isomerase
111111111110Glutathione peroxidase
111111118
898897878779Flavodoxin
111111111110Calreticulin family
1212121191410121112115Common central domain of tyrosinase
881188891091089Aminotransferase class-V
111111111110Ribonucleotide reductase, small chain
41393939404042484147416DEAD/DEAH box helicase
75767574767373727374741Helicase conserved C-terminal domain
111111111110EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
222222222220Ribosomal protein L23
111111111110Pyridoxal-dependent decarboxylase, C-terminal sheet domain
222222212118Ribosomal protein L5
667676666662Pyridoxal-dependent decarboxylase conserved domain
333323232327Citrate synthase, C-terminal domain
555555555550GHMP kinases N terminal domain
777777777770Biotin carboxylase, N-terminal domain
111111111110Tryptophan synthase alpha chain
10111010101011121111106Pyridoxal-phosphate dependent enzyme
16151615151515151616154NUDIX domain
655656555553pfkB family carbohydrate kinase
433444666646Glycosyl hydrolases family 28
111111121212Luciferase-like monooxygenase
222222222220Ribosomal protein L3
222222222220Ribosomal protein L11, RNA binding domain
13121313141312121212126Histidine phosphatase superfamily (branch 1)
111111111110Thymidylate synthase
1333313Lipoxygenase
444444444440ATP synthase alpha/beta chain, C terminal domain
555555554448Calponin homology (CH) domain
665655525247Glutamine amidotransferases class-II
222222222220Ribosomal protein S15
111111111110Thaumatin family
221222222219Fructose-1-6-bisphosphatase, N-terminal domain
111111111110Ribonucleotide reductase, all-alpha domain
222222222220Ribosomal protein S2
222222222220SRF-type transcription factor (DNA-binding and dimerisation domain)
676676556660GATA zinc finger
40394541374032133113331Amino acid permease
576655696964Prolyl oligopeptidase family
333333333330Ribosomal protein L30p/L7e
12121212121212121212120Histidine phosphatase superfamily (branch 2)
111111111110Respiratory-chain NADH dehydrogenase, 30 Kd subunit
444444444440Aconitase family (aconitate hydratase)
656556555553Glycosyl hydrolase family 10
222322333325Glycosyl hydrolases family 17
222222222220Ribosomal protein S5, N-terminal domain
111111111110Nucleoside diphosphate kinase
111111118Tetraspanin family
112111121213Ribosomal protein S10p/S20e
544445674649Arrestin (or S-antigen), N-terminal domain
111111111110Phosphoglucose isomerase
111111111110Carbohydrate phosphorylase
111111111110SecY translocase
111111111110Respiratory-chain NADH dehydrogenase, 49 Kd subunit
222222222220Ribosomal protein L6
884878333355Polyprenyl synthetase
444444444440Hexokinase
775444111591379Dynamin family
111111111110Transcription factor TFIID (or TATA-binding protein, TBP)
555656545450Rieske [2Fe-2S] domain
1113Phytochrome region
4434318Proton-conducting membrane transporter
10108101010999994Biotin-requiring enzyme
111111111110Phosphofructokinase
222222222220Ribosomal protein S17
111111222214Hydroxymethylglutaryl-coenzyme A reductase
333333333330FGGY family of carbohydrate kinases, N-terminal domain
111111111110Sodium:dicarboxylate symporter family
11121211111210101010109Enoyl-CoA hydratase/isomerase
222222222220Ribosomal protein S9/S16
222222222220Transcription factor TFIIB repeat
667666666661Cytidine and deoxycytidylate deaminase zinc-binding region
111111111110Molybdopterin oxidoreductase
5575761068665Chromo (CHRromatin Organisation MOdifier) domain
333334333331Phosphatidylinositol-specific phospholipase C, Y domain
334334343434Phosphatidylinositol-specific phospholipase C, X domain
9987791011111293D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
222222222220Malic enzyme, N-terminal domain
2222222222206-phosphogluconate dehydrogenase, C-terminal domain
101111111010888895Multicopper oxidase
11111111101111111110108WW domain
111111121212Ribosomal RNA adenine dimethylase
222222212118Yeast PIR protein repeat
1161171171141321221171081181041,165WD domain, G-beta repeat
546566444347Heavy-metal-associated domain
443333333332Adenylate kinase
222232232323Phosphoglucomutase/phosphomannomutase, C-terminal domain
222222121218Ribosomal protein S8
111111121212Ribosomal protein S11
444444444440LIM domain
2131119Matrixin
212212232320Regulator of chromosome condensation (RCC1) repeat
222222222220Ribosomal protein S13/S18
1113NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
11REV protein (anti-repression trans-activator protein)
222222222220chorismate binding enzyme
44444443433860s Acidic ribosomal protein
544555434342Prenyltransferase and squalene oxidase repeat
566555545349Protein kinase C terminal domain
111111111110Single-strand binding protein family
111111111110S-adenosylmethionine synthetase, N-terminal domain
777777888874Bromodomain
16151415151714131413146Acyl-CoA dehydrogenase, C-terminal domain
15141415151514141415145Ubiquitin carboxyl-terminal hydrolase
111111111110Ribosomal protein L36
222222222220Ribonuclease T2 family
333333333330HSF-type DNA-binding
222222222220SRP54-type protein, GTPase domain
111111111110Urease alpha-subunit, N-terminal domain
11121111111111111111111Serine carboxypeptidase
888888888880Phosphatidylinositol 3- and 4-kinase
222222222220Transketolase, thiamine diphosphate binding domain
555555565652Glycosyl hydrolases family 11
555555555550Inositol monophosphatase family
444444444339Glutaredoxin
333333323228Isocitrate lyase family
222222222220Serine hydroxymethyltransferase
564445444444Iron-containing alcohol dehydrogenase
222222222220Ribosomal protein L10
433334343434KOW motif
111111111110Ribosomal protein L34
1111116Negative factor, (F-Protein) or Nef
112Ribosomal protein L33
222222232322RF-1 domain
234323323227Sodium:solute symporter family
111111111110Imidazoleglycerol-phosphate dehydratase
1111116DNA polymerase family A
111111111110IMP dehydrogenase / GMP reductase domain
111111111110Glucose-6-phosphate dehydrogenase, NAD binding domain
777777787771Protein phosphatase 2C
333333333330Nucleotidyl transferase
223222232323Carbonic anhydrase
111111131314Phosphoribulokinase / Uridine kinase family
778777787873Fatty acid desaturase
666666666660MutS domain V
111111111110Delta-aminolevulinic acid dehydratase
554565444446Arginase family
666666666660MCM P-loop domain
222222232322Squalene/phytoene synthase
879777888877FHA domain
11NADH-ubiquinone/plastoquinone oxidoreductase chain 6
57555041605654545353533AMP-binding enzyme
444444444440G-protein alpha subunit
788899787879HMG (high mobility group) box
1113NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
1113Cytochrome c oxidase subunit III
20202020222121212121207His Kinase A (phospho-acceptor) domain
333333323228Armadillo/beta-catenin-like repeat
28283727313027122812260Tetratricopeptide repeat
223222232323Ion transport protein
111111111110DNA gyrase/topoisomerase IV, subunit A
10111191110118118100BRCA1 C Terminus (BRCT) domain
667766656560Glycosyl transferases group 1
654676323244Glycosyl transferase family 2
332335222227SAM domain (Sterile alpha motif)
111111111110linker histone H1 and H5 family
111111111110Ribosomal protein L7/L12 C-terminal domain
556555444447Pectate lyase
121212131216ribonuclease
111111111110Urease, gamma subunit
454444444441CoA-ligase
27292621312831423244311Phosphopantetheine attachment site
333333333330Formyl transferase
99999991091092Metallopeptidase family M24
161815161717151151131Leucine Rich Repeat
393953424142387377345alpha/beta hydrolase fold
333333333330RNA polymerase Rpb2, domain 6
334333444435PB1 domain
222222222220Staphylococcal nuclease homologue
12121012121212121212118Rab-GTPase-TBC domain
111111111110Tudor domain
111111221112WH1 domain
334343343434Zinc finger, ZZ type
131121333321HRDC domain
888878878777CBS domain
222222222220Ribosomal protein L13
222222222220Ribosomal protein L4/L1 family
111111111110Clp protease
333343343433S1 RNA binding domain
111111111110HIUase/Transthyretin family
455554444444AhpC/TSA family
444444444440tRNA synthetases class I (W and Y)
111111212112UvrD/REP helicase N-terminal domain
44544441041053Rhodanese-like domain
221222222219Universal stress protein family
42424541374335273527374Acetyltransferase (GNAT) family
111111111110SecE/Sec61-gamma subunits of protein translocation complex
111111111110C-terminal regulatory domain of Threonine dehydratase
222222222220AIR synthase related protein, N-terminal domain
999999878784tRNA synthetase class II core domain (G, H, P, S and T)
222222222220SpoU rRNA Methylase family
11Phage integrase family
222222222220Tetrapyrrole (Corrin/Porphyrin) Methylases
111111111110Glycosyl transferase family, a/b domain
211222313118PDZ domain
789877777774Class II Aldolase and Adducin N-terminal domain
444444444440Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
555555555449Fes/CIP4, and EFC/F-BAR homology domain
666556526249IQ calmodulin-binding motif
222222222220Phosphoinositide 3-kinase family, accessory domain (PIK domain)
555545535345Phospholipase D Active site motif
111111141416Regulator of G protein signaling domain
333333333330GTPase-activator protein for Ras-like GTPase
444444444440RasGEF domain
444444444440RasGEF N-terminal motif
887888888879RhoGAP domain
666666676762RhoGEF domain
222222222220SPRY domain
333333333330RNA polymerase Rpb1, domain 2
111111111110Guanylate kinase
334333334332Gelsolin repeat
7810888959577UBA/TS-N domain
18161718181816121713163PHD-finger
111111111110GGL domain
555555555550HECT-domain (ubiquitin-transferase)
122