PFAM Domains • Amanita thiersii Skay4041 v1.0
Annotations/GenomesAgabi_varbur_1Amath1Copci1Lacbi2PleosPC15_2Schco2TotalAnnotation Description
PFAMs
7,0187,0667,6788,6567,9728,49246,882
117 transmembrane receptor (rhodopsin family)
393943394743250ATPase family associated with various cellular activities (AAA)
363146493946247ABC transporter
44444424ATP synthase alpha/beta family, nucleotide-binding domain
11EGF-like domain
16141516151591Elongation factor Tu GTP binding domain
11101020111274Helix-loop-helix DNA-binding domain
487107945Hsp20/alpha crystallin family
7781511755Hsp70 protein
98888950KH domain
111115SH2 domain
282431402826177SH3 domain
11111215111171Actin
172293952245294Ankyrin repeat
67898745ADP-ribosylation factor family
151513242429120Eukaryotic aspartyl protease
33333318Cyclic nucleotide-binding domain
112Cytochrome b(C-terminal)/b6/petD
123Cytochrome b/b6/petB
1111116Cytochrome c
5861161248Double-stranded RNA binding motif
191819181920113EF hand
11221184Fe-4S binding domain
1111116Fibronectin type III domain
11Globin
3016141381495Glutathione S-transferase, C-terminal domain
21352114Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
11Hemopexin
791010101157Homeodomain
122117Laminin EGF domain
22223213lactate/malate dehydrogenase, NAD binding domain
44575530Myosin head (motor domain)
1117413486143114662Cytochrome P450
130132136217155161931Protein kinase domain
13151714201190Pyridine nucleotide-disulphide oxidoreductase
252332532626185Ras family
6887101251Response regulator receiver domain
732811940RNase H
576964716770398RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
41712Reverse transcriptase (RNA-dependent DNA polymerase)
11114Copper/zinc superoxide dismutase (SODC)
12232313Iron/manganese superoxide dismutases, alpha-hairpin domain
7171259353Subtilase family
292320212741161Sugar (and other) transporter
1210910151369Thioredoxin
55566532Tubulin/FtsZ family, GTPase domain
42364322von Willebrand factor type A domain
394360635798360Zinc finger, C2H2 type
475248665966338Zinc finger, C3HC4 type (RING finger)
6423521344424422Zinc knuckle
32222213Protein-tyrosine phosphatase
5444494980110386short chain dehydrogenase
273129314147206Zinc-binding dehydrogenase
64444426Thiolase, N-terminal domain
34252319Beta-ketoacyl synthase, N-terminal domain
333733222Fe-2S iron-sulfur cluster binding domain
33Papain family cysteine protease
1111116Enolase, C-terminal TIM barrel domain
325Cytochrome C and Quinol oxidase polypeptide I
11Cytochrome C oxidase subunit II, periplasmic domain
998137854Glutamine amidotransferase class-I
10121013101065TCP-1/cpn60 chaperonin family
112ATP synthase A chain
45473326Glutamine synthetase, catalytic domain
1111116Triosephosphate isomerase
79112013969E1-E2 ATPase
141516241722108Core histone H2A/H2B/H3/H4
2132210Copper binding proteins, plastocyanin/azurin family
688991252Alpha amylase, catalytic domain
35663629Phorbol esters/diacylglycerol binding domain (C1 domain)
34545425Bacterial transferase hexapeptide (six repeats)
33332317tRNA synthetases class I (I, L, M and V)
1011121491470Cyclin, N-terminal domain
192219152623124Carboxylesterase family
44444424DNA polymerase family B
33343319ATP synthase subunit C
524310226Peroxidase
315223328Beta-lactamase
33445524C-5 cytosine-specific DNA methylase
112NADH dehydrogenase
232231332724160Calcineurin-like phosphoesterase
8911913757Cellulase (glycosyl hydrolase family 5)
55555631tRNA synthetases class II (D, K and N)
323636413436215Mitochondrial carrier protein
13151612131685Aminotransferase class I and II
56687638Phosphoribosyl transferase domain
13121413101476Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1111116Phosphoglycerate kinase
22232213Ribosomal protein S4/S9 N-terminal domain
22222212Ribosomal protein S12/S23
2111117Chaperonin 10 Kd subunit
131617181819101C2 domain
201819241820119PH domain
56676636bZIP transcription factor
251312151916100Aldehyde dehydrogenase family
505142735388357Fungal Zn(2)-Cys(6) binuclear cluster domain
202324232224136Cytochrome b5-like Heme/Steroid binding domain
11232110Oxidoreductase molybdopterin binding domain
6710881150Oxidoreductase NAD-binding domain
212126222622138SNF2 family N-terminal domain
12232212Ribosomal protein S7p/S5e
192023232021126Ubiquitin-conjugating enzyme
66565533Isocitrate/isopropylmalate dehydrogenase
22222212Ribosomal Proteins L2, RNA binding domain
22222313Hsp90 protein
22222212Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
111115Dihydrofolate reductase
46295531Cysteine-rich secretory protein family
1111116Ribosomal protein S3, C-terminal domain
211228Cupin
113218Annexin
88Eukaryotic-type carbonic anhydrase
333343192-oxoacid dehydrogenases acyltransferase (catalytic domain)
31412213Catalase
1111116Disintegrin
11UDP-glucoronosyl and UDP-glucosyl transferase
55565531Aminotransferase class-III
22242214Ribosomal protein S19
1111116DNA gyrase B
33435422Thiamine pyrophosphate enzyme, central domain
33343319Lyase
22231212Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
1111116Adenylate and Guanylate cyclase catalytic domain
1111116ATP synthase delta (OSCP) subunit
1111116Orotidine 5'-phosphate decarboxylase / HUMPS family
12221210Indole-3-glycerol phosphate synthase
22222212Aromatic amino acid lyase
1111116Pyruvate kinase, barrel domain
9981091055Kinesin motor domain
302832362927182DnaJ domain
14141414141484Proteasome subunit
45277328Major intrinsic protein
1111116ATP synthase
1323312Glycosyl hydrolase family 1
11111163'5'-cyclic nucleotide phosphodiesterase
111115Profilin
2211118Ribosomal protein L22p/L17e
22222212Ribosomal protein L14p/L23e
11141721161392Ubiquitin family
55555732Cofilin/tropomyosin-type actin-binding protein
1221221014-3-3 protein
35225320Alkaline phosphatase
111126Zinc carboxypeptidase
212222244260191Aldo/keto reductase family
12111314151176Myb-like DNA-binding domain
55555833Forkhead domain
123Glycosyl hydrolases family 32 N-terminal domain
1111217Ribosomal protein L16p/L10e
12222211Ribosomal protein S14p/S29e
53368530FKBP-type peptidyl-prolyl cis-trans isomerase
1111116Glutathione peroxidase
21222211
75656736Flavodoxin
1111116Calreticulin family
611934134Common central domain of tyrosinase
787611948Aminotransferase class-V
22212312Ribonucleotide reductase, small chain
464351805567342DEAD/DEAH box helicase
7770921159298544Helicase conserved C-terminal domain
112Fructose-bisphosphate aldolase class-I
111115EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
22222212Ribosomal protein L23
1111116Pyridoxal-dependent decarboxylase, C-terminal sheet domain
1111116Ribosomal protein L5
42545727Pyridoxal-dependent decarboxylase conserved domain
33533320Citrate synthase, C-terminal domain
45465529GHMP kinases N terminal domain
77666537Biotin carboxylase, N-terminal domain
1211117Tryptophan synthase alpha chain
77777843Pyridoxal-phosphate dependent enzyme
12141714151486NUDIX domain
35455628pfkB family carbohydrate kinase
65366329Glycosyl hydrolases family 28
22222313Ribosomal protein L3
22222212Ribosomal protein L11, RNA binding domain
887710949Histidine phosphatase superfamily (branch 1)
1111116Thymidylate synthase
123Lipoxygenase
44444424ATP synthase alpha/beta chain, C terminal domain
45454527Calponin homology (CH) domain
55455529Glutamine amidotransferases class-II
12222110Ribosomal protein S15
325331127Thaumatin family
1111116Fructose-1-6-bisphosphatase, N-terminal domain
1111116Ribonucleotide reductase, all-alpha domain
12221210Ribosomal protein S2
24132416SRF-type transcription factor (DNA-binding and dimerisation domain)
1111111291266GATA zinc finger
141613232021107Amino acid permease
112Bacterial regulatory proteins, crp family
54588737Prolyl oligopeptidase family
1111116Ribosomal protein L30p/L7e
875813950Histidine phosphatase superfamily (branch 2)
1111116Respiratory-chain NADH dehydrogenase, 30 Kd subunit
54484429Aconitase family (aconitate hydratase)
2463520Glycosyl hydrolase family 10
35331217Glycosyl hydrolases family 17
22222212Ribosomal protein S5, N-terminal domain
22222212Nucleoside diphosphate kinase
21333113Tetraspanin family
1225Galactoside-binding lectin
22222212Ribosomal protein S10p/S20e
11384522Arrestin (or S-antigen), N-terminal domain
1121117Phosphoglucose isomerase
1111116Carbohydrate phosphorylase
1111318SecY translocase
1151210Respiratory-chain NADH dehydrogenase, 49 Kd subunit
22222212Ribosomal protein L6
35484630Polyprenyl synthetase
22222212Hexokinase
77486941Dynamin family
1112117Transcription factor TFIID (or TATA-binding protein, TBP)
33452320Rieske [2Fe-2S] domain
11Bacterial regulatory proteins, lacI family
538Proton-conducting membrane transporter
1099814959Biotin-requiring enzyme
1111116Phosphofructokinase
22222212Ribosomal protein S17
1112117Hydroxymethylglutaryl-coenzyme A reductase
34323318FGGY family of carbohydrate kinases, N-terminal domain
7107810951Enoyl-CoA hydratase/isomerase
32222213Ribosomal protein S9/S16
23332215Transcription factor TFIIB repeat
45576633Cytidine and deoxycytidylate deaminase zinc-binding region
1111116Molybdopterin oxidoreductase
817721221994Chromo (CHRromatin Organisation MOdifier) domain
33343420Phosphatidylinositol-specific phospholipase C, Y domain
33344320Phosphatidylinositol-specific phospholipase C, X domain
64645732D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
32263319Malic enzyme, N-terminal domain
11112286-phosphogluconate dehydrogenase, C-terminal domain
1314171312675Multicopper oxidase
9101287955WW domain
22222212Ribosomal RNA adenine dimethylase
113117124221140130845WD domain, G-beta repeat
23234418Heavy-metal-associated domain
33333318Adenylate kinase
21222110Phosphoglucomutase/phosphomannomutase, C-terminal domain
1221118Ribosomal protein S8
12222110Ribosomal protein S11
66575534LIM domain
44Matrixin
43333319Regulator of chromosome condensation (RCC1) repeat
22222212Ribosomal protein S13/S18
123NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
32222213chorismate binding enzyme
3334331960s Acidic ribosomal protein
54465428Prenyltransferase and squalene oxidase repeat
57766738Protein kinase C terminal domain
111115Single-strand binding protein family
1111116S-adenosylmethionine synthetase, N-terminal domain
1010111091161Bromodomain
8119810955Acyl-CoA dehydrogenase, C-terminal domain
15151516161794Ubiquitin carboxyl-terminal hydrolase
11114Ribosomal protein L36
2334113Ribonuclease T2 family
104346431HSF-type DNA-binding
22222212SRP54-type protein, GTPase domain
1111127Urease alpha-subunit, N-terminal domain
131557121062Serine carboxypeptidase
98888849Phosphatidylinositol 3- and 4-kinase
22222313Transketolase, thiamine diphosphate binding domain
262111Glycosyl hydrolases family 11
111115WHEP-TRS domain
33222618Inositol monophosphatase family
55454528Glutaredoxin
65326325Isocitrate lyase family
2111117Serine hydroxymethyltransferase
32222415Iron-containing alcohol dehydrogenase
22122211Ribosomal protein L10
15485528KOW motif
111115Ribosomal protein L34
31323315RF-1 domain
12317Sodium:solute symporter family
111115Imidazoleglycerol-phosphate dehydratase
1111116DNA polymerase family A
1111116IMP dehydrogenase / GMP reductase domain
1111127Glucose-6-phosphate dehydrogenase, NAD binding domain
968981353Protein phosphatase 2C
21133111Nucleotidyl transferase
35778232Carbonic anhydrase
1111116Phosphoribulokinase / Uridine kinase family
10988121360Fatty acid desaturase
66666636MutS domain V
1111116Delta-aminolevulinic acid dehydratase
22225417Arginase family
66666636MCM P-loop domain
1112218Squalene/phytoene synthase
8981111956FHA domain
1113NADH-ubiquinone/plastoquinone oxidoreductase chain 6
292630293231177AMP-binding enzyme
131316491415120G-protein alpha subunit
121626161735122HMG (high mobility group) box
112NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
112Cytochrome c oxidase subunit III
35446931His Kinase A (phospho-acceptor) domain
42222416Armadillo/beta-catenin-like repeat
252729731927200Tetratricopeptide repeat
34322317Ion transport protein
1121117DNA gyrase/topoisomerase IV, subunit A
891012101059BRCA1 C Terminus (BRCT) domain
66676738Glycosyl transferases group 1
34433421Glycosyl transferase family 2
11311310SAM domain (Sterile alpha motif)
31443318linker histone H1 and H5 family
1111116Ribosomal protein L7/L12 C-terminal domain
1118415Pectate lyase
1135212ribonuclease
1111127Urease, gamma subunit
33333318CoA-ligase
546561642Phosphopantetheine attachment site
22223213Formyl transferase
10999101158Metallopeptidase family M24
18141516171696Leucine Rich Repeat
403134204749221alpha/beta hydrolase fold
33333318RNA polymerase Rpb2, domain 6
54574530PB1 domain
22222212Staphylococcal nuclease homologue
101091191160Rab-GTPase-TBC domain
1111116Tudor domain
1112117WH1 domain
32443319Zinc finger, ZZ type
11114HRDC domain
891197852CBS domain
22222212Ribosomal protein L13
22222212Ribosomal protein L4/L1 family
1111116Clp protease
54643426S1 RNA binding domain
11114HIUase/Transthyretin family
43446728AhpC/TSA family
34444423tRNA synthetases class I (W and Y)
1111116UvrD/REP helicase N-terminal domain
44444424Rhodanese-like domain
12222211Universal stress protein family
252328282729160Acetyltransferase (GNAT) family
1111116SecE/Sec61-gamma subunits of protein translocation complex
1111116C-terminal regulatory domain of Threonine dehydratase
22222212AIR synthase related protein, N-terminal domain
56767637tRNA synthetase class II core domain (G, H, P, S and T)
12126Phage integrase family
22252215Tetrapyrrole (Corrin/Porphyrin) Methylases
1111127Glycosyl transferase family, a/b domain
1121128Class II Aldolase and Adducin N-terminal domain
24233418Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
65585635Fes/CIP4, and EFC/F-BAR homology domain
23455423IQ calmodulin-binding motif
22222212Phosphoinositide 3-kinase family, accessory domain (PIK domain)
33343319Phospholipase D Active site motif
1111217Regulator of G protein signaling domain
34445424GTPase-activator protein for Ras-like GTPase
671078644RasGEF domain
57988643RasGEF N-terminal motif
11131213121374RhoGAP domain
14141416121383RhoGEF domain
34444423SPRY domain
33334319RNA polymerase Rpb1, domain 2
1111116Guanylate kinase
43443321Gelsolin repeat
10911109857UBA/TS-N domain
161718181516100PHD-finger
12227GGL domain
55555631HECT-domain (ubiquitin-transferase)
33223215Helix-hairpin-helix motif
11323212MSP (Major sperm protein) domain
79677642Ribonuclease III domain
22222212Region in Clathrin and VPS
33333318RanBP1 domain
22222212PPIC-type PPIASE domain
12453419Zn-finger in Ran binding protein and others
232122302027143Zinc finger C-x8-C-x5-C-x3-H type (and similar)
1111116B-box zinc finger
235431027Poly(ADP-ribose) polymerase catalytic domain
22221110Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
8359197156117254866F-box domain
1112117Elongation factor 1 gamma, conserved domain
11981222Calpain family cysteine protease
12222211Copper fist DNA binding domain
67767538CRAL/TRIO domain
13101917121990BTB/POZ domain
175171119978Ricin-type beta-trefoil lectin domain
111115Inhibitor of Apoptosis domain
33332317Voltage gated chloride channel
941517111167Caspase domain
861028842GDSL-like Lipase/Acylhydrolase
1112128Poly-adenylate binding protein, unique domain
1113118POLO box duplicated region
11NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
151323181624109ABC transporter transmembrane region
6161216Integrase core domain
33334319FAD binding domain
1212713Condensation domain
2111218S-adenosyl-L-homocysteine hydrolase, NAD binding domain
1121319HAMP domain
22222212ribosomal L5P family C-terminus
65555531Insulinase (Peptidase family M16)
44454425Dehydrogenase E1 component
1111116Lumazine binding domain
867107745Elongation factor G C-terminus
45444425HMGL-like
44443423DnaJ central domain
12313111Starch binding domain
22222212Ribosomal protein L1p/L10e family
34657429Cation transporting ATPase, C-terminus
458148544Cation transporter/ATPase, N-terminus
1112117dUTPase
54454426Aconitase C-terminal domain
33455323Amino acid kinase family
1122118N-(5'phosphoribosyl)anthranilate (PRA) isomerase
32343419Acyl transferase domain
1111127Urease beta subunit
22212211Dihydrodipicolinate synthetase family
242524282830159haloacid dehalogenase-like hydrolase
1111239Glycosyl hydrolases family 2
1216911111473Glycosyl hydrolases family 18
1111116Proliferating cell nuclear antigen, N-terminal domain
11Acylphosphatase
1112117Adenylosuccinate synthetase
1111116Asparaginase, N-terminal
33143216Peptidase S24-like
1111116Inorganic pyrophosphatase
47647533Glycosyl hydrolases family 16
22423316Glycosyl hydrolases family 15
5669132059NADH:flavin oxidoreductase / NADH oxidase family
11111163-hydroxyacyl-CoA dehydrogenase, C-terminal domain
43212416Glycosyl hydrolase family 20, catalytic domain
64455529HhH-GPD superfamily base excision DNA repair protein
1111116AIR carboxylase
371234124124160GMC oxidoreductase
22222212Asparagine synthase
1810441314108Fungal cellulose binding domain
77776741Septin
1111116EF-1 guanine nucleotide exchange domain
1111116Homoserine dehydrogenase
37232219Flavin-binding monooxygenase-like
33333318tRNA synthetases class I (E and Q), catalytic domain
1112218tRNA synthetases class I (R)
555177746XPG N-terminal domain
89109101258Metallo-beta-lactamase superfamily
112F5/8 type C domain
44444525Choline/Carnitine o-acyltransferase
1111116Putative esterase
1111116Glycosyl hydrolase family 9
1111116Ferrochelatase
24223215Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
1112117Arginosuccinate synthase
1111116Electron transfer flavoprotein FAD-binding domain
33333318RNB domain
54223622Dioxygenase
45453627CNH domain
21222211Diacylglycerol kinase catalytic domain
11141216121277Dual specificity phosphatase, catalytic domain
1111116MyTH4 domain
54463426P21-Rho-binding domain
15141414151385PX domain
22333215Ras association (RalGDS/AF-6) domain
44462424UBX domain
45464528VHS domain
1111116Phosphoinositide 3-kinase C2
22222212DAHP synthetase I family
52336423Carbon-nitrogen hydrolase
23218N-acetyltransferase
11Geminivirus Rep catalytic domain
1111116Prephenate dehydratase
45545326Syntaxin
55657533Pumilio-family RNA binding repeat
56666534Histone-like transcription factor (CBF/NF-Y) and archaeal histone
1112117Pterin binding enzyme
1111116ER lumen protein retaining receptor
22222212Glycoprotease family
1111116Histidinol dehydrogenase
34333319impB/mucB/samB family
1111116
1111116Ribosomal L15
1111116Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
1111116Ribosomal prokaryotic L21 protein
1111116Ribosomal L28 family
1111116Ribosomal L29 protein
1111116Ribosomal L39 protein
1111116Ribosomal S17
1111116Ribulose-phosphate 3 epimerase family
1111116Translationally controlled tumour protein
12616227Glycosyl hydrolase family 7
22222313RNA pseudouridylate synthase
66676738Histone deacetylase domain
32242417POT family
22262115PWWP domain
151518291924120SET domain
33523521Isochorismatase family
12222211Permease family
1111116Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
559387872XPG I-region
11114Acetokinase family
111115DNA photolyase
11215Cation-independent mannose-6-phosphate receptor repeat
22Nitroreductase family
21141211Cytosol aminopeptidase family, catalytic domain
1124Sulfatase
11111166,7-dimethyl-8-ribityllumazine synthase
1111116Ribosomal protein S16
33332317Acyl CoA binding protein
55695636Cullin family
1111116Elongation factor TS
43366527FAD binding domain
12428151051O-methyltransferase domain
34662425EamA-like transporter family
22222212
77777742ThiF family
111115Ribosomal family S4e
21321110Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
12473320Ammonium Transporter Family
33373423Sulfate permease family
1121117MATH domain
22222212Dehydratase family
21334316Transaldolase/Fructose-6-phosphate aldolase
33333318Mechanosensitive ion channel
1111116GTP cyclohydrolase II
11111163,4-dihydroxy-2-butanone 4-phosphate synthase
44434423Adaptor complexes medium subunit family
788811648Exonuclease
1111116Dipeptidyl peptidase IV (DPP IV) N-terminal region
11NB-ARC domain
8972121250Glycosyl hydrolase family 3 N terminal domain
1111116Ribosomal protein L44
1111116DNA-dependent RNA polymerase
1111116Glycosyl transferase family 4
1112117HCO3- transporter family
12231312Nucleosome assembly protein (NAP)
44445425Synaptobrevin
1113118GMP synthase C terminal domain
1363316Phage lysozyme
1111LAGLIDADG endonuclease
63373426Adenosine/AMP deaminase
33443825Oxidoreductase FAD-binding domain
2112118Thioesterase domain
22222212Histidine biosynthesis protein
33343319Glycosyltransferase family 20
1111116UDP-glucose/GDP-mannose dehydrogenase family, central domain
22241213Carbamoyl-phosphate synthase small chain, CPSase domain
1214PAS fold
11Diguanylate cyclase, GGDEF domain
22222212Probable molybdopterin binding domain
44434423Sec1 family
22222212GDP dissociation inhibitor
66777639Sodium/hydrogen exchanger family
22223213RNA polymerase Rpb3/RpoA insert domain
34443321Initiation factor 2 subunit family
12115PQQ enzyme repeat
22222212Electron transfer flavoprotein domain
111115Uricase
1111116Ribosomal S3Ae family
111115Ribosomal L27 protein
1111116GTP1/OBG
22232415Gamma-glutamyltranspeptidase
1113Ribosomal L40e family
111115GrpE
33373221TatD related DNase
121116Inhibitor of apoptosis-promoting Bax1
1111116Eukaryotic DNA topoisomerase I, catalytic core
33333318Dynamin central region
222311116-O-methylguanine DNA methyltransferase, DNA binding domain
33323216Carboxyl transferase domain
555361741UbiA prenyltransferase family
4