PFAM Domains • Biscogniauxia marginata CBS 124505 v1.0
Annotations/GenomesAntav1Bisma1Bisnum1DalEC12_1Entma1HypEC38_3Xylhyp1TotalAnnotation Description
PFAMs
10,48610,65910,3948,53210,2119,14911,45970,890
11137 transmembrane receptor (rhodopsin family)
111257 transmembrane receptor (Secretin family)
88615453505862426ATPase family associated with various cellular activities (AAA)
49393843384745299ABC transporter
444444428ATP synthase alpha/beta family, nucleotide-binding domain
14151514151415102Elongation factor Tu GTP binding domain
13881011101171Helix-loop-helix DNA-binding domain
222212112Hsp20/alpha crystallin family
891071171567Hsp70 protein
877879753KH domain
1113SH2 domain
27121226122511125SH3 domain
9101010991067Actin
172192566168932419Ankyrin repeat
211312111PAN domain
798878754ADP-ribosylation factor family
22192217221621139Eukaryotic aspartyl protease
444444428Cyclic nucleotide-binding domain
112Cytochrome b(C-terminal)/b6/petD
11Cytochrome b/b6/petB
11111117Cytochrome c
11Double-stranded RNA binding motif
172219318263EF hand
11134Fe-4S binding domain
211212110Fibronectin type III domain
222223215Globin
2012815151911100Glutathione S-transferase, C-terminal domain
21111129Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
855858544Homeodomain
322222215lactate/malate dehydrogenase, NAD binding domain
444445429Myosin head (motor domain)
2381471221181291601941,108Cytochrome P450
181138115113133125174979Protein kinase domain
19121317141418107Pyridine nucleotide-disulphide oxidoreductase
28282825272630192Ras family
1311111310121484Response regulator receiver domain
1265264742RNase H
60555159576049391RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
233232318Copper/zinc superoxide dismutase (SODC)
222222214Iron/manganese superoxide dismutases, alpha-hairpin domain
17222520182121144Subtilase family
59727859536959449Sugar (and other) transporter
1314121112131287Thioredoxin
4121513Trypsin
556445534Tubulin/FtsZ family, GTPase domain
5114415von Willebrand factor type A domain
91242363257029325Zinc finger, C2H2 type
5457437455166Zinc finger, C3HC4 type (RING finger)
10231116336Zinc knuckle
222222214Protein-tyrosine phosphatase
2001231151471171701611,033short chain dehydrogenase
99655363527175478Zinc-binding dehydrogenase
666565640Thiolase, N-terminal domain
69363428333757294Beta-ketoacyl synthase, N-terminal domain
7448574392Fe-2S iron-sulfur cluster binding domain
11Papain family cysteine protease
11111117Enolase, C-terminal TIM barrel domain
112Cytochrome C and Quinol oxidase polypeptide I
119981181066Glutamine amidotransferase class-I
1010101010101070TCP-1/cpn60 chaperonin family
11ATP synthase A chain
444435327Glutamine synthetase, catalytic domain
222222214Triosephosphate isomerase
15212118191820132E1-E2 ATPase
1288888860Core histone H2A/H2B/H3/H4
11Copper binding proteins, plastocyanin/azurin family
667444536Alpha amylase, catalytic domain
222222214Phorbol esters/diacylglycerol binding domain (C1 domain)
777787851Bacterial transferase hexapeptide (six repeats)
455363531tRNA synthetases class I (I, L, M and V)
1077686852Cyclin, N-terminal domain
27181819141822136Carboxylesterase family
444454429DNA polymerase family B
654545534ATP synthase subunit C
545566637Peroxidase
18771015131888Beta-lactamase
444333425C-5 cytosine-specific DNA methylase
11NADH dehydrogenase
28232326242527176Calcineurin-like phosphoesterase
1013151217121796Cellulase (glycosyl hydrolase family 5)
887878753tRNA synthetases class II (D, K and N)
38393738373939267Mitochondrial carrier protein
1113recA bacterial DNA recombination protein
19171816211521127Aminotransferase class I and II
846857442Phosphoribosyl transferase domain
1010101010101070Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1124Ribosome inactivating protein
11111117Phosphoglycerate kinase
222222214Ribosomal protein S4/S9 N-terminal domain
222222214Ribosomal protein S12/S23
1111116Bacterial regulatory helix-turn-helix proteins, AraC family
11111117Chaperonin 10 Kd subunit
1311111210121079C2 domain
188819818988PH domain
1114171015101794bZIP transcription factor
20202018221823141Aldehyde dehydrogenase family
2321521561701501961901,246Fungal Zn(2)-Cys(6) binuclear cluster domain
25262423232425170Cytochrome b5-like Heme/Steroid binding domain
422433321Oxidoreductase molybdopterin binding domain
17141218141817110Oxidoreductase NAD-binding domain
33282726263131202SNF2 family N-terminal domain
222221213Ribosomal protein S7p/S5e
23222121222122152Ubiquitin-conjugating enzyme
7108676751Isocitrate/isopropylmalate dehydrogenase
222222214Ribosomal Proteins L2, RNA binding domain
11111117Hsp90 protein
222222214Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
11111117Dihydrofolate reductase
534615327Chitin recognition protein
222323317Cysteine-rich secretory protein family
11111117Ribosomal protein S3, C-terminal domain
454434327Cupin
212313113Annexin
11111117Eukaryotic-type carbonic anhydrase
211121210Chalcone and stilbene synthases, N-terminal domain
3333333212-oxoacid dehydrogenases acyltransferase (catalytic domain)
554738537Catalase
11111117Disintegrin
14421315UDP-glucoronosyl and UDP-glucosyl transferase
91011768758Aminotransferase class-III
223223216Ribosomal protein S19
11111117DNA gyrase B
734445431Thiamine pyrophosphate enzyme, central domain
445333325Lyase
222232215Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
112Sodium:neurotransmitter symporter family
11111117Adenylate and Guanylate cyclase catalytic domain
11111117ATP synthase delta (OSCP) subunit
11111117Orotidine 5'-phosphate decarboxylase / HUMPS family
11111117Indole-3-glycerol phosphate synthase
22122110Aromatic amino acid lyase
11111117Pyruvate kinase, barrel domain
1211121211121383Kinesin motor domain
31333626283030214DnaJ domain
1414131414141497Proteasome subunit
23342216Major intrinsic protein
11111117ATP synthase
11111229Glycosyl hydrolase family 1
111111173'5'-cyclic nucleotide phosphodiesterase
11111117Profilin
122121211Ribosomal protein L22p/L17e
233222216Ribosomal protein L14p/L23e
1191091010968Ubiquitin family
555555535Cofilin/tropomyosin-type actin-binding protein
23323231814-3-3 protein
522525223Alkaline phosphatase
655565638Zinc carboxypeptidase
39333234273633234Aldo/keto reductase family
159712717673Myb-like DNA-binding domain
844444331Forkhead domain
2121118Glycosyl hydrolases family 32 N-terminal domain
122121211Ribosomal protein L16p/L10e
322222215Ribosomal protein S14p/S29e
433333322FKBP-type peptidyl-prolyl cis-trans isomerase
11111117Glutathione peroxidase
3227
865767746Flavodoxin
11111117Calreticulin family
148912981474Common central domain of tyrosinase
111191112101175Aminotransferase class-V
11111117Ribonucleotide reductase, small chain
41454545444247309DEAD/DEAH box helicase
93757578708080551Helicase conserved C-terminal domain
11111117EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
222222214Ribosomal protein L23
11111117Pyridoxal-dependent decarboxylase, C-terminal sheet domain
11121118Ribosomal protein L5
787676849Pyridoxal-dependent decarboxylase conserved domain
845343633Citrate synthase, C-terminal domain
555555535GHMP kinases N terminal domain
866766645Biotin carboxylase, N-terminal domain
11111117Tryptophan synthase alpha chain
1013111111121179Pyridoxal-phosphate dependent enzyme
24181819172016132NUDIX domain
766686847pfkB family carbohydrate kinase
756373738Glycosyl hydrolases family 28
532212Luciferase-like monooxygenase
222222214Ribosomal protein L3
222212213Ribosomal protein L11, RNA binding domain
18201916171816124Histidine phosphatase superfamily (branch 1)
11111117Thymidylate synthase
441312Lipoxygenase
444444428ATP synthase alpha/beta chain, C terminal domain
555455534Calponin homology (CH) domain
532436225Glutamine amidotransferases class-II
222122213Ribosomal protein S15
21111118Thaumatin family
222222214Fructose-1-6-bisphosphatase, N-terminal domain
11111117Ribonucleotide reductase, all-alpha domain
222122213Ribosomal protein S2
321222214SRF-type transcription factor (DNA-binding and dimerisation domain)
666676643GATA zinc finger
34161633123715163Amino acid permease
656565740Prolyl oligopeptidase family
222212213Ribosomal protein L30p/L7e
6771069550Histidine phosphatase superfamily (branch 2)
11111117Respiratory-chain NADH dehydrogenase, 30 Kd subunit
644544532Aconitase family (aconitate hydratase)
332323218Glycosyl hydrolase family 10
442414221Glycosyl hydrolases family 17
222222214Ribosomal protein S5, N-terminal domain
11111117Nucleoside diphosphate kinase
1124Tetraspanin family
122121211Ribosomal protein S10p/S20e
333342321Arrestin (or S-antigen), N-terminal domain
11111117Phosphoglucose isomerase
11111117Carbohydrate phosphorylase
11111117SecY translocase
11111117Respiratory-chain NADH dehydrogenase, 49 Kd subunit
222222214Ribosomal protein L6
1043353432Polyprenyl synthetase
444535530Hexokinase
11131581291785Dynamin family
31111119Transcription factor TFIID (or TATA-binding protein, TBP)
757676543Rieske [2Fe-2S] domain
1111116Phytochrome region
314Proton-conducting membrane transporter
988988757Biotin-requiring enzyme
11111117Phosphofructokinase
122222112Ribosomal protein S17
11111117Hydroxymethylglutaryl-coenzyme A reductase
333333220FGGY family of carbohydrate kinases, N-terminal domain
1688811101273Enoyl-CoA hydratase/isomerase
222222214Ribosomal protein S9/S16
222222214Transcription factor TFIIB repeat
8109879960Cytidine and deoxycytidylate deaminase zinc-binding region
11111117Molybdopterin oxidoreductase
1266957651Chromo (CHRromatin Organisation MOdifier) domain
444444428Phosphatidylinositol-specific phospholipase C, Y domain
555565637Phosphatidylinositol-specific phospholipase C, X domain
81012967961D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
222222214Malic enzyme, N-terminal domain
2222121126-phosphogluconate dehydrogenase, C-terminal domain
14131481291383Multicopper oxidase
11111110910971WW domain
122112211Ribosomal RNA adenine dimethylase
1113Yeast PIR protein repeat
122103106103106108108756WD domain, G-beta repeat
455446432Heavy-metal-associated domain
557363635Adenylate kinase
222222214Phosphoglucomutase/phosphomannomutase, C-terminal domain
122122313Ribosomal protein S8
222222214Ribosomal protein S11
444444428LIM domain
112Matrixin
244264527Regulator of chromosome condensation (RCC1) repeat
222222214Ribosomal protein S13/S18
322242318chorismate binding enzyme
33333332160s Acidic ribosomal protein
454444530Prenyltransferase and squalene oxidase repeat
644656536Protein kinase C terminal domain
11111117Single-strand binding protein family
11111117S-adenosylmethionine synthetase, N-terminal domain
998898859Bromodomain
1210961191370Acyl-CoA dehydrogenase, C-terminal domain
1413131413141394Ubiquitin carboxyl-terminal hydrolase
11111117Ribosomal protein L36
422242521Ribonuclease T2 family
333333220HSF-type DNA-binding
222232316SRP54-type protein, GTPase domain
11111117Urease alpha-subunit, N-terminal domain
1087988757Serine carboxypeptidase
888888856Phosphatidylinositol 3- and 4-kinase
122121211Transketolase, thiamine diphosphate binding domain
1022332527Glycosyl hydrolases family 11
433343424Inositol monophosphatase family
444444428Glutaredoxin
522524222Isocitrate lyase family
222222214Serine hydroxymethyltransferase
212414317Iron-containing alcohol dehydrogenase
222222214Ribosomal protein L10
432444324KOW motif
111115Ribosomal protein L34
11114Ribosomal protein L33
333333321RF-1 domain
232324218Sodium:solute symporter family
11111117Imidazoleglycerol-phosphate dehydratase
11111117DNA polymerase family A
11111117IMP dehydrogenase / GMP reductase domain
11111117Glucose-6-phosphate dehydrogenase, NAD binding domain
766666744Protein phosphatase 2C
222222214Nucleotidyl transferase
633333425Carbonic anhydrase
11112129Phosphoribulokinase / Uridine kinase family
798555746Fatty acid desaturase
666666642MutS domain V
11112118Delta-aminolevulinic acid dehydratase
544434428Arginase family
666666642MCM P-loop domain
233232318Squalene/phytoene synthase
91110101010969FHA domain
11NADH-ubiquinone/plastoquinone oxidoreductase chain 6
79504743514759376AMP-binding enzyme
533344426G-protein alpha subunit
19888108970HMG (high mobility group) box
11NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
107710891061His Kinase A (phospho-acceptor) domain
333333321Armadillo/beta-catenin-like repeat
32141126132612134Tetratricopeptide repeat
333424322Ion transport protein
11111117DNA gyrase/topoisomerase IV, subunit A
10879611657BRCA1 C Terminus (BRCT) domain
665636436Glycosyl transferases group 1
422324219Glycosyl transferase family 2
113111210SAM domain (Sterile alpha motif)
11111117linker histone H1 and H5 family
11111117Ribosomal protein L7/L12 C-terminal domain
745171429Pectate lyase
423323320ribonuclease
11111117Urease, gamma subunit
444444428CoA-ligase
60473720423166303Phosphopantetheine attachment site
353342323Formyl transferase
9111091191271Metallopeptidase family M24
131315316253Leucine Rich Repeat
5791038115115191alpha/beta hydrolase fold
333333321RNA polymerase Rpb2, domain 6
444443427PB1 domain
222222214Staphylococcal nuclease homologue
9121291291275Rab-GTPase-TBC domain
11111117Tudor domain
11111117WH1 domain
434353325Zinc finger, ZZ type
222212213HRDC domain
966869650CBS domain
222222214Ribosomal protein L13
222222214Ribosomal protein L4/L1 family
11111117Clp protease
444545430S1 RNA binding domain
11111117HIUase/Transthyretin family
533536328AhpC/TSA family
444444428tRNA synthetases class I (W and Y)
121116UvrD/REP helicase N-terminal domain
598795851Rhodanese-like domain
222222214Universal stress protein family
56292841284033255Acetyltransferase (GNAT) family
11111117SecE/Sec61-gamma subunits of protein translocation complex
11111117C-terminal regulatory domain of Threonine dehydratase
222222214AIR synthase related protein, N-terminal domain
877888955tRNA synthetase class II core domain (G, H, P, S and T)
11111117SpoU rRNA Methylase family
222222214Tetrapyrrole (Corrin/Porphyrin) Methylases
11111117Glycosyl transferase family, a/b domain
1113PDZ domain
544343629Class II Aldolase and Adducin N-terminal domain
444444428Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
555555535Fes/CIP4, and EFC/F-BAR homology domain
522425222IQ calmodulin-binding motif
222222214Phosphoinositide 3-kinase family, accessory domain (PIK domain)
533536227Phospholipase D Active site motif
165141422Regulator of G protein signaling domain
444444428GTPase-activator protein for Ras-like GTPase
444344427RasGEF domain
444344427RasGEF N-terminal motif
1099999964RhoGAP domain
666666642RhoGEF domain
343333322SPRY domain
333333321RNA polymerase Rpb1, domain 2
322232317Guanylate kinase
544434428Gelsolin repeat
644646535UBA/TS-N domain
171081715171498PHD-finger
11111117GGL domain
666666642HECT-domain (ubiquitin-transferase)
211212110Helix-hairpin-helix motif
11111117MSP (Major sperm protein) domain
533435427Ribonuclease III domain
244232421Region in Clathrin and VPS
322233318RanBP1 domain
222222214PPIC-type PPIASE domain
323423219Zn-finger in Ran binding protein and others
18101017818889Zinc finger C-x8-C-x5-C-x3-H type (and similar)
422323319Poly(ADP-ribose) polymerase catalytic domain
11111117Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
5914126696617243F-box domain
11111117Elongation factor 1 gamma, conserved domain
433444527Calpain family cysteine protease
11222210Copper fist DNA binding domain
856585744CRAL/TRIO domain
1017931251066BTB/POZ domain
222213214Ricin-type beta-trefoil lectin domain
11111128Inhibitor of Apoptosis domain
333333321Voltage gated chloride channel
853526433Caspase domain
1887157151282GDSL-like Lipase/Acylhydrolase
12111118Poly-adenylate binding protein, unique domain
29201922202323156ABC transporter transmembrane region
667757947FAD binding domain
349109131114100Condensation domain
11111117S-adenosyl-L-homocysteine hydrolase, NAD binding domain
11111117HAMP domain
222222214ribosomal L5P family C-terminus
555565637Insulinase (Peptidase family M16)
333333321Dehydrogenase E1 component
11111117Lumazine binding domain
566666641Elongation factor G C-terminus
544654432HMGL-like
444444428DnaJ central domain
332233420Starch binding domain
233332319Ribosomal protein L1p/L10e family
789877854Cation transporting ATPase, C-terminus
9101011910968Cation transporter/ATPase, N-terminus
11112118dUTPase
644544633Aconitase C-terminal domain
454444429Amino acid kinase family
11111117N-(5'phosphoribosyl)anthranilate (PRA) isomerase
66363228333960294Acyl transferase domain
11111117Urease beta subunit
668565642Dihydrodipicolinate synthetase family
35171735153815172haloacid dehalogenase-like hydrolase
866697951Glycosyl hydrolases family 2
24161316161720122Glycosyl hydrolases family 18
11111117Proliferating cell nuclear antigen, N-terminal domain
111216Translation initiation factor IF-3, C-terminal domain
11111117Acylphosphatase
331212214Adenylosuccinate synthetase
132112111Asparaginase, N-terminal
321323317Peptidase S24-like
11111117Inorganic pyrophosphatase
14191913151316109Glycosyl hydrolases family 16
322232317Glycosyl hydrolases family 15
1067968854NADH:flavin oxidoreductase / NADH oxidase family
111111173-hydroxyacyl-CoA dehydrogenase, C-terminal domain
333332320Glycosyl hydrolase family 20, catalytic domain
576466741HhH-GPD superfamily base excision DNA repair protein
11111117AIR carboxylase
34303028283435219GMC oxidoreductase
323222216Asparagine synthase
226661271776Fungal cellulose binding domain
566565639Septin
11111117EF-1 guanine nucleotide exchange domain
11111117Homoserine dehydrogenase
378324128Flavin-binding monooxygenase-like
11LPXTG cell wall anchor motif
533333424tRNA synthetases class I (E and Q), catalytic domain
321112111tRNA synthetases class I (R)
444434427XPG N-terminal domain
12867610655Metallo-beta-lactamase superfamily
1111116F5/8 type C domain
443232422Choline/Carnitine o-acyltransferase
211222111Putative esterase
11111117Ferrochelatase
222222214Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
121121412Arginosuccinate synthase
11111117Electron transfer flavoprotein FAD-binding domain
333333321RNB domain
8911777857Dioxygenase
333333321CNH domain
222222214Diacylglycerol kinase catalytic domain
877777750Dual specificity phosphatase, catalytic domain
322223216P21-Rho-binding domain
1312121313111387PX domain
322323217Ras association (RalGDS/AF-6) domain
544545431UBX domain
454444429VHS domain
11111117Phosphoinositide 3-kinase C2
222222315DAHP synthetase I family
9111211911972Carbon-nitrogen hydrolase
2211129N-acetyltransferase
11111117Prephenate dehydratase
444444428Syntaxin
544545431Pumilio-family RNA binding repeat
677677747Histone-like transcription factor (CBF/NF-Y) and archaeal histone
11111117Pterin binding enzyme
222222214ER lumen protein retaining receptor
322222215Glycoprotease family
11121219Histidinol dehydrogenase
444444428impB/mucB/samB family
1113
11111117Ribosomal L15
133141417Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
11111117Ribosomal L28 family
11111117Ribosomal L29 protein
11111117Ribosomal L39 protein
11111117Ribosomal S17
11111117Ribulose-phosphate 3 epimerase family
11111117Translationally controlled tumour protein
744555535Glycosyl hydrolase family 7
2114Ring hydroxylating alpha subunit (catalytic domain)
11111117RNA pseudouridylate synthase
434444427Histone deacetylase domain
654664536POT family
11111117PWWP domain
22222119202023147SET domain
117787121062Isochorismatase family
333333321Permease family
11111117Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
544555533XPG I-region
111115Acetokinase family
333333220DNA photolyase
22213616Nitroreductase family
8786611551Sulfatase
111111176,7-dimethyl-8-ribityllumazine synthase
111