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PFAM Domains • Epicoccum nigrum cont 1108929 v1.0
Annotations/GenomesAscra1Boeex1Didex1Didma1Epini1Macan1Phomu1TotalAnnotation Description
PFAMs
10,53111,8458,43210,96711,1798,69211,52473,170
111147 transmembrane receptor (Secretin family)
42474043484243305ATPase family associated with various cellular activities (AAA)
55463939413741298ABC transporter
544444429ATP synthase alpha/beta family, nucleotide-binding domain
11EGF-like domain
16161416161417109Elongation factor Tu GTP binding domain
1112141112121284Helix-loop-helix DNA-binding domain
333333321Hsp20/alpha crystallin family
1012781171065Hsp70 protein
767777647KH domain
112SH2 domain
12132312122312107SH3 domain
1010101010101070Actin
9185919167918218Ankyrin repeat
128354326PAN domain
788888855ADP-ribosylation factor family
16161117151016101Eukaryotic aspartyl protease
444444428Cyclic nucleotide-binding domain
22Cytochrome b(C-terminal)/b6/petD
11Cytochrome b/b6/petB
11111117Cytochrome c
121122110Double-stranded RNA binding motif
22173218246EF hand
21144Fe-4S binding domain
122122212Fibronectin type III domain
11111117Globin
1110121414131286Glutathione S-transferase, C-terminal domain
11111117Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
557469642Homeodomain
454434428lactate/malate dehydrogenase, NAD binding domain
544534530Myosin head (motor domain)
76109841011067486636Cytochrome P450
122136111128157121122897Protein kinase domain
1412151312161395Pyridine nucleotide-disulphide oxidoreductase
25252325262325172Ras family
30272626262427186Response regulator receiver domain
243836127RNase H
51515853495850370RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
21012Reverse transcriptase (RNA-dependent DNA polymerase)
433443425Copper/zinc superoxide dismutase (SODC)
322222215Iron/manganese superoxide dismutases, alpha-hairpin domain
13176141781287Subtilase family
8011068828182104607Sugar (and other) transporter
1415121414131597Thioredoxin
234333422Trypsin
444444428Tubulin/FtsZ family, GTPase domain
1211319von Willebrand factor type A domain
19255916216328231Zinc finger, C2H2 type
445766523132Zinc finger, C3HC4 type (RING finger)
724756334Zinc knuckle
222322215Protein-tyrosine phosphatase
106138102116120112130824short chain dehydrogenase
57675957605466420Zinc-binding dehydrogenase
665565538Thiolase, N-terminal domain
15101115178884Beta-ketoacyl synthase, N-terminal domain
5364565342Fe-2S iron-sulfur cluster binding domain
11Papain family cysteine protease
11111117Enolase, C-terminal TIM barrel domain
11Cytochrome C and Quinol oxidase polypeptide I
11Cytochrome C oxidase subunit II, periplasmic domain
1010910981066Glutamine amidotransferase class-I
910101010101069TCP-1/cpn60 chaperonin family
11ATP synthase A chain
233333320Glutamine synthetase, catalytic domain
222222214Triosephosphate isomerase
17191518201522126E1-E2 ATPase
899888757Core histone H2A/H2B/H3/H4
33Bacterial regulatory helix-turn-helix protein, lysR family
12115Copper binding proteins, plastocyanin/azurin family
586677645Alpha amylase, catalytic domain
222221213Phorbol esters/diacylglycerol binding domain (C1 domain)
887596750Bacterial transferase hexapeptide (six repeats)
553553531tRNA synthetases class I (I, L, M and V)
887887955Cyclin, N-terminal domain
29392833293132221Carboxylesterase family
444444428DNA polymerase family B
444444428ATP synthase subunit C
912991071066Peroxidase
1218111213121492Beta-lactamase
333342321C-5 cytosine-specific DNA methylase
22NADH dehydrogenase
22232723242823170Calcineurin-like phosphoesterase
20231316171320122Cellulase (glycosyl hydrolase family 5)
787787751tRNA synthetases class II (D, K and N)
38384039404241278Mitochondrial carrier protein
11recA bacterial DNA recombination protein
19171517191919125Aminotransferase class I and II
559449440Phosphoribosyl transferase domain
1212121212111283Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
11111117Phosphoglycerate kinase
222222214Ribosomal protein S4/S9 N-terminal domain
222212213Ribosomal protein S12/S23
11111117Bacterial regulatory helix-turn-helix proteins, AraC family
1111116Chaperonin 10 Kd subunit
1011121011111176C2 domain
912181010181188PH domain
12191115161116100bZIP transcription factor
26351924202025169Aldehyde dehydrogenase family
1032581651291971972491,298Fungal Zn(2)-Cys(6) binuclear cluster domain
21232623242325165Cytochrome b5-like Heme/Steroid binding domain
444445631Oxidoreductase molybdopterin binding domain
14171714141520111Oxidoreductase NAD-binding domain
25282526282422178SNF2 family N-terminal domain
222222214Ribosomal protein S7p/S5e
23252324262326170Ubiquitin-conjugating enzyme
787777851Isocitrate/isopropylmalate dehydrogenase
222222214Ribosomal Proteins L2, RNA binding domain
21111118Hsp90 protein
222222214Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
11111117Dihydrofolate reductase
386678341Chitin recognition protein
435443528Cysteine-rich secretory protein family
1111116Ribosomal protein S3, C-terminal domain
8656761149Cupin
222222214Annexin
222122213Eukaryotic-type carbonic anhydrase
11111117Chalcone and stilbene synthases, N-terminal domain
44Bacterial regulatory proteins, luxR family
4333334232-oxoacid dehydrogenases acyltransferase (catalytic domain)
767887952Catalase
11111117Disintegrin
31013111635UDP-glucoronosyl and UDP-glucosyl transferase
79710710858Aminotransferase class-III
222222214Ribosomal protein S19
11111117DNA gyrase B
465654737Thiamine pyrophosphate enzyme, central domain
443333424Lyase
322222215Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
11111139Sodium:neurotransmitter symporter family
11111117Adenylate and Guanylate cyclase catalytic domain
11111117ATP synthase delta (OSCP) subunit
11111117Orotidine 5'-phosphate decarboxylase / HUMPS family
11111117Indole-3-glycerol phosphate synthase
112Aromatic amino acid lyase
11111117Pyruvate kinase, barrel domain
101110109101070Kinesin motor domain
27322933313029211DnaJ domain
1114141414141394Proteasome subunit
8686681052Major intrinsic protein
11111117ATP synthase
454424427Glycosyl hydrolase family 1
111111173'5'-cyclic nucleotide phosphodiesterase
11111117Profilin
121221211Ribosomal protein L22p/L17e
222222214Ribosomal protein L14p/L23e
1010121010101173Ubiquitin family
355556534Cofilin/tropomyosin-type actin-binding protein
33233231914-3-3 protein
335237326Alkaline phosphatase
9989981062Zinc carboxypeptidase
33402533323341237Aldo/keto reductase family
78146913663Myb-like DNA-binding domain
444444428Forkhead domain
342442322Glycosyl hydrolases family 32 N-terminal domain
221221212Ribosomal protein L16p/L10e
133233318Ribosomal protein S14p/S29e
655555536FKBP-type peptidyl-prolyl cis-trans isomerase
11111117Glutathione peroxidase
112
6786681051Flavodoxin
11111117Calreticulin family
16221117201116113Common central domain of tyrosinase
11979971062Aminotransferase class-V
11111117Ribonucleotide reductase, small chain
45454643423942302DEAD/DEAH box helicase
72737770747169506Helicase conserved C-terminal domain
11111117EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
222222214Ribosomal protein L23
11111117Pyridoxal-dependent decarboxylase, C-terminal sheet domain
1212219Ribosomal protein L5
676666643Pyridoxal-dependent decarboxylase conserved domain
542342424Citrate synthase, C-terminal domain
555555535GHMP kinases N terminal domain
777767748Biotin carboxylase, N-terminal domain
11111117Tryptophan synthase alpha chain
1114121413111388Pyridoxal-phosphate dependent enzyme
15151615161718112NUDIX domain
656667743pfkB family carbohydrate kinase
111513106101479Glycosyl hydrolases family 28
11711061743Luciferase-like monooxygenase
222222214Ribosomal protein L3
222222214Ribosomal protein L11, RNA binding domain
16181313131315101Histidine phosphatase superfamily (branch 1)
11111117Thymidylate synthase
11111117Lipoxygenase
444444428ATP synthase alpha/beta chain, C terminal domain
553543530Calponin homology (CH) domain
325235222Glutamine amidotransferases class-II
222222214Ribosomal protein S15
22'Cold-shock' DNA-binding domain
11111117Thaumatin family
122222213Fructose-1-6-bisphosphatase, N-terminal domain
11111117Ribonucleotide reductase, all-alpha domain
222222214Ribosomal protein S2
212212111SRF-type transcription factor (DNA-binding and dimerisation domain)
667576744GATA zinc finger
17173319184118163Amino acid permease
885785647Prolyl oligopeptidase family
332333320Ribosomal protein L30p/L7e
1312141412131391Histidine phosphatase superfamily (branch 2)
11111117Respiratory-chain NADH dehydrogenase, 30 Kd subunit
454446633Aconitase family (aconitate hydratase)
543665433Glycosyl hydrolase family 10
215326322Glycosyl hydrolases family 17
222222214Ribosomal protein S5, N-terminal domain
11111117Nucleoside diphosphate kinase
211116Tetraspanin family
221221212Ribosomal protein S10p/S20e
574653636Arrestin (or S-antigen), N-terminal domain
11111117Phosphoglucose isomerase
11111117Carbohydrate phosphorylase
11111117SecY translocase
11111117Respiratory-chain NADH dehydrogenase, 49 Kd subunit
222222214Ribosomal protein L6
354354327Polyprenyl synthetase
555555434Hexokinase
11154101151167Dynamin family
11111117Transcription factor TFIID (or TATA-binding protein, TBP)
678557745Rieske [2Fe-2S] domain
11Bacterial regulatory proteins, lacI family
1214Phytochrome region
44Proton-conducting membrane transporter
998989860Biotin-requiring enzyme
1111116Phosphofructokinase
222222214Ribosomal protein S17
221211211Hydroxymethylglutaryl-coenzyme A reductase
433333322FGGY family of carbohydrate kinases, N-terminal domain
1111116Sodium:dicarboxylate symporter family
111311111191278Enoyl-CoA hydratase/isomerase
222212213Ribosomal protein S9/S16
222222214Transcription factor TFIIB repeat
677986750Cytidine and deoxycytidylate deaminase zinc-binding region
11111229Molybdopterin oxidoreductase
445665737Chromo (CHRromatin Organisation MOdifier) domain
333343322Phosphatidylinositol-specific phospholipase C, Y domain
443453427Phosphatidylinositol-specific phospholipase C, X domain
7117888958D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
321222214Malic enzyme, N-terminal domain
11Bacterial regulatory proteins, gntR family
2222222146-phosphogluconate dehydrogenase, C-terminal domain
8981111111371Multicopper oxidase
1011121311111179WW domain
221121211Ribosomal RNA adenine dimethylase
212222213Yeast PIR protein repeat
100104106110102144116782WD domain, G-beta repeat
455564534Heavy-metal-associated domain
533344325Adenylate kinase
332332319Phosphoglucomutase/phosphomannomutase, C-terminal domain
222222214Ribosomal protein S8
221221212Ribosomal protein S11
444445429LIM domain
11Matrixin
232231215Regulator of chromosome condensation (RCC1) repeat
122222213Ribosomal protein S13/S18
11NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
222222214chorismate binding enzyme
33444442660s Acidic ribosomal protein
444334426Prenyltransferase and squalene oxidase repeat
435435327Protein kinase C terminal domain
11111117Single-strand binding protein family
112Type II/IV secretion system protein
11111117S-adenosylmethionine synthetase, N-terminal domain
777777749Bromodomain
2121Bacterial regulatory proteins, tetR family
19151513131413102Acyl-CoA dehydrogenase, C-terminal domain
14181517151414107Ubiquitin carboxyl-terminal hydrolase
11111117Ribosomal protein L36
343332220Ribonuclease T2 family
333333321HSF-type DNA-binding
222222214SRP54-type protein, GTPase domain
21111118Urease alpha-subunit, N-terminal domain
12991210111174Serine carboxypeptidase
788888855Phosphatidylinositol 3- and 4-kinase
363434427Transketolase, thiamine diphosphate binding domain
323523321Glycosyl hydrolases family 11
455555534Inositol monophosphatase family
444444428Glutaredoxin
223224217Isocitrate lyase family
222222214Serine hydroxymethyltransferase
554544532Iron-containing alcohol dehydrogenase
222222214Ribosomal protein L10
443433425KOW motif
11111117Ribosomal protein L34
112Negative factor, (F-Protein) or Nef
1113Ribosomal protein L33
332332319RF-1 domain
444441425Sodium:solute symporter family
11111117Imidazoleglycerol-phosphate dehydratase
1111116DNA polymerase family A
11111117IMP dehydrogenase / GMP reductase domain
11111117Glucose-6-phosphate dehydrogenase, NAD binding domain
777777749Protein phosphatase 2C
333343322Nucleotidyl transferase
321313316Carbonic anhydrase
341321317Phosphoribulokinase / Uridine kinase family
33Transcriptional regulatory protein, C terminal
8979119962Fatty acid desaturase
666666642MutS domain V
11111117Delta-aminolevulinic acid dehydratase
354444428Arginase family
666666642MCM P-loop domain
332332319Squalene/phytoene synthase
516Bacterial extracellular solute-binding proteins, family 5 Middle
21126Bacterial extracellular solute-binding proteins, family 3
8999109862FHA domain
46473846464144308AMP-binding enzyme
455545533G-protein alpha subunit
878967752HMG (high mobility group) box
11NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
11Cytochrome c oxidase subunit III
24242223252223163His Kinase A (phospho-acceptor) domain
223223216Armadillo/beta-catenin-like repeat
12112513113915126Tetratricopeptide repeat
134133217Ion transport protein
11111117DNA gyrase/topoisomerase IV, subunit A
88Binding-protein-dependent transport system inner membrane component
991271112969BRCA1 C Terminus (BRCT) domain
465555434Glycosyl transferases group 1
223224217Glycosyl transferase family 2
333332320SAM domain (Sterile alpha motif)
11111117linker histone H1 and H5 family
11111117Ribosomal protein L7/L12 C-terminal domain
10121167111370Pectate lyase
15331215ribonuclease
21111118Urease, gamma subunit
444444428CoA-ligase
20201123231216125Phosphopantetheine attachment site
333333321Formyl transferase
9119121091171Metallopeptidase family M24
12131114234Leucine Rich Repeat
1212388113511127alpha/beta hydrolase fold
333333321RNA polymerase Rpb2, domain 6
444444428PB1 domain
222222214Staphylococcal nuclease homologue
1212121212111283Rab-GTPase-TBC domain
11111117Tudor domain
11111117WH1 domain
554555635Zinc finger, ZZ type
333333321HRDC domain
8797710755CBS domain
222222214Ribosomal protein L13
222222214Ribosomal protein L4/L1 family
11111117Clp protease
653553532S1 RNA binding domain
11111117HIUase/Transthyretin family
558756743AhpC/TSA family
444444428tRNA synthetases class I (W and Y)
11111117UvrD/REP helicase N-terminal domain
91059104855Rhodanese-like domain
322222215Universal stress protein family
26323536364533243Acetyltransferase (GNAT) family
11111117SecE/Sec61-gamma subunits of protein translocation complex
11111117C-terminal regulatory domain of Threonine dehydratase
422222216AIR synthase related protein, N-terminal domain
778778751tRNA synthetase class II core domain (G, H, P, S and T)
332222216SpoU rRNA Methylase family
11Phage integrase family
222222214Tetrapyrrole (Corrin/Porphyrin) Methylases
11111117Glycosyl transferase family, a/b domain
21111118PDZ domain
6661067950Class II Aldolase and Adducin N-terminal domain
444344427Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
555555535Fes/CIP4, and EFC/F-BAR homology domain
335215322IQ calmodulin-binding motif
222222214Phosphoinositide 3-kinase family, accessory domain (PIK domain)
236235324Phospholipase D Active site motif
441341421Regulator of G protein signaling domain
333333321GTPase-activator protein for Ras-like GTPase
444444428RasGEF domain
444444428RasGEF N-terminal motif
877888753RhoGAP domain
666666642RhoGEF domain
222232215SPRY domain
333333321RNA polymerase Rpb1, domain 2
1111116Guanylate kinase
444444428Gelsolin repeat
7696610751UBA/TS-N domain
1313141112171393PHD-finger
11111117GGL domain
555555434HECT-domain (ubiquitin-transferase)
113113111Helix-hairpin-helix motif
1111116MSP (Major sperm protein) domain
335224221Ribonuclease III domain
552452528Region in Clathrin and VPS
222222214RanBP1 domain
112212211PPIC-type PPIASE domain
11111117Zn-finger in Ran binding protein and others
78158914869Zinc finger C-x8-C-x5-C-x3-H type (and similar)
11B-box zinc finger
333333321Poly(ADP-ribose) polymerase catalytic domain
11111117Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
17235121216117211F-box domain
11111117Elongation factor 1 gamma, conserved domain
333333321Calpain family cysteine protease
222222214Copper fist DNA binding domain
555565536CRAL/TRIO domain
29391037341120180BTB/POZ domain
11111117Inhibitor of Apoptosis domain
444444428Voltage gated chloride channel
362254325Caspase domain
63148511552GDSL-like Lipase/Acylhydrolase
211212211Poly-adenylate binding protein, unique domain
1113POLO box duplicated region
21191619191519128ABC transporter transmembrane region
3249Integrase core domain
6886671152FAD binding domain
455586538Condensation domain
11111117S-adenosyl-L-homocysteine hydrolase, NAD binding domain
21111118HAMP domain
222222214ribosomal L5P family C-terminus
555555535Insulinase (Peptidase family M16)
433333322Dehydrogenase E1 component
11111117Lumazine binding domain
666666642Elongation factor G C-terminus
444344427HMGL-like
234334322DnaJ central domain
333333321Starch binding domain
332332319Ribosomal protein L1p/L10e family
7887891057Cation transporting ATPase, C-terminus
8998991163Cation transporter/ATPase, N-terminus
12111118dUTPase
454446633Aconitase C-terminal domain
343335324Amino acid kinase family
21111118N-(5'phosphoribosyl)anthranilate (PRA) isomerase
1481115168779Acyl transferase domain
21111118Urease beta subunit
11Bacterial flagellin C-terminal helical region
785867748Dihydrodipicolinate synthetase family
13153116163419144haloacid dehalogenase-like hydrolase
777666645Glycosyl hydrolases family 2
81712111571383Glycosyl hydrolases family 18
11111117Proliferating cell nuclear antigen, N-terminal domain
111115Translation initiation factor IF-3, C-terminal domain
1111116Acylphosphatase
11111117Adenylosuccinate synthetase
322332318Asparaginase, N-terminal
11111117Peptidase S24-like
12111129Inorganic pyrophosphatase
15139161491490Glycosyl hydrolases family 16
333333321Glycosyl hydrolases family 15
1012710891066NADH:flavin oxidoreductase / NADH oxidase family
6445544323-hydroxyacyl-CoA dehydrogenase, C-terminal domain
333434323Glycosyl hydrolase family 20, catalytic domain
775674743HhH-GPD superfamily base excision DNA repair protein
11111117AIR carboxylase
25361730312328190GMC oxidoreductase
333333321Asparagine synthase
885888752Fungal cellulose binding domain
666666642Septin
11111117EF-1 guanine nucleotide exchange domain
11111117Homoserine dehydrogenase
561871937Flavin-binding monooxygenase-like
333333321tRNA synthetases class I (E and Q), catalytic domain
222222214tRNA synthetases class I (R)
454444429XPG N-terminal domain
6149117101168Metallo-beta-lactamase superfamily
1121117F5/8 type C domain
222222214Choline/Carnitine o-acyltransferase
22221211Putative esterase
11111117Ferrochelatase
222222214Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
11111117Arginosuccinate synthase
11111117Electron transfer flavoprotein FAD-binding domain
333333321RNB domain
787568647Dioxygenase
332232318CNH domain
321222214Diacylglycerol kinase catalytic domain
788888855Dual specificity phosphatase, catalytic domain
123223215P21-Rho-binding domain
1212121312121285PX domain
222222214Ras association (RalGDS/AF-6) domain
666666642UBX domain
444444428VHS domain
11111117Phosphoinositide 3-kinase C2
322222215DAHP synthetase I family
111291111121278Carbon-nitrogen hydrolase
232442320N-acetyltransferase
11111117Prephenate dehydratase
335335325Syntaxin
345445429Pumilio-family RNA binding repeat
667667644Histone-like transcription factor (CBF/NF-Y) and archaeal histone
11111117Pterin binding enzyme
222222214ER lumen protein retaining receptor
222222214tRNA N6-adenosine threonylcarbamoyltransferase
11111117Histidinol dehydrogenase
454444429impB/mucB/samB family
112
1111116Ribosomal L15
331331317Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
11111117Ribosomal L28 family
1111116Ribosomal L29 protein
1111116Ribosomal L39 protein
11111117Ribosomal S17
11111117Ribulose-phosphate 3 epimerase family
11111117Translationally controlled tumour protein
333233320Glycosyl hydrolase family 7
3422415Ring hydroxylating alpha subunit (catalytic domain)
21111118RNA pseudouridylate synthase
444444428Histone deacetylase domain
108881181265POT family