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PFAM Domains • Coccomyxa sp. C-169
Annotations/GenomesChlNC64A_1Chlre4Coc_C169_1TotalAnnotation Description
PFAMs
6,6897,5657,79722,051
485250150ATPase family associated with various cellular activities (AAA)
606455179ABC transporter
34411ATP synthase alpha/beta family, nucleotide-binding domain
39315EGF-like domain
16172053Elongation factor Tu GTP binding domain
28515Helix-loop-helix DNA-binding domain
36615Hsp20/alpha crystallin family
1181029Hsp70 protein
13131137KH domain
213Kunitz/Bovine pancreatic trypsin inhibitor domain
22SH2 domain
112SH3 domain
9312TNFR/NGFR cysteine-rich region
45615Actin
11110737255Ankyrin repeat
1212327PAN domain
716831ADP-ribosylation factor family
33814Eukaryotic aspartyl protease
7181237Cyclic nucleotide-binding domain
1113Cystatin domain
3429Cytochrome c
2248Double-stranded RNA binding motif
4010133174EF hand
665174Fe-4S binding domain
84214Fibronectin type III domain
691227Glutathione S-transferase, C-terminal domain
43310Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
224Homeodomain
6713Kazal-type serine protease inhibitor domain
2125Laminin EGF domain
55616lactate/malate dehydrogenase, NAD binding domain
1515Lectin C-type domain
3115Ligand-gated ion channel
3339Myosin head (motor domain)
20353893Cytochrome P450
200423150773Protein kinase domain
15161647Pyridine nucleotide-disulphide oxidoreductase
12141440Ras family
712827Response regulator receiver domain
22RNase H
888584257RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
213Serpin (serine protease inhibitor)
54615Iron/manganese superoxide dismutases, alpha-hairpin domain
19101241Subtilase family
19162257Sugar (and other) transporter
28262983Thioredoxin
112Trefoil (P-type) domain
3491154Trypsin
325Thrombospondin type 1 domain
410620Tubulin/FtsZ family, GTPase domain
65213von Willebrand factor type A domain
108321Zinc finger, C2H2 type
537954186Zinc finger, C3HC4 type (RING finger)
17121039Zinc knuckle
2215Ribulose bisphosphate carboxylase, small chain
314Protein-tyrosine phosphatase
413670147short chain dehydrogenase
13132349Zinc-binding dehydrogenase
4228Thiolase, N-terminal domain
1341330Beta-ketoacyl synthase, N-terminal domain
151310382Fe-2S iron-sulfur cluster binding domain
1615839Papain family cysteine protease
1124Enolase, C-terminal TIM barrel domain
11Cytochrome C oxidase subunit II, periplasmic domain
65617Glutamine amidotransferase class-I
11121134TCP-1/cpn60 chaperonin family
11ATP synthase A chain
35513Glutamine synthetase, catalytic domain
2125Triosephosphate isomerase
15201651E1-E2 ATPase
3312435192Core histone H2A/H2B/H3/H4
11Bacterial regulatory helix-turn-helix protein, lysR family
1113Copper binding proteins, plastocyanin/azurin family
981128Alpha amylase, catalytic domain
8121535Bacterial transferase hexapeptide (six repeats)
85518tRNA synthetases class I (I, L, M and V)
614727Cyclin, N-terminal domain
112Carboxylesterase family
54514DNA polymerase family B
2428ATP synthase subunit C
36615Peroxidase
235Beta-lactamase
65718C-5 cytosine-specific DNA methylase
39253397Calcineurin-like phosphoesterase
21012Cellulase (glycosyl hydrolase family 5)
55515tRNA synthetases class II (D, K and N)
324441117Mitochondrial carrier protein
11recA bacterial DNA recombination protein
11112042Aminotransferase class I and II
59721Phosphoribosyl transferase domain
2114Sigma-54 interaction domain
18241961Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
2237Phosphoglycerate kinase
1124Ribosomal protein S4/S9 N-terminal domain
1214Ribosomal protein S12/S23
44412Chaperonin 10 Kd subunit
16281458C2 domain
85518PH domain
761225bZIP transcription factor
88925Aldehyde dehydrogenase family
6141232Cytochrome b5-like Heme/Steroid binding domain
2237Oxidoreductase molybdopterin binding domain
1181029Oxidoreductase NAD-binding domain
19172763SNF2 family N-terminal domain
2215Ribosomal protein S7p/S5e
23212468Ubiquitin-conjugating enzyme
34411Isocitrate/isopropylmalate dehydrogenase
2226Ribosomal Proteins L2, RNA binding domain
11Chitinase class I
43310Hsp90 protein
2226Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1113Dihydrofolate reductase
123Chitin recognition protein
81321Cysteine-rich secretory protein family
1214Ribosomal protein S3, C-terminal domain
4127Cupin
4329Eukaryotic-type carbonic anhydrase
11Chalcone and stilbene synthases, N-terminal domain
465152-oxoacid dehydrogenases acyltransferase (catalytic domain)
1146Catalase
11Disintegrin
31711UDP-glucoronosyl and UDP-glucosyl transferase
87722Aminotransferase class-III
1124Ribosomal protein S19
2226DNA gyrase B
42410Thiamine pyrophosphate enzyme, central domain
3137Lyase
4239Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
42612Ferritin-like domain
165167Adenylate and Guanylate cyclase catalytic domain
2226ATP synthase delta (OSCP) subunit
1113Orotidine 5'-phosphate decarboxylase / HUMPS family
112Bacterial DNA-binding protein
1124Indole-3-glycerol phosphate synthase
57517Pyruvate kinase, barrel domain
26352384Kinesin motor domain
485949156DnaJ domain
14151645Proteasome subunit
53715Major intrinsic protein
2226ATP synthase
22812Glycosyl hydrolase family 1
2263313'5'-cyclic nucleotide phosphodiesterase
314Protease inhibitor/seed storage/LTP family
1113Profilin
3339Ribosomal protein L22p/L17e
2226Ribosomal protein L14p/L23e
12202254Ubiquitin family
1113Cofilin/tropomyosin-type actin-binding protein
121414-3-3 protein
112Alkaline phosphatase
38516Zinc carboxypeptidase
18171853Aldo/keto reductase family
26332786Myb-like DNA-binding domain
2338Glycosyl hydrolases family 32 N-terminal domain
11Ribosomal protein L16p/L10e
112Ribosomal protein S14p/S29e
16231554FKBP-type peptidyl-prolyl cis-trans isomerase
65314Glutathione peroxidase
3238
610824Flavodoxin
2226Calreticulin family
1124Thymidine kinase
86923Aminotransferase class-V
3238Ribonucleotide reductase, small chain
575557169DEAD/DEAH box helicase
838399265Helicase conserved C-terminal domain
34411Fructose-bisphosphate aldolase class-I
1124EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
1124Ribosomal protein L23
34411Pyridoxal-dependent decarboxylase, C-terminal sheet domain
11Potato inhibitor I family
1113Ribosomal protein L5
52613Pyridoxal-dependent decarboxylase conserved domain
2136Citrate synthase, C-terminal domain
66517GHMP kinases N terminal domain
74617Biotin carboxylase, N-terminal domain
1113Tryptophan synthase alpha chain
1491134Pyridoxal-phosphate dependent enzyme
18271762NUDIX domain
107926pfkB family carbohydrate kinase
112Glycosyl hydrolases family 28
3238Ribosomal protein L3
2338Ribosomal protein L11, RNA binding domain
7131434Histidine phosphatase superfamily (branch 1)
3429Rubredoxin
1113Thymidylate synthase
1124Lipoxygenase
34310ATP synthase alpha/beta chain, C terminal domain
1214Calponin homology (CH) domain
42612Glutamine amidotransferases class-II
224Phosphoenolpyruvate carboxylase
3328Ribosomal protein S15
3137'Cold-shock' DNA-binding domain
43512Fructose-1-6-bisphosphatase, N-terminal domain
1113Ribonucleotide reductase, all-alpha domain
1113Ribosomal protein S2
224SRF-type transcription factor (DNA-binding and dimerisation domain)
77721GATA zinc finger
521623Amino acid permease
55717Prolyl oligopeptidase family
1225Ribosomal protein L30p/L7e
123Histidine phosphatase superfamily (branch 2)
11Respiratory-chain NADH dehydrogenase, 30 Kd subunit
1225Aconitase family (aconitate hydratase)
3238Ribosomal protein S5, N-terminal domain
3429Nucleoside diphosphate kinase
11Tetraspanin family
43310Ribosomal protein S10p/S20e
2114Phosphoglucose isomerase
2226Carbohydrate phosphorylase
2338SecY translocase
11Respiratory-chain NADH dehydrogenase, 49 Kd subunit
2237Ribosomal protein L6
44412Polyprenyl synthetase
1124Hexokinase
56617Dynamin family
1113Biopterin-dependent aromatic amino acid hydroxylase
1113Transcription factor TFIID (or TATA-binding protein, TBP)
15161849Rieske [2Fe-2S] domain
11Proton-conducting membrane transporter
12101032Biotin-requiring enzyme
4239Phosphofructokinase
3339Ribosomal protein S17
3328FGGY family of carbohydrate kinases, N-terminal domain
1124Sodium:dicarboxylate symporter family
96823Enoyl-CoA hydratase/isomerase
2226Ribosomal protein S9/S16
2237Transcription factor TFIIB repeat
106723Cytidine and deoxycytidylate deaminase zinc-binding region
112Molybdopterin oxidoreductase
369Chromo (CHRromatin Organisation MOdifier) domain
11Phosphatidylinositol-specific phospholipase C, Y domain
11Phosphatidylinositol-specific phospholipase C, X domain
44715D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
36514Malic enzyme, N-terminal domain
123PEP-utilising enzyme, mobile domain
11136-phosphogluconate dehydrogenase, C-terminal domain
2226Multicopper oxidase
1214Granulin
10171340WW domain
2226Ribosomal RNA adenine dimethylase
132170124426WD domain, G-beta repeat
67619Heavy-metal-associated domain
22Transferrin
58518Adenylate kinase
2237Phosphoglucomutase/phosphomannomutase, C-terminal domain
112Ribosomal protein S8
1124Ribosomal protein S11
112LIM domain
1691136Regulator of chromosome condensation (RCC1) repeat
2327Ribosomal protein S13/S18
11NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
4228chorismate binding enzyme
3341060s Acidic ribosomal protein
1113ATP synthase B/B' CF(0)
112CUB domain
3339Prenyltransferase and squalene oxidase repeat
2226Protein kinase C terminal domain
213Single-strand binding protein family
1113S-adenosylmethionine synthetase, N-terminal domain
8101331Bromodomain
86721Acyl-CoA dehydrogenase, C-terminal domain
17161649Ubiquitin carboxyl-terminal hydrolase
112Ribosomal protein L36
3115Ribonuclease T2 family
1214HSF-type DNA-binding
44412SRP54-type protein, GTPase domain
77519Serine carboxypeptidase
1113Ribosomal protein L20
691025Phosphatidylinositol 3- and 4-kinase
1113Transketolase, thiamine diphosphate binding domain
112WHEP-TRS domain
56415Inositol monophosphatase family
1071027Glutaredoxin
1124Isocitrate lyase family
3328Serine hydroxymethyltransferase
235Iron-containing alcohol dehydrogenase
3339Ribosomal protein L10
77519KOW motif
2226Ribosomal protein L34
2215Ribosomal protein L33
3339RF-1 domain
6713Sodium:solute symporter family
112Imidazoleglycerol-phosphate dehydratase
2226DNA polymerase family A
1113IMP dehydrogenase / GMP reductase domain
2125Glucose-6-phosphate dehydrogenase, NAD binding domain
23232066Protein phosphatase 2C
46616Nucleotidyl transferase
3429Carbonic anhydrase
54413Phosphoribulokinase / Uridine kinase family
6101228Fatty acid desaturase
65920MutS domain V
1113Delta-aminolevulinic acid dehydratase
88824MCM P-loop domain
2237Squalene/phytoene synthase
13111236FHA domain
17111745AMP-binding enzyme
24363191Chlorophyll A-B binding protein
59721HMG (high mobility group) box
11NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
11Cytochrome c oxidase subunit III
47314His Kinase A (phospho-acceptor) domain
27161154Armadillo/beta-catenin-like repeat
535746156Tetratricopeptide repeat
732241Ion transport protein
2226DNA gyrase/topoisomerase IV, subunit A
1214Binding-protein-dependent transport system inner membrane component
132538Scavenger receptor cysteine-rich domain
64818BRCA1 C Terminus (BRCT) domain
12141642Glycosyl transferases group 1
55717Glycosyl transferase family 2
4610SAM domain (Sterile alpha motif)
1337linker histone H1 and H5 family
1214Ribosomal protein L7/L12 C-terminal domain
112Nitrogen regulatory protein P-II
3238CoA-ligase
431421Phosphopantetheine attachment site
34310Formyl transferase
77923Metallopeptidase family M24
969055241Leucine Rich Repeat
18183975alpha/beta hydrolase fold
2338RNA polymerase Rpb2, domain 6
123PB1 domain
3216Staphylococcal nuclease homologue
79925Rab-GTPase-TBC domain
112Tudor domain
54312Zinc finger, ZZ type
1315HRDC domain
15131947CBS domain
3339Ribosomal protein L13
3328Ribosomal protein L4/L1 family
78823Clp protease
65718S1 RNA binding domain
1113HIUase/Transthyretin family
571123AhpC/TSA family
34613tRNA synthetases class I (W and Y)
224UvrD/REP helicase N-terminal domain
11121033Rhodanese-like domain
93719Universal stress protein family
35322491Acetyltransferase (GNAT) family
1113SecE/Sec61-gamma subunits of protein translocation complex
2125C-terminal regulatory domain of Threonine dehydratase
2226AIR synthase related protein, N-terminal domain
98926tRNA synthetase class II core domain (G, H, P, S and T)
68620SpoU rRNA Methylase family
33Phage integrase family
43411Tetrapyrrole (Corrin/Porphyrin) Methylases
1113Glycosyl transferase family, a/b domain
810422PDZ domain
123Class II Aldolase and Adducin N-terminal domain
123
2226Diacylglycerol kinase accessory domain
112Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
932950IQ calmodulin-binding motif
224Phosphoinositide 3-kinase family, accessory domain (PIK domain)
112Phospholipase D Active site motif
1113RhoGAP domain
45514SPRY domain
336RNA polymerase Rpb1, domain 2
1427Guanylate kinase
33410Gelsolin repeat
7151739UBA/TS-N domain
27282782PHD-finger
2237Filamin/ABP280 repeat
68721HECT-domain (ubiquitin-transferase)
4127Helix-hairpin-helix motif
112BRCA2 repeat
2125MSP (Major sperm protein) domain
43411Ribonuclease III domain
1113Region in Clathrin and VPS
2125RanBP1 domain
2226PPIC-type PPIASE domain
43512Zn-finger in Ran binding protein and others
29222172Zinc finger C-x8-C-x5-C-x3-H type (and similar)
1124B-box zinc finger
224Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
676321151F-box domain
11Elongation factor 1 gamma, conserved domain
44Calpain family cysteine protease
10151136CRAL/TRIO domain
1311143BTB/POZ domain
11Ricin-type beta-trefoil lectin domain
65819Voltage gated chloride channel
1236Caspase domain
72716GDSL-like Lipase/Acylhydrolase
1124Poly-adenylate binding protein, unique domain
19161247ABC transporter transmembrane region
11Integrase core domain
34310FAD binding domain
112Condensation domain
1113S-adenosyl-L-homocysteine hydrolase, NAD binding domain
1113ribosomal L5P family C-terminus
57921Insulinase (Peptidase family M16)
54716Dehydrogenase E1 component
1113Lumazine binding domain
77923Elongation factor G C-terminus
3339HMGL-like
2338DnaJ central domain
347Sulfotransferase domain
1810634Starch binding domain
3339Ribosomal protein L1p/L10e family
59418Cation transporting ATPase, C-terminus
711927Cation transporter/ATPase, N-terminus
1113dUTPase
11Thymidine kinase from herpesvirus
2226Aconitase C-terminal domain
77822Amino acid kinase family
1113N-(5'phosphoribosyl)anthranilate (PRA) isomerase
21912Acyl transferase domain
1124Dihydrodipicolinate synthetase family
404335118haloacid dehalogenase-like hydrolase
167Glycosyl hydrolases family 2
27110Glycosyl hydrolases family 18
2125Proliferating cell nuclear antigen, N-terminal domain
2226Translation initiation factor IF-3, C-terminal domain
1113Acylphosphatase
1113Adenylosuccinate synthetase
2114Asparaginase, N-terminal
34411Peptidase S24-like
2338Inorganic pyrophosphatase
6118Glycosyl hydrolases family 16
1427NADH:flavin oxidoreductase / NADH oxidase family
22263-hydroxyacyl-CoA dehydrogenase, C-terminal domain
325Glycosyl hydrolase family 20, catalytic domain
54615HhH-GPD superfamily base excision DNA repair protein
1113AIR carboxylase
1135GMC oxidoreductase
1225Asparagine synthase
2136Septin
11EF-1 guanine nucleotide exchange domain
1225Homoserine dehydrogenase
11Flavin-binding monooxygenase-like
112Glutamyl-tRNAGlu reductase, dimerisation domain
3339tRNA synthetases class I (E and Q), catalytic domain
1113tRNA synthetases class I (R)
44412XPG N-terminal domain
1071532Metallo-beta-lactamase superfamily
1214F5/8 type C domain
2215Putative esterase
43916Glycosyl hydrolase family 9
1113Ferrochelatase
2316Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
1113Arginosuccinate synthase
1113Electron transfer flavoprotein FAD-binding domain
42410RNB domain
11Dioxygenase
11CNH domain
31610Diacylglycerol kinase catalytic domain
691429Dual specificity phosphatase, catalytic domain
1113MyTH4 domain
336
43512PX domain
74819UBX domain
1113Phosphoinositide 3-kinase C2
112DAHP synthetase I family
65617Carbon-nitrogen hydrolase
11Photosystem I reaction centre subunit VIII
112Prephenate dehydratase
34310Syntaxin
44311Pentapeptide repeats (8 copies)
2439Pumilio-family RNA binding repeat
56718Histone-like transcription factor (CBF/NF-Y) and archaeal histone
3216Pterin binding enzyme
2125ER lumen protein retaining receptor
224tRNA N6-adenosine threonylcarbamoyltransferase
1113Histidinol dehydrogenase
54514impB/mucB/samB family
1113
1113Ribosomal L15
1113Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
2226Ribosomal prokaryotic L21 protein
2125Ribosomal L28 family
1225Ribosomal L29 protein
1113Ribosomal L39 protein
1113Ribosomal S17
3216Ribulose-phosphate 3 epimerase family
11Translationally controlled tumour protein
2327Cysteine rich repeat
18151952AP2 domain
78722RNA pseudouridylate synthase
11131236Histone deacetylase domain
22Glycosyltransferase family 10 (fucosyltransferase) C-term
224POT family
1449PWWP domain
18232970SET domain
75214Isochorismatase family
45413Permease family
3238Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
112Sucrose synthase
3249XPG I-region
1214Acetokinase family
65920DNA photolyase
112Nitroreductase family
1214Cytosol aminopeptidase family, catalytic domain
11617Sulfatase
1126,7-dimethyl-8-ribityllumazine synthase
2226Ribosomal protein S16
54413Acyl CoA binding protein
33410Cullin family
2226Elongation factor TS
33410FAD binding domain
246O-methyltransferase domain
1671336EamA-like transporter family
98926ThiF family
1113Ribosomal family S4e
112Sec-independent protein translocase protein (TatC)
76922Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
11Involucrin repeat
68418Ammonium Transporter Family
43411Sulfate permease family
33410MATH domain
43411Uncharacterized protein family UPF0004
1113Dehydratase family
3238Transaldolase/Fructose-6-phosphate aldolase
56718Mechanosensitive ion channel
2215GTP cyclohydrolase II
11133,4-dihydroxy-2-butanone 4-phosphate synthase
2349Adaptor complexes medium subunit family
94720Exonuclease
33Glycosyl hydrolase family 3 N terminal domain
1113Ribosomal protein L44
34310Sodium:sulfate symporter transmembrane region
1113DNA-dependent RNA polymerase
2136FAD binding domain in molybdopterin dehydrogenase
11Peptidase S7, Flavivirus NS3 serine protease
1113Glycosyl transferase family 4
1113HCO3- transporter family
1427Nucleosome assembly protein (NAP)
38617Synaptobrevin
1113GMP synthase C terminal domain
11Phage lysozyme
4239Adenosine/AMP deaminase
33Barwin family
42511Oxidoreductase FAD-binding domain
1225Thioesterase domain
2125Histidine biosynthesis protein
2327Glycosyltransferase family 20
1326UDP-glucose/GDP-mannose dehydrogenase family, central domain
1113DNA gyrase B subunit, carboxyl terminus
1113Carbamoyl-phosphate synthase small chain, CPSase domain
134PAS fold
112
44412Probable molybdopterin binding domain
44412Sec1 family
1225GDP dissociation inhibitor
311317Sodium/hydrogen exchanger family
2125RNA polymerase Rpb3/RpoA insert domain
3227Inward rectifier potassium channel transmembrane domain
33410Initiation factor 2 subunit family
22PQQ enzyme repeat
1124Electron transfer flavoprotein domain
1113Uricase
1113Ribosomal S3Ae family
2226Ribosomal L27 protein
44210GTP1/OBG
1124Gamma-glutamyltranspeptidase
112Ribosomal L40e family
2327GrpE
2428TatD related DNase
2349Inhibitor of apoptosis-promoting Bax1
1113Eukaryotic DNA topoisomerase I, catalytic core
112NusB family
2226Dynamin central region
2136-O-methylguanine DNA methyltransferase, DNA binding domain
617Bacteriorhodopsin-like protein
3137Carboxyl transferase domain
76619UbiA prenyltransferase family
3317Endoribonuclease L-PSP
2327SecA preprotein cross-linking domain
1214Phosphorylase superfamily
3249Cys/Met metabolism PLP-dependent enzyme
42814Glycosyl hydrolases family 31
1113NADH ubiquinone oxidoreductase, 20 Kd subunit
2323ABC-2 type transporter
43310Amino-transferase class IV
55414CDP-alcohol phosphatidyltransferase
11Calpain large subunit, domain III
3339ATP dependent DNA ligase domain
1113FMN-dependent dehydrogenase
1214Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
23163-beta hydroxysteroid dehydrogenase/isomerase family
1113Glycosyl hydrolases family 38 N-terminal domain
2327Nitrite and sulphite reductase 4Fe-4S domain
2316Magnesium chelatase, subunit ChlI
11Hint module
1113Presenilin
1315Copper type II ascorbate-dependent monooxygenase, N-terminal domain
1113Ribosomal protein S18
2226Ubiquitin carboxyl-terminal hydrolase, family 1
213
1113Ribosomal protein S19e
1113Ribosomal protein S6e
11Receptor family ligand binding region
43411Transcription factor S-II (TFIIS)
2237Omp85 superfamily domain
123emp24/gp25L/p24 family/GOLD
3339NifU-like domain
2114Cyclin-dependent kinase regulatory subunit
123Asparaginase
1113Dihydrodipicolinate reductase, N-terminus
2226Semialdehyde dehydrogenase, NAD binding domain
123DNA mismatch repair protein, C-terminal domain
2226Dephospho-CoA kinase
3115MAPEG family
1113G10 protein
3126Heme oxygenase
112Succinate dehydrogenase/Fumarate reductase transmembrane subunit
1122-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
1113CD36 family
2237DNA topoisomerase
1225Elongation factor P (EF-P) OB domain
112Enhancer of rudimentary
2125Glucose inhibited division protein A
3328Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
11Peptidase family U32
2125RNA 3'-terminal phosphate cyclase
556163' exoribonuclease family, domain 1
1124tRNA-splicing ligase RtcB
112tRNA pseudouridine synthase D (TruD)
112Coenzyme A transferase
54615SPFH domain / Band 7 family
2259Cytidylyltransferase family
224Formamidopyrimidine-DNA glycosylase N-terminal domain
1427GDA1/CD39 (nucleoside phosphatase) family
22GNS1/SUR4 family
49215Bacterial-like globin
1113Hydroxymethylglutaryl-coenzyme A synthase N terminal
2439Inosine-uridine preferring nucleoside hydrolase
1113Ribosomal protein L21e
1113Ribosomal protein L36e
1113Ribosomal protein L6e
224Phosphatidylethanolamine-binding protein
112
2237RIO1 family
11Ribosomal protein S21
2226Tub family
1135Alanine racemase, N-terminal domain
34411Uncharacterized protein family UPF0016
22Putative RNA methylase family UPF0020
2226PP-loop family
1113Shwachman-Bodian-Diamond syndrome (SBDS) protein
112SNO glutamine amidotransferase family
1113Translation initiation factor 1A / IF-1
2349Copper amine oxidase, enzyme domain
3328Dihydroorotate dehydrogenase
314Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
4329GPR1/FUN34/yaaH family
1113Macrophage migration inhibitory factor (MIF)
11
324916S rRNA methyltransferase RsmB/F
2114RNA polymerase Rpb5, C-terminal domain
1113RNA polymerase Rpb6
34411RNA polymerase Rpb3/Rpb11 dimerisation domain
1113RNA polymerases N / 8 kDa subunit
2114Peptidyl-tRNA hydrolase
2226Ribosomal protein L17
1113Ribosomal protein L31
1113Ribosomal protein L31e
1113Ribosomal protein L34e
1113Ribosomal protein S28e
2226Ribosomal protein S8e
1135Shikimate kinase
2114Trehalase
2215Uncharacterized protein family UPF0029
46414Dihydrouridine synthase (Dus)
3238Uroporphyrinogen decarboxylase (URO-D)
75214ubiE/COQ5 methyltransferase family
35311NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
11Beta-eliminating lyase
1113Adenylate cyclase associated (CAP) N terminal
112Casein kinase II regulatory subunit
11Cytochrome c oxidase subunit Vb
44513Clathrin adaptor complex small chain
3227Coproporphyrinogen III oxidase
2338Dynein light chain type 1
123Ergosterol biosynthesis ERG4/ERG24 family
123DNA/RNA non-specific endonuclease
11Mur ligase family, catalytic domain
36211Formate/nitrite transporter
1113GTP cyclohydrolase I
112Glycine radical
33410HIT domain
123Indoleamine 2,3-dioxygenase
1113Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain
141217Oxysterol-binding protein
1135Phosphomannose isomerase type I
2226Protein prenyltransferase alpha subunit repeat
2226Photosystem I psaG / psaK
75719Pyridoxamine 5'-phosphate oxidase
1214Ribosomal protein L19
2226Ribosomal protein L24e
1113Ribosomal protein L35Ae
44614Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
1113Ribosomal protein S21e
1124Ribosomal protein S6
1113Ribosomal protein S7e
3339Translation initiation factor SUI1
2215Putative undecaprenyl diphosphate synthase
1214Carbohydrate kinase
1113Thioredoxin-like [2Fe-2S] ferredoxin
1113SAICAR synthetase
33Xylose isomerase-like TIM barrel
213Alanine dehydrogenase/PNT, C-terminal domain
63413Aldose 1-epimerase
1124Chorismate synthase
2215Cytochrome c/c1 heme lyase
331521FAD dependent oxidoreductase
112Formate--tetrahydrofolate ligase
1113Fibrillarin
22Glycosyl hydrolases family 8
2114Malate synthase
1113Orn/Lys/Arg decarboxylase, major domain
1113Ribosomal protein L19e
224Ribosomal protein L9, N-terminal domain
1113Ribosomal protein S24e
2125Ribosomal protein S26e
11Membrane-associating domain
1113Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold
11137,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
3115Phosphoenolpyruvate carboxykinase
1113Ribosomal protein L13e
2226Telomere recombination
178Glycosyl hydrolases family 35
2215CAP-Gly domain
2226
2136Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
3216DSBA-like thioredoxin domain
1247Pyruvate phosphate dikinase, PEP/pyruvate binding domain
1315Polypeptide deformylase
1135Pterin 4 alpha carbinolamine dehydratase
112mRNA capping enzyme, catalytic domain
77822OB-fold nucleic acid binding domain
3238Peptidase family S49
15201550Kelch motif
2215Ribonuclease HII
3710Pollen allergen
91726
1214FYVE zinc finger
11RIH domain
1125'-3' exonuclease, C-terminal SAM fold
2349Sec7 domain
552535NAD dependent epimerase/dehydratase family
1337Glycosyl hydrolase family 14
33Glycosyl hydrolase family 46
1214Porphobilinogen deaminase, dipyromethane cofactor binding domain
2125SIS domain
1113Helix-turn-helix
412420Phosphate transporter family
34916ARID/BRIGHT DNA binding domain
21113Collagen triple helix repeat (20 copies)
1113Clathrin propeller repeat
1113Topoisomerase DNA binding C4 zinc finger
991129JAB1/Mov34/MPN/PAD-1 ubiquitin protease
14121541PCI domain
11Ribbon-helix-helix protein, copG family
1225tRNA synthetases class I (C) catalytic domain
1247Oxidoreductase family, NAD-binding Rossmann fold
1225tRNA synthetases class II core domain (F)
1225tRNA synthetases class II (A)
66416Putative GTPase activating protein for Arf
26412tRNA pseudouridine synthase
3328ENTH domain
1214NF-X1 type zinc finger
16161749LSM domain
325R3H domain
74920Amidase
3339BAH domain
2226AN1-like Zinc finger
112Methyl-CpG binding domain
1113Hsp33 protein
34310Peptidase family M3
54413Peptidase family M1 domain
75921Peptidase family M41
44210Peptidase family M48
1225NHL repeat
11Plexin repeat
1113Acetohydroxy acid isomeroreductase, catalytic domain
1135Low molecular weight phosphotyrosine protein phosphatase
22D-mannose binding lectin
11MAGE family
11Leishmanolysin
2226Uncharacterized protein family (UPF0051)
2327Eukaryotic porin
22GRIP domain
2136Skp1 family, dimerisation domain
42511Cytidylyltransferase-like
11Pentapeptide repeats (8 copies)
1113Putative peptidoglycan binding domain
44311PUA domain
1124Class-II DAHP synthetase family
168428LysM domain
246PLAT/LH2 domain
78722S4 domain
2226PWI domain
54615IBR domain, a half RING-finger domain
1124Type I 3-dehydroquinase
134Shikimate / quinate 5-dehydrogenase
2882157Transmembrane amino acid transporter protein
1113Frataxin-like domain
1225GXGXG motif
1910FAD binding domain
1315V-type ATPase 116kDa subunit family
11Periplasmic binding protein
5128Glycosyl transferase family 8
1113Phosphoribosyl-AMP cyclohydrolase
1113Phosphoribosyl-ATP pyrophosphohydrolase
3339Phosphatidylinositol-4-phosphate 5-Kinase
1135Phosphoadenosine phosphosulfate reductase family
2226TruB family pseudouridylate synthase (N terminal domain)
2114Respiratory-chain NADH dehydrogenase 51 Kd subunit
2327ATP-NAD kinase
213Phosphate acetyl/butaryl transferase
3339Iron-sulphur cluster biosynthesis
22123Polysaccharide deacetylase
511824DHHC palmitoyltransferase
41611Glycosyl hydrolase family 47
2491952PPR repeat
112Adenosylmethionine decarboxylase
11Herpesvirus glycoprotein D/GG/GX domain
112GIY-YIG catalytic domain
56718CorA-like Mg2+ transporter protein
35513Cation efflux family
5101025Peptidase family M20/M25/M40
11Bacterial extracellular solute-binding protein
1310730ShK domain-like
871025Acyltransferase
109928MatE
710825DnaJ C terminal domain
1225Fumarylacetoacetate (FAA) hydrolase family
112Pyruvate ferredoxin/flavodoxin oxidoreductase
1225Spermine/spermidine synthase domain
106824FAD binding domain
1427Natural resistance-associated macrophage protein
85619PAP2 superfamily
3238Aminomethyltransferase folate-binding domain
1225MaoC like domain
3115Adenylylsulphate kinase
991028G-patch domain
47415Putative tRNA binding domain
33814GAF domain
2136-phosphofructo-2-kinase
1113NifU-like N terminal domain
1071229Flavin containing amine oxidoreductase
112AI-2E family transporter
2349Cyclin M transmembrane N-terminal domain
1258O-methyltransferase
1113Glycine cleavage H-protein
2327
1113Ribosomal protein S27a
77721Adaptin N terminal region
1113Protein phosphatase 2A regulatory B subunit (B56 family)
314Chitin binding Peritrophin-A domain
678213'-5' exonuclease
2226Flavin reductase like domain
1214Proline dehydrogenase
3159MutS domain I
34411Peptide methionine sulfoxide reductase
1113Hpt domain
1113Ribosomal protein L35
1124Choline/ethanolamine kinase
213ATP phosphoribosyltransferase
1236Phosphotransferase enzyme family
1427SelR domain
11Methylmalonyl-CoA mutase
1113Acyl-ACP thioesterase
22Chitin synthase
1225Conserved region in glutamate synthase
22264'-phosphopantetheinyl transferase superfamily
11Ribosomal protein S20
2215Peptidase C13 family
112Eukaryotic initiation factor 4E
11NAD-dependent DNA ligase adenylation domain
1113Ribosomal protein L32
112CobQ/CobB/MinD/ParA nucleotide binding domain
1113Myo-inositol-1-phosphate synthase
1326Macro domain
1225Ribosomal protein S27
2237Metalloenzyme superfamily
1113Diaminopimelate epimerase
213Proteolipid membrane potential modulator
1113SOR/SNZ family
2226Riboflavin kinase
8121131Rhomboid family
44Glycosyltransferase family 92
45312Sodium/calcium exchanger protein
3126Queuine tRNA-ribosyltransferase
2125UTP--glucose-1-phosphate uridylyltransferase
1113Transcriptional regulator
1