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PFAM Domains • Hygrophoropsis aurantiaca ATCC 28755 v1.0
Annotations/GenomesConol1Conpu1Hygaur1Leumo1SerlaS7_3_2SerlaS7_9_2Serla_varsha1TotalAnnotation Description
PFAMs
10,2138,32810,1078,3507,3987,5267,47559,397
41474340424238293ATPase family associated with various cellular activities (AAA)
46475553383843320ABC transporter
444444529ATP synthase alpha/beta family, nucleotide-binding domain
111115EGF-like domain
16151415141414102Elongation factor Tu GTP binding domain
111012118111174Helix-loop-helix DNA-binding domain
81067561052Hsp20/alpha crystallin family
1312321088790Hsp70 protein
888888755KH domain
11Ribulose bisphosphate carboxylase large chain, catalytic domain
111115SH2 domain
15261630242424159SH3 domain
1012121310101178Actin
123532375192241Ankyrin repeat
76101267755ADP-ribosylation factor family
42524741282929268Eukaryotic aspartyl protease
333333220Cyclic nucleotide-binding domain
11Cytochrome b(C-terminal)/b6/petD
112Cytochrome b/b6/petB
111122210Cytochrome c
13115878456Double-stranded RNA binding motif
2141815161681EF hand
1122174Fe-4S binding domain
111115Fibronectin type III domain
112Globin
26381524212218164Glutathione S-transferase, C-terminal domain
11221119Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
9101012710866Homeodomain
232222114lactate/malate dehydrogenase, NAD binding domain
666667946Myosin head (motor domain)
2122261741691551521671,255Cytochrome P450
1711632021921431431411,155Protein kinase domain
10251118171613110Pyridine nucleotide-disulphide oxidoreductase
26253234222323185Ras family
999899962Response regulator receiver domain
151025173373RNase H
61636368606561441RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
1212Reverse transcriptase (RNA-dependent DNA polymerase)
11Serpin (serine protease inhibitor)
1111116Copper/zinc superoxide dismutase (SODC)
222222214Iron/manganese superoxide dismutases, alpha-hairpin domain
12210212231Subtilase family
53474542353645303Sugar (and other) transporter
108101010101068Thioredoxin
555555535Tubulin/FtsZ family, GTPase domain
611223327von Willebrand factor type A domain
28591861363834274Zinc finger, C2H2 type
1353961414645268Zinc finger, C3HC4 type (RING finger)
416141518610595435Zinc knuckle
222233317Protein-tyrosine phosphatase
10010786103737580624short chain dehydrogenase
59713339394135317Zinc-binding dehydrogenase
545444430Thiolase, N-terminal domain
8611711111064Beta-ketoacyl synthase, N-terminal domain
1313333172Fe-2S iron-sulfur cluster binding domain
1111116Enolase, C-terminal TIM barrel domain
112Cytochrome C and Quinol oxidase polypeptide I
112Cytochrome C oxidase subunit II, periplasmic domain
1589988865Glutamine amidotransferase class-I
1010111010101172TCP-1/cpn60 chaperonin family
1113ATP synthase A chain
565533330Glutamine synthetase, catalytic domain
11111117Triosephosphate isomerase
1615171111111293E1-E2 ATPase
17181821161814122Core histone H2A/H2B/H3/H4
11Copper binding proteins, plastocyanin/azurin family
557766642Alpha amylase, catalytic domain
365645534Phorbol esters/diacylglycerol binding domain (C1 domain)
324433322Bacterial transferase hexapeptide (six repeats)
435333324tRNA synthetases class I (I, L, M and V)
101313101217984Cyclin, N-terminal domain
24372520273025188Carboxylesterase family
44654427DNA polymerase family B
333333422ATP synthase subunit C
11111117Peroxidase
653344530Beta-lactamase
568444334C-5 cytosine-specific DNA methylase
25302928242625187Calcineurin-like phosphoesterase
16141917141415109Cellulase (glycosyl hydrolase family 5)
556666741tRNA synthetases class II (D, K and N)
40404338373734269Mitochondrial carrier protein
11recA bacterial DNA recombination protein
21232420141514131Aminotransferase class I and II
374656637Phosphoribosyl transferase domain
1411121311131488Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
11111117Phosphoglycerate kinase
221222213Ribosomal protein S4/S9 N-terminal domain
232212214Ribosomal protein S12/S23
11111117Chaperonin 10 Kd subunit
12121437141323125C2 domain
71791516171596PH domain
958577748bZIP transcription factor
16171616151617113Aldehyde dehydrogenase family
60644456404441349Fungal Zn(2)-Cys(6) binuclear cluster domain
21242324252625168Cytochrome b5-like Heme/Steroid binding domain
344444427Oxidoreductase molybdopterin binding domain
796888753Oxidoreductase NAD-binding domain
24282427222227174SNF2 family N-terminal domain
222222214Ribosomal protein S7p/S5e
21192222162019139Ubiquitin-conjugating enzyme
555555434Isocitrate/isopropylmalate dehydrogenase
222222214Ribosomal Proteins L2, RNA binding domain
222222214Hsp90 protein
222222315Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
11111117Dihydrofolate reductase
333322117Cysteine-rich secretory protein family
11111117Ribosomal protein S3, C-terminal domain
223222518Cupin
3343333222-oxoacid dehydrogenases acyltransferase (catalytic domain)
233344423Catalase
555555535Aminotransferase class-III
222222214Ribosomal protein S19
11111117DNA gyrase B
543333324Thiamine pyrophosphate enzyme, central domain
333334423Lyase
11111117Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
11211129Adenylate and Guanylate cyclase catalytic domain
1111116ATP synthase delta (OSCP) subunit
11111117Orotidine 5'-phosphate decarboxylase / HUMPS family
51111110Indole-3-glycerol phosphate synthase
111133313Aromatic amino acid lyase
11111117Pyruvate kinase, barrel domain
1099119101068Kinesin motor domain
31293031292830208DnaJ domain
15141415141513100Proteasome subunit
664623330Major intrinsic protein
11111117ATP synthase
335333323Glycosyl hydrolase family 1
1111153'5'-cyclic nucleotide phosphodiesterase
11111117Profilin
222222214Ribosomal protein L22p/L17e
222222214Ribosomal protein L14p/L23e
15141615151617108Ubiquitin family
545555534Cofilin/tropomyosin-type actin-binding protein
22321221414-3-3 protein
1113Zinc carboxypeptidase
56724447444341347Aldo/keto reductase family
71251212111271Myb-like DNA-binding domain
765554436Forkhead domain
11Glycosyl hydrolases family 32 N-terminal domain
21211119Ribosomal protein L16p/L10e
211222111Ribosomal protein S14p/S29e
553333325FKBP-type peptidyl-prolyl cis-trans isomerase
11111117Glutathione peroxidase
121116
354555532Flavodoxin
11111117Calreticulin family
61143621Common central domain of tyrosinase
887788652Aminotransferase class-V
325411117Ribonucleotide reductase, small chain
57576758455244380DEAD/DEAH box helicase
829194100909188636Helicase conserved C-terminal domain
11111117Fructose-bisphosphate aldolase class-I
11111117EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
222222214Ribosomal protein L23
11111128Pyridoxal-dependent decarboxylase, C-terminal sheet domain
11111117Ribosomal protein L5
334455731Pyridoxal-dependent decarboxylase conserved domain
324433322Citrate synthase, C-terminal domain
545555534GHMP kinases N terminal domain
777666746Biotin carboxylase, N-terminal domain
11221119Tryptophan synthase alpha chain
778899957Pyridoxal-phosphate dependent enzyme
1411121515171498NUDIX domain
333334322pfkB family carbohydrate kinase
15137777763Glycosyl hydrolases family 28
222222214Ribosomal protein L3
222222214Ribosomal protein L11, RNA binding domain
898767752Histidine phosphatase superfamily (branch 1)
11111117Thymidylate synthase
444444428ATP synthase alpha/beta chain, C terminal domain
545755536Calponin homology (CH) domain
352566633Glutamine amidotransferases class-II
222222214Ribosomal protein S15
13113165645Thaumatin family
11111117Fructose-1-6-bisphosphatase, N-terminal domain
11221119Ribonucleotide reductase, all-alpha domain
222222214Ribosomal protein S2
222222113SRF-type transcription factor (DNA-binding and dimerisation domain)
10101091010867GATA zinc finger
13331329242522159Amino acid permease
111010119101475Prolyl oligopeptidase family
222111110Ribosomal protein L30p/L7e
12172018111113102Histidine phosphatase superfamily (branch 2)
11111117Respiratory-chain NADH dehydrogenase, 30 Kd subunit
555544432Aconitase family (aconitate hydratase)
333311216Glycosyl hydrolase family 10
11111117Glycosyl hydrolases family 17
232212113Ribosomal protein S5, N-terminal domain
21111118Nucleoside diphosphate kinase
317422221Tetraspanin family
145Galactoside-binding lectin
212211110Ribosomal protein S10p/S20e
335433324Arrestin (or S-antigen), N-terminal domain
11221119Phosphoglucose isomerase
11111117Carbohydrate phosphorylase
21111118SecY translocase
11111117Respiratory-chain NADH dehydrogenase, 49 Kd subunit
222222214Ribosomal protein L6
446556636Polyprenyl synthetase
332222216Hexokinase
1479899965Dynamin family
11111117Transcription factor TFIID (or TATA-binding protein, TBP)
332444222Rieske [2Fe-2S] domain
112Phytochrome region
2114Proton-conducting membrane transporter
988988757Biotin-requiring enzyme
11111117Phosphofructokinase
222221213Ribosomal protein S17
11111117Hydroxymethylglutaryl-coenzyme A reductase
333333321FGGY family of carbohydrate kinases, N-terminal domain
887888855Enoyl-CoA hydratase/isomerase
222222315Ribosomal protein S9/S16
222222214Transcription factor TFIIB repeat
868867750Cytidine and deoxycytidylate deaminase zinc-binding region
11111117Molybdopterin oxidoreductase
7761151139104Chromo (CHRromatin Organisation MOdifier) domain
222222214Phosphatidylinositol-specific phospholipase C, Y domain
323322217Phosphatidylinositol-specific phospholipase C, X domain
778866547D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
333333321Malic enzyme, N-terminal domain
111211186-phosphogluconate dehydrogenase, C-terminal domain
88111466659Multicopper oxidase
10781088657WW domain
222222214Ribosomal RNA adenine dimethylase
1862172342701281371821,354WD domain, G-beta repeat
333333321Heavy-metal-associated domain
333433322Adenylate kinase
222122213Phosphoglucomutase/phosphomannomutase, C-terminal domain
21211119Ribosomal protein S8
212222112Ribosomal protein S11
656647438LIM domain
545222222Regulator of chromosome condensation (RCC1) repeat
212212212Ribosomal protein S13/S18
11NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
222222113chorismate binding enzyme
33331331960s Acidic ribosomal protein
455544532Prenyltransferase and squalene oxidase repeat
575867543Protein kinase C terminal domain
1111116Single-strand binding protein family
11111128S-adenosylmethionine synthetase, N-terminal domain
101010109101170Bromodomain
899899860Acyl-CoA dehydrogenase, C-terminal domain
16141514141513101Ubiquitin carboxyl-terminal hydrolase
111115Ribosomal protein L36
333422219Ribonuclease T2 family
544433326HSF-type DNA-binding
222222214SRP54-type protein, GTPase domain
11111117Urease alpha-subunit, N-terminal domain
1212131012121687Serine carboxypeptidase
11Apoptosis regulator proteins, Bcl-2 family
888978856Phosphatidylinositol 3- and 4-kinase
222222113Transketolase, thiamine diphosphate binding domain
1111116WHEP-TRS domain
222222214Inositol monophosphatase family
444444428Glutaredoxin
232333420Isocitrate lyase family
11111117Serine hydroxymethyltransferase
227222219Iron-containing alcohol dehydrogenase
222222214Ribosomal protein L10
455544532KOW motif
11111117Ribosomal protein L34
112Ribosomal protein L33
323333320RF-1 domain
545534329Sodium:solute symporter family
11114Imidazoleglycerol-phosphate dehydratase
1111116DNA polymerase family A
11111117IMP dehydrogenase / GMP reductase domain
11111117Glucose-6-phosphate dehydrogenase, NAD binding domain
98101010101067Protein phosphatase 2C
333333220Nucleotidyl transferase
552344427Carbonic anhydrase
112111310Phosphoribulokinase / Uridine kinase family
67771112959Fatty acid desaturase
656667642MutS domain V
11111117Delta-aminolevulinic acid dehydratase
654533430Arginase family
666666642MCM P-loop domain
213111110Squalene/phytoene synthase
17191412810989FHA domain
11NADH-ubiquinone/plastoquinone oxidoreductase chain 6
41405332434948306AMP-binding enzyme
15141316141415101G-protein alpha subunit
13141416141518104HMG (high mobility group) box
11NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
112Haemagglutinin
123Cytochrome c oxidase subunit III
564554534His Kinase A (phospho-acceptor) domain
233223318Armadillo/beta-catenin-like repeat
11211428323539180Tetratricopeptide repeat
433222218Ion transport protein
11211118DNA gyrase/topoisomerase IV, subunit A
997999860BRCA1 C Terminus (BRCT) domain
344666635Glycosyl transferases group 1
231345422Glycosyl transferase family 2
2237SAM domain (Sterile alpha motif)
232334421linker histone H1 and H5 family
11111117Ribosomal protein L7/L12 C-terminal domain
11123210ribonuclease
11111117Urease, gamma subunit
333333321CoA-ligase
14122213192420124Phosphopantetheine attachment site
232222215Formyl transferase
109101010101372Metallopeptidase family M24
21431812141477Leucine Rich Repeat
545836344036204alpha/beta hydrolase fold
333333321RNA polymerase Rpb2, domain 6
776535336PB1 domain
222222214Staphylococcal nuclease homologue
1710121089975Rab-GTPase-TBC domain
11111117Tudor domain
212222213WH1 domain
333333321Zinc finger, ZZ type
111115HRDC domain
797999959CBS domain
222222214Ribosomal protein L13
222222214Ribosomal protein L4/L1 family
11111117Clp protease
555433328S1 RNA binding domain
111115HIUase/Transthyretin family
454744432AhpC/TSA family
434444427tRNA synthetases class I (W and Y)
11211118UvrD/REP helicase N-terminal domain
12511555548Rhodanese-like domain
222222113Universal stress protein family
21352038263234206Acetyltransferase (GNAT) family
11111117SecE/Sec61-gamma subunits of protein translocation complex
11111117C-terminal regulatory domain of Threonine dehydratase
222222315AIR synthase related protein, N-terminal domain
565666741tRNA synthetase class II core domain (G, H, P, S and T)
11Phage integrase family
222222113Tetrapyrrole (Corrin/Porphyrin) Methylases
11131119Glycosyl transferase family, a/b domain
231111211Class II Aldolase and Adducin N-terminal domain
334433222Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
555555434Fes/CIP4, and EFC/F-BAR homology domain
332333320IQ calmodulin-binding motif
222222214Phosphoinositide 3-kinase family, accessory domain (PIK domain)
242444424Phospholipase D Active site motif
312111110Regulator of G protein signaling domain
434444528GTPase-activator protein for Ras-like GTPase
868766748RasGEF domain
787878853RasGEF N-terminal motif
1414121311131390RhoGAP domain
1414141410121391RhoGEF domain
434444427SPRY domain
333333321RNA polymerase Rpb1, domain 2
1111116Guanylate kinase
323355425Gelsolin repeat
8879891160UBA/TS-N domain
17151519191916120PHD-finger
2215GGL domain
655555637HECT-domain (ubiquitin-transferase)
11131119Helix-hairpin-helix motif
11111117MSP (Major sperm protein) domain
464977643Ribonuclease III domain
526222221Region in Clathrin and VPS
423323320RanBP1 domain
122222112PPIC-type PPIASE domain
341311215Zn-finger in Ran binding protein and others
12221123161715116Zinc finger C-x8-C-x5-C-x3-H type (and similar)
1111116B-box zinc finger
9123418151273Poly(ADP-ribose) polymerase catalytic domain
942222223Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
271073888445354411F-box domain
11111117Elongation factor 1 gamma, conserved domain
1111116Calpain family cysteine protease
222222214Copper fist DNA binding domain
867755644CRAL/TRIO domain
53353224191725205BTB/POZ domain
122218Ricin-type beta-trefoil lectin domain
11111117Inhibitor of Apoptosis domain
222222214Voltage gated chloride channel
6961456450Caspase domain
6691055445GDSL-like Lipase/Acylhydrolase
11111117Poly-adenylate binding protein, unique domain
11111117POLO box duplicated region
11NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
25223727171820166ABC transporter transmembrane region
21618Integrase core domain
333333321FAD binding domain
54659111252Condensation domain
22Bacterial flagellin N-terminal helical region
11111117S-adenosyl-L-homocysteine hydrolase, NAD binding domain
11111139HAMP domain
212212212ribosomal L5P family C-terminus
555566638Insulinase (Peptidase family M16)
547534432Dehydrogenase E1 component
11111117Lumazine binding domain
776766544Elongation factor G C-terminus
555644433HMGL-like
444444428DnaJ central domain
222222113Starch binding domain
323212215Ribosomal protein L1p/L10e family
766555539Cation transporting ATPase, C-terminus
887667749Cation transporter/ATPase, N-terminus
11111117dUTPase
555544533Aconitase C-terminal domain
333333321Amino acid kinase family
611111112N-(5'phosphoribosyl)anthranilate (PRA) isomerase
961078131063Acyl transferase domain
11111117Urease beta subunit
22Bacterial flagellin C-terminal helical region
222222315Dihydrodipicolinate synthetase family
13301328303028172haloacid dehalogenase-like hydrolase
222221213Glycosyl hydrolases family 2
151411889873Glycosyl hydrolases family 18
411111110Proliferating cell nuclear antigen, N-terminal domain
11Translation initiation factor IF-3, C-terminal domain
11111117Adenylosuccinate synthetase
11111117Asparaginase, N-terminal
333233320Peptidase S24-like
11111117Inorganic pyrophosphatase
12310322335Glycosyl hydrolases family 16
222222214Glycosyl hydrolases family 15
2119131011111095NADH:flavin oxidoreductase / NADH oxidase family
122111193-hydroxyacyl-CoA dehydrogenase, C-terminal domain
443322220Glycosyl hydrolase family 20, catalytic domain
666665540HhH-GPD superfamily base excision DNA repair protein
11111117AIR carboxylase
22211616141423126GMC oxidoreductase
222233418Asparagine synthase
228888642Fungal cellulose binding domain
666666541Septin
11111117EF-1 guanine nucleotide exchange domain
11111117Homoserine dehydrogenase
824734129Flavin-binding monooxygenase-like
333333422tRNA synthetases class I (E and Q), catalytic domain
11111117tRNA synthetases class I (R)
657555538XPG N-terminal domain
101281210121175Metallo-beta-lactamase superfamily
1113F5/8 type C domain
544444530Choline/Carnitine o-acyltransferase
11111117Putative esterase
11121118Glycosyl hydrolase family 9
11111117Ferrochelatase
222222214Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
11111117Arginosuccinate synthase
11111117Electron transfer flavoprotein FAD-binding domain
333333220RNB domain
641111115Dioxygenase
535555533CNH domain
222212112Diacylglycerol kinase catalytic domain
1310111210121179Dual specificity phosphatase, catalytic domain
1111116MyTH4 domain
343322219P21-Rho-binding domain
1413151514141499PX domain
322233217Ras association (RalGDS/AF-6) domain
444444226UBX domain
555555535VHS domain
11111117Phosphoinositide 3-kinase C2
222222214DAHP synthetase I family
434444326Carbon-nitrogen hydrolase
224Geminivirus Rep catalytic domain
1111116Prephenate dehydratase
444555532Syntaxin
554555534Pumilio-family RNA binding repeat
777757747Histone-like transcription factor (CBF/NF-Y) and archaeal histone
11111117Pterin binding enzyme
11111117ER lumen protein retaining receptor
222222214Glycoprotease family
11111117Histidinol dehydrogenase
333333220impB/mucB/samB family
111115
11111117Ribosomal L15
313111111Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
1111116Ribosomal prokaryotic L21 protein
11111128Ribosomal L28 family
11111117Ribosomal L29 protein
11111117Ribosomal L39 protein
11111117Ribosomal S17
1111116Ribulose-phosphate 3 epimerase family
11111117Translationally controlled tumour protein
12115Glycosyl hydrolase family 7
222222214RNA pseudouridylate synthase
656688847Histone deacetylase domain
221111210POT family
222211111PWWP domain
14141715151712104SET domain
547833131Isochorismatase family
222222214Permease family
11111117Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
61112655651XPG I-region
11114Acetokinase family