PFAM Domains • Trichosporon oleaginosus IBC0246 v1.0
Annotations/GenomesCryne_H99_1Cryne_JEC21_1Cryvi1Diocr1Treme1Triol1TotalAnnotation Description
PFAMs
5,7325,7905,5639,5565,5656,30938,515
112157 transmembrane receptor (rhodopsin family)
313134573634223ATPase family associated with various cellular activities (AAA)
343338833437259ABC transporter
44454425ATP synthase alpha/beta family, nucleotide-binding domain
21115EGF-like domain
13131319131384Elongation factor Tu GTP binding domain
998128955Helix-loop-helix DNA-binding domain
89897748Hsp70 protein
888117850KH domain
1113SH2 domain
222019292223135SH3 domain
10129199968Actin
181516331519116Ankyrin repeat
111214PAN domain
887128851ADP-ribosylation factor family
8891191863Eukaryotic aspartyl protease
33333318Cyclic nucleotide-binding domain
112Cytochrome b/b6/petB
1111116Cytochrome c
22116Double-stranded RNA binding motif
16161422151699EF hand
221411114Fe-4S binding domain
11125Fibronectin type III domain
11114Globin
864132740Glutathione S-transferase, C-terminal domain
22231212Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
65484431Homeodomain
112Laminin EGF domain
22262216lactate/malate dehydrogenase, NAD binding domain
44577633Myosin head (motor domain)
55162281672Cytochrome P450
89961041669695646Protein kinase domain
11101216111575Pyridine nucleotide-disulphide oxidoreductase
232523312423149Ras family
1010221791381Response regulator receiver domain
1121229RNase H
626552815955374RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
81220Reverse transcriptase (RNA-dependent DNA polymerase)
11121410Copper/zinc superoxide dismutase (SODC)
1112117Iron/manganese superoxide dismutases, alpha-hairpin domain
33363220Subtilase family
625729742539286Sugar (and other) transporter
81081281056Thioredoxin
44474427Tubulin/FtsZ family, GTPase domain
2161414von Willebrand factor type A domain
242624392828169Zinc finger, C2H2 type
323633603741239Zinc finger, C3HC4 type (RING finger)
11109201507207Zinc knuckle
22232213Protein-tyrosine phosphatase
353438853449275short chain dehydrogenase
252827541736187Zinc-binding dehydrogenase
33453826Thiolase, N-terminal domain
1112117Beta-ketoacyl synthase, N-terminal domain
355744282Fe-2S iron-sulfur cluster binding domain
2311119Enolase, C-terminal TIM barrel domain
1236Cytochrome C and Quinol oxidase polypeptide I
112Cytochrome C oxidase subunit II, periplasmic domain
778118748Glutamine amidotransferase class-I
10101013101063TCP-1/cpn60 chaperonin family
213ATP synthase A chain
22222212Glutamine synthetase, catalytic domain
1111116Triosephosphate isomerase
1010111691167E1-E2 ATPase
88816111263Core histone H2A/H2B/H3/H4
9119209765Alpha amylase, catalytic domain
33343420Phorbol esters/diacylglycerol binding domain (C1 domain)
995158652Bacterial transferase hexapeptide (six repeats)
33363321tRNA synthetases class I (I, L, M and V)
998149958Cyclin, N-terminal domain
458651139Carboxylesterase family
44464426DNA polymerase family B
52333319ATP synthase subunit C
1225Legume lectin domain
22242315Peroxidase
21721132Beta-lactamase
123C-5 cytosine-specific DNA methylase
112NADH dehydrogenase
11Nitrogenase component 1 type Oxidoreductase
192017321816122Calcineurin-like phosphoesterase
558116439Cellulase (glycosyl hydrolase family 5)
66695537tRNA synthetases class II (D, K and N)
343432573336226Mitochondrial carrier protein
161516221616101Aminotransferase class I and II
776116744Phosphoribosyl transferase domain
13131218121280Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1211117Phosphoglycerate kinase
22222212Ribosomal protein S4/S9 N-terminal domain
22232213Ribosomal protein S12/S23
112116Chaperonin 10 Kd subunit
12121117121478C2 domain
16161021171696PH domain
79795643bZIP transcription factor
1414101591981Aldehyde dehydrogenase family
77775810153102468Fungal Zn(2)-Cys(6) binuclear cluster domain
192018321723129Cytochrome b5-like Heme/Steroid binding domain
22Oxidoreductase molybdopterin binding domain
778105946Oxidoreductase NAD-binding domain
212119351920135SNF2 family N-terminal domain
21242213Ribosomal protein S7p/S5e
191916282019121Ubiquitin-conjugating enzyme
786115643Isocitrate/isopropylmalate dehydrogenase
22232213Ribosomal Proteins L2, RNA binding domain
22242214Hsp90 protein
22232213Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1112117Dihydrofolate reductase
21263519Cysteine-rich secretory protein family
1111116Ribosomal protein S3, C-terminal domain
1236Cupin
1212118Annexin
224Eukaryotic-type carbonic anhydrase
11Chalcone and stilbene synthases, N-terminal domain
332533192-oxoacid dehydrogenases acyltransferase (catalytic domain)
45331218Catalase
2212119Disintegrin
3811UDP-glucoronosyl and UDP-glucosyl transferase
8951061048Aminotransferase class-III
22242214Ribosomal protein S19
1112117DNA gyrase B
22432417Thiamine pyrophosphate enzyme, central domain
33353320Lyase
22222212Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
213Sodium:neurotransmitter symporter family
1112117Adenylate and Guanylate cyclase catalytic domain
1112117ATP synthase delta (OSCP) subunit
1111116Orotidine 5'-phosphate decarboxylase / HUMPS family
1112117Indole-3-glycerol phosphate synthase
11Aromatic amino acid lyase
1211117Pyruvate kinase, barrel domain
101091312963Kinesin motor domain
232624352523156DnaJ domain
14141419141489Proteasome subunit
11271315Major intrinsic protein
1112117ATP synthase
23128Glycosyl hydrolase family 1
1111153'5'-cyclic nucleotide phosphodiesterase
11Protease inhibitor/seed storage/LTP family
1111116Profilin
1121117Ribosomal protein L22p/L17e
22232213Ribosomal protein L14p/L23e
12141117101074Ubiquitin family
56585534Cofilin/tropomyosin-type actin-binding protein
111211714-3-3 protein
12317Alkaline phosphatase
1111116Zinc carboxypeptidase
211925482320156Aldo/keto reductase family
78512111154Myb-like DNA-binding domain
65374429Forkhead domain
111227Glycosyl hydrolases family 32 N-terminal domain
1111116Ribosomal protein L16p/L10e
22252215Ribosomal protein S14p/S29e
33373322FKBP-type peptidyl-prolyl cis-trans isomerase
22232213Glutathione peroxidase
1112117
11Dehydrin
55444729Flavodoxin
11Tropomyosin
1112117Calreticulin family
56784434Aminotransferase class-V
22132212Ribonucleotide reductase, small chain
414040623738258DEAD/DEAH box helicase
7172661096566449Helicase conserved C-terminal domain
1112117EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
22142213Ribosomal protein L23
1112139Pyridoxal-dependent decarboxylase, C-terminal sheet domain
22122110Ribosomal protein L5
34485428Pyridoxal-dependent decarboxylase conserved domain
1111116Citrate synthase, C-terminal domain
57484432GHMP kinases N terminal domain
65565734Biotin carboxylase, N-terminal domain
1111116Tryptophan synthase alpha chain
8991161154Pyridoxal-phosphate dependent enzyme
9101222101477NUDIX domain
653114635pfkB family carbohydrate kinase
1156114Glycosyl hydrolases family 28
22232213Ribosomal protein L3
22242214Ribosomal protein L11, RNA binding domain
9972491068Histidine phosphatase superfamily (branch 1)
1111116Thymidylate synthase
44454425ATP synthase alpha/beta chain, C terminal domain
34454424Calponin homology (CH) domain
44594430Glutamine amidotransferases class-II
22232213Ribosomal protein S15
2223312Thaumatin family
1112117Fructose-1-6-bisphosphatase, N-terminal domain
1111116Ribonucleotide reductase, all-alpha domain
22232213Ribosomal protein S2
22232213SRF-type transcription factor (DNA-binding and dimerisation domain)
12109169965GATA zinc finger
161491753697Amino acid permease
45342220Prolyl oligopeptidase family
1113219Ribosomal protein L30p/L7e
56475532Histidine phosphatase superfamily (branch 2)
1111116Respiratory-chain NADH dehydrogenase, 30 Kd subunit
55554428Aconitase family (aconitate hydratase)
112Glycosyl hydrolase family 10
111115Glycosyl hydrolases family 17
22221211Ribosomal protein S5, N-terminal domain
22131211Nucleoside diphosphate kinase
111115Tetraspanin family
2212119Ribosomal protein S10p/S20e
22232213Arrestin (or S-antigen), N-terminal domain
1112117Phosphoglucose isomerase
1112117Carbohydrate phosphorylase
1121117SecY translocase
1112117Respiratory-chain NADH dehydrogenase, 49 Kd subunit
22222212Ribosomal protein L6
33353320Polyprenyl synthetase
22232213Hexokinase
33393324Dynamin family
1112117Transcription factor TFIID (or TATA-binding protein, TBP)
33454322Rieske [2Fe-2S] domain
22Bacterial regulatory proteins, lacI family
1111116Phytochrome region
426Proton-conducting membrane transporter
876106946Biotin-requiring enzyme
1112117Phosphofructokinase
22232213Ribosomal protein S17
1111116Hydroxymethylglutaryl-coenzyme A reductase
34352421FGGY family of carbohydrate kinases, N-terminal domain
22Sodium:dicarboxylate symporter family
5541041442Enoyl-CoA hydratase/isomerase
22232213Ribosomal protein S9/S16
23231213Transcription factor TFIIB repeat
1010454841Cytidine and deoxycytidylate deaminase zinc-binding region
1122118Molybdopterin oxidoreductase
883827559Chromo (CHRromatin Organisation MOdifier) domain
1112128Phosphatidylinositol-specific phospholipase C, Y domain
21141413Phosphatidylinositol-specific phospholipase C, X domain
9106109751D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
33242216Malic enzyme, N-terminal domain
11122186-phosphogluconate dehydrogenase, C-terminal domain
55214522Multicopper oxidase
7136148856WW domain
1122118Ribosomal RNA adenine dimethylase
1021049815897102661WD domain, G-beta repeat
11463318Heavy-metal-associated domain
33353320Adenylate kinase
11232211Phosphoglucomutase/phosphomannomutase, C-terminal domain
1121117Ribosomal protein S8
1111116Ribosomal protein S11
44484428LIM domain
1111228Regulator of chromosome condensation (RCC1) repeat
22222212Ribosomal protein S13/S18
22NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
22342215chorismate binding enzyme
3333331860s Acidic ribosomal protein
44574428Prenyltransferase and squalene oxidase repeat
44494429Protein kinase C terminal domain
1113129Single-strand binding protein family
1111116S-adenosylmethionine synthetase, N-terminal domain
101091691165Bromodomain
785771751Acyl-CoA dehydrogenase, C-terminal domain
14151424181499Ubiquitin carboxyl-terminal hydrolase
1112117Ribosomal protein L36
123Ribonuclease T2 family
44595532HSF-type DNA-binding
22242214SRP54-type protein, GTPase domain
1111116Urease alpha-subunit, N-terminal domain
77363329Serine carboxypeptidase
888128751Phosphatidylinositol 3- and 4-kinase
55252120Transketolase, thiamine diphosphate binding domain
33382322Inositol monophosphatase family
46464428Glutaredoxin
1112128Isocitrate lyase family
1112117Serine hydroxymethyltransferase
1111127Iron-containing alcohol dehydrogenase
22222212Ribosomal protein L10
44465528KOW motif
112116Ribosomal protein L34
11114Ribosomal protein L33
32253318RF-1 domain
111216Sodium:solute symporter family
1111116Imidazoleglycerol-phosphate dehydratase
1111116DNA polymerase family A
1111116IMP dehydrogenase / GMP reductase domain
1131118Glucose-6-phosphate dehydrogenase, NAD binding domain
556125538Protein phosphatase 2C
22242214Nucleotidyl transferase
22152517Carbonic anhydrase
1211218Phosphoribulokinase / Uridine kinase family
44565529Fatty acid desaturase
666116742MutS domain V
1112117Delta-aminolevulinic acid dehydratase
32111210Arginase family
66696639MCM P-loop domain
12232111Squalene/phytoene synthase
775107743FHA domain
213NADH-ubiquinone/plastoquinone oxidoreductase chain 6
910141683390AMP-binding enzyme
33353320G-protein alpha subunit
77786641HMG (high mobility group) box
11NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
1113Cytochrome c oxidase subunit III
77151471060His Kinase A (phospho-acceptor) domain
22442216Armadillo/beta-catenin-like repeat
222321251619126Tetratricopeptide repeat
33383424Ion transport protein
1112117DNA gyrase/topoisomerase IV, subunit A
76111510756BRCA1 C Terminus (BRCT) domain
777117645Glycosyl transferases group 1
22342215Glycosyl transferase family 2
1113SAM domain (Sterile alpha motif)
2212119linker histone H1 and H5 family
111115Ribosomal protein L7/L12 C-terminal domain
1111116Urease, gamma subunit
33373423CoA-ligase
23482221Phosphopantetheine attachment site
33253319Formyl transferase
1010101391163Metallopeptidase family M24
171914271916112Leucine Rich Repeat
9101023122185alpha/beta hydrolase fold
33443320RNA polymerase Rpb2, domain 6
34363322PB1 domain
22232213Staphylococcal nuclease homologue
91091881064Rab-GTPase-TBC domain
1112117Tudor domain
1111116WH1 domain
34444322Zinc finger, ZZ type
22142112HRDC domain
775117845CBS domain
22232213Ribosomal protein L13
22222212Ribosomal protein L4/L1 family
1111116Clp protease
34374425S1 RNA binding domain
111115HIUase/Transthyretin family
33354321AhpC/TSA family
33454423tRNA synthetases class I (W and Y)
1112117UvrD/REP helicase N-terminal domain
44383527Rhodanese-like domain
23232214Universal stress protein family
181320581739165Acetyltransferase (GNAT) family
1111116SecE/Sec61-gamma subunits of protein translocation complex
1111116C-terminal regulatory domain of Threonine dehydratase
22242214AIR synthase related protein, N-terminal domain
66686638tRNA synthetase class II core domain (G, H, P, S and T)
123Phage integrase family
22242214Tetrapyrrole (Corrin/Porphyrin) Methylases
1111116Glycosyl transferase family, a/b domain
21141615Class II Aldolase and Adducin N-terminal domain
11Influenza non-structural protein (NS1)
12232212Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
55264325Fes/CIP4, and EFC/F-BAR homology domain
76233627IQ calmodulin-binding motif
22232213Phosphoinositide 3-kinase family, accessory domain (PIK domain)
45364426Phospholipase D Active site motif
1111116Regulator of G protein signaling domain
32334419GTPase-activator protein for Ras-like GTPase
33353320RasGEF domain
32333317RasGEF N-terminal motif
911818111067RhoGAP domain
1412917121175RhoGEF domain
33352319SPRY domain
33343319RNA polymerase Rpb1, domain 2
1112117Guanylate kinase
34243218Gelsolin repeat
81012147758UBA/TS-N domain
152017211317103PHD-finger
2114GGL domain
44464426HECT-domain (ubiquitin-transferase)
2212119Helix-hairpin-helix motif
1112117MSP (Major sperm protein) domain
554118437Ribonuclease III domain
22222212Region in Clathrin and VPS
33242317RanBP1 domain
1111116PPIC-type PPIASE domain
1243414Zn-finger in Ran binding protein and others
191715251419109Zinc finger C-x8-C-x5-C-x3-H type (and similar)
2125Poly(ADP-ribose) polymerase catalytic domain
1111116Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
2018163001931404F-box domain
1111116Elongation factor 1 gamma, conserved domain
112Calpain family cysteine protease
1112117Copper fist DNA binding domain
54795636CRAL/TRIO domain
512168436BTB/POZ domain
551317112980Ricin-type beta-trefoil lectin domain
1112117Inhibitor of Apoptosis domain
22232213Voltage gated chloride channel
22142213Caspase domain
33682426GDSL-like Lipase/Acylhydrolase
1111116Poly-adenylate binding protein, unique domain
1112117POLO box duplicated region
213NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
151418411916123ABC transporter transmembrane region
341320Integrase core domain
33453523FAD binding domain
1111116S-adenosyl-L-homocysteine hydrolase, NAD binding domain
1111116HAMP domain
22242214ribosomal L5P family C-terminus
55675533Insulinase (Peptidase family M16)
33234419Dehydrogenase E1 component
1111116Lumazine binding domain
55585533Elongation factor G C-terminus
44364425HMGL-like
46484430DnaJ central domain
22222212Ribosomal protein L1p/L10e family
44583630Cation transporting ATPase, C-terminus
666105740Cation transporter/ATPase, N-terminus
22122211dUTPase
55554428Aconitase C-terminal domain
34343320Amino acid kinase family
1112117N-(5'phosphoribosyl)anthranilate (PRA) isomerase
1112117Acyl transferase domain
1111116Urease beta subunit
44321216Dihydrodipicolinate synthetase family
262420351926150haloacid dehalogenase-like hydrolase
61310Glycosyl hydrolases family 2
33443219Glycosyl hydrolases family 18
1111116Proliferating cell nuclear antigen, N-terminal domain
111115Acylphosphatase
1112117Adenylosuccinate synthetase
11341111Asparaginase, N-terminal
23343318Peptidase S24-like
1114119Inorganic pyrophosphatase
11462216Glycosyl hydrolases family 16
22132212Glycosyl hydrolases family 15
55373326NADH:flavin oxidoreductase / NADH oxidase family
232326183-hydroxyacyl-CoA dehydrogenase, C-terminal domain
113128Glycosyl hydrolase family 20, catalytic domain
33453321HhH-GPD superfamily base excision DNA repair protein
1112117AIR carboxylase
23362622GMC oxidoreductase
22352216Asparagine synthase
54484429Septin
1111116EF-1 guanine nucleotide exchange domain
1112117Homoserine dehydrogenase
2253214Flavin-binding monooxygenase-like
33333419tRNA synthetases class I (E and Q), catalytic domain
1111116tRNA synthetases class I (R)
66696639XPG N-terminal domain
756127946Metallo-beta-lactamase superfamily
33233317Choline/Carnitine o-acyltransferase
1112117Putative esterase
1112117Glycosyl hydrolase family 9
1112117Ferrochelatase
22233315Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
1112117Arginosuccinate synthase
1111116Electron transfer flavoprotein FAD-binding domain
33343319RNB domain
246Dioxygenase
32243317CNH domain
22142213Diacylglycerol kinase catalytic domain
654126639Dual specificity phosphatase, catalytic domain
111115MyTH4 domain
43354322P21-Rho-binding domain
12121217111276PX domain
2122119Ras association (RalGDS/AF-6) domain
22353419UBX domain
44464426VHS domain
1112117Phosphoinositide 3-kinase C2
22252215DAHP synthetase I family
667136846Carbon-nitrogen hydrolase
112N-acetyltransferase
1112117Prephenate dehydratase
33343319Syntaxin
43353422Pumilio-family RNA binding repeat
55683633Histone-like transcription factor (CBF/NF-Y) and archaeal histone
1111116Pterin binding enzyme
1111116ER lumen protein retaining receptor
22232213Glycoprotease family
1111116Histidinol dehydrogenase
33383323impB/mucB/samB family
11Ice nucleation protein repeat
1111116
1112117Ribosomal L15
111115Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
11Ribosomal L28 family
111115Ribosomal L29 protein
1111116Ribosomal L39 protein
1111116Ribosomal S17
1111116Ribulose-phosphate 3 epimerase family
1111116Translationally controlled tumour protein
1111116RNA pseudouridylate synthase
77685639Histone deacetylase domain
11162213POT family
12132211PWWP domain
121092911879SET domain
33110320Isochorismatase family
112239Permease family
1112117Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
34594530XPG I-region
1111116Acetokinase family
2529DNA photolyase
112116Cation-independent mannose-6-phosphate receptor repeat
11226Nitroreductase family
22Cytosol aminopeptidase family, catalytic domain
21249Sulfatase
11111166,7-dimethyl-8-ribityllumazine synthase
1111116Ribosomal protein S16
33343319Acyl CoA binding protein
45474428Cullin family
111115Elongation factor TS
22152618FAD binding domain
552105431EamA-like transporter family
1112117
777127747ThiF family
1111116Ribosomal family S4e
11131411Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
11Hepatitis core antigen
22251214Ammonium Transporter Family
34333319Sulfate permease family
111216MATH domain
11Uncharacterized protein family UPF0004
22232314Dehydratase family
22124112Transaldolase/Fructose-6-phosphate aldolase
1111116Mechanosensitive ion channel
1111116GTP cyclohydrolase II
11121173,4-dihydroxy-2-butanone 4-phosphate synthase
33474425Adaptor complexes medium subunit family
77798745Exonuclease
1112117Dipeptidyl peptidase IV (DPP IV) N-terminal region
737133336Glycosyl hydrolase family 3 N terminal domain
111115Ribosomal protein L44
1211117DNA-dependent RNA polymerase
11FAD binding domain in molybdopterin dehydrogenase
1112117Glycosyl transferase family 4
1212118HCO3- transporter family
23232214Nucleosome assembly protein (NAP)
54465428Synaptobrevin
1111116GMP synthase C terminal domain
22Phage lysozyme
11LAGLIDADG endonuclease
11222210Adenosine/AMP deaminase
45543526Oxidoreductase FAD-binding domain
22232213Histidine biosynthesis protein
23332316Glycosyltransferase family 20
1112117UDP-glucose/GDP-mannose dehydrogenase family, central domain
22232213Carbamoyl-phosphate synthase small chain, CPSase domain
2223211PAS fold
1131118Probable molybdopterin binding domain
44464426Sec1 family
22232213GDP dissociation inhibitor
44654528Sodium/hydrogen exchanger family
22222212RNA polymerase Rpb3/RpoA insert domain
45474428Initiation factor 2 subunit family
22116PQQ enzyme repeat
22222212Electron transfer flavoprotein domain
111115Uricase
1111116Ribosomal S3Ae family
1111116Ribosomal L27 protein
1111116GTP1/OBG
33263522Gamma-glutamyltranspeptidase
1113Ribosomal L40e family
1121117GrpE
22232213TatD related DNase
1112117Inhibitor of apoptosis-promoting Bax1
1112117Eukaryotic DNA topoisomerase I, catalytic core
22292219Dynamin central region
1111156-O-methylguanine DNA methyltransferase, DNA binding domain
11332212Bacteriorhodopsin-like protein
22122312Carboxyl transferase domain
22232213UbiA prenyltransferase family
11DegT/DnrJ/EryC1/StrS aminotransferase family
966114844Endoribonuclease L-PSP
11MarR family
34463626Cys/Met metabolism PLP-dependent enzyme