PFAM Domains • Peniophora sp. CONTA v1.0
Annotations/GenomesAurvu1Clapy1Fomme1Hetan1Lopni1Ricme1Stehi1TotalAnnotation Description
PFAMs
8,4328,4877,6005,7039,9039,8479,00558,977
44464137474749311ATPase family associated with various cellular activities (AAA)
38423731575648309ABC transporter
444444428ATP synthase alpha/beta family, nucleotide-binding domain
11EGF-like domain
17161415141415105Elongation factor Tu GTP binding domain
111212911131381Helix-loop-helix DNA-binding domain
610741214558Hsp20/alpha crystallin family
1015961271069Hsp70 protein
988888857KH domain
112Ribulose bisphosphate carboxylase large chain, catalytic domain
11111117SH2 domain
27282821333629202SH3 domain
131112812111279Actin
33322039567334287Ankyrin repeat
6777109753ADP-ribosylation factor family
44303524394036248Eukaryotic aspartyl protease
333333422Cyclic nucleotide-binding domain
211122110Cytochrome c
958313121161Double-stranded RNA binding motif
18191517181917123EF hand
111122194Fe-4S binding domain
11121118Fibronectin type III domain
11Globin
12819414131686Glutathione S-transferase, C-terminal domain
11111117Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
11Hemopexin
17109698968Homeodomain
11114Laminin EGF domain
222222214lactate/malate dehydrogenase, NAD binding domain
112Lipocalin / cytosolic fatty-acid binding protein family
655566740Myosin head (motor domain)
1672721201171831752041,238Cytochrome P450
2171952441191922041571,328Protein kinase domain
17221712212022131Pyridine nucleotide-disulphide oxidoreductase
26262422252425172Ras family
889711121469Response regulator receiver domain
3011111181375RNase H
69755963808065491RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
617Reverse transcriptase (RNA-dependent DNA polymerase)
11111128Copper/zinc superoxide dismutase (SODC)
322222215Iron/manganese superoxide dismutases, alpha-hairpin domain
1635323234Subtilase family
26393246444139267Sugar (and other) transporter
914121012131181Thioredoxin
555566537Tubulin/FtsZ family, GTPase domain
453133524von Willebrand factor type A domain
766254109606155477Zinc finger, C2H2 type
64724839888256449Zinc finger, C3HC4 type (RING finger)
14141492262327210Zinc knuckle
222122213Protein-tyrosine phosphatase
1161209551161158136837short chain dehydrogenase
41375138818078406Zinc-binding dehydrogenase
455555534Thiolase, N-terminal domain
296465840Beta-ketoacyl synthase, N-terminal domain
3334333222Fe-2S iron-sulfur cluster binding domain
11211118Enolase, C-terminal TIM barrel domain
978777752Glutamine amidotransferase class-I
101013910101072TCP-1/cpn60 chaperonin family
11ATP synthase A chain
333344424Glutamine synthetase, catalytic domain
12111118Triosephosphate isomerase
1214121215151191E1-E2 ATPase
19191614141516113Core histone H2A/H2B/H3/H4
112Copper binding proteins, plastocyanin/azurin family
6856661350Alpha amylase, catalytic domain
665476640Phorbol esters/diacylglycerol binding domain (C1 domain)
332333421Bacterial transferase hexapeptide (six repeats)
333533323tRNA synthetases class I (I, L, M and V)
141281215151086Cyclin, N-terminal domain
25262217393732198Carboxylesterase family
443444427DNA polymerase family B
332333320ATP synthase subunit C
8918111919791Peroxidase
2711891139Beta-lactamase
645366636C-5 cytosine-specific DNA methylase
32283019313328201Calcineurin-like phosphoesterase
131215913131590Cellulase (glycosyl hydrolase family 5)
555455635tRNA synthetases class II (D, K and N)
36373433383837253Mitochondrial carrier protein
141314713132094Aminotransferase class I and II
665677542Phosphoribosyl transferase domain
1313121113131388Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
11111117Phosphoglycerate kinase
222222214Ribosomal protein S4/S9 N-terminal domain
223222215Ribosomal protein S12/S23
11111128Chaperonin 10 Kd subunit
15152915151417120C2 domain
21201817212020137PH domain
646654738bZIP transcription factor
21231613141422123Aldehyde dehydrogenase family
62708246999885542Fungal Zn(2)-Cys(6) binuclear cluster domain
27242121212025159Cytochrome b5-like Heme/Steroid binding domain
132222517Oxidoreductase molybdopterin binding domain
886889855Oxidoreductase NAD-binding domain
25262020242227164SNF2 family N-terminal domain
222222214Ribosomal protein S7p/S5e
21212120212121146Ubiquitin-conjugating enzyme
556955540Isocitrate/isopropylmalate dehydrogenase
222222214Ribosomal Proteins L2, RNA binding domain
223222215Hsp90 protein
223233217Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
11111117Dihydrofolate reductase
112Chitin recognition protein
11111139Cysteine-rich secretory protein family
11111117Ribosomal protein S3, C-terminal domain
4723121442Cupin
3433572272-oxoacid dehydrogenases acyltransferase (catalytic domain)
222333318Catalase
11111117Disintegrin
722112UDP-glucoronosyl and UDP-glucosyl transferase
555455635Aminotransferase class-III
222222214Ribosomal protein S19
11111117DNA gyrase B
223222215Thiamine pyrophosphate enzyme, central domain
333333321Lyase
11111128Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
113111210Adenylate and Guanylate cyclase catalytic domain
11111117ATP synthase delta (OSCP) subunit
11111117Orotidine 5'-phosphate decarboxylase / HUMPS family
112134113Indole-3-glycerol phosphate synthase
221324317Aromatic amino acid lyase
11111117Pyruvate kinase, barrel domain
101010899864Kinesin motor domain
30302729343134215DnaJ domain
1514141215151499Proteasome subunit
872399543Major intrinsic protein
11111117ATP synthase
435211319Glycosyl hydrolase family 1
111111173'5'-cyclic nucleotide phosphodiesterase
11Protease inhibitor/seed storage/LTP family
12111118Profilin
112211210Ribosomal protein L22p/L17e
232222215Ribosomal protein L14p/L23e
14171612161715107Ubiquitin family
765355637Cofilin/tropomyosin-type actin-binding protein
32222421714-3-3 protein
221232214Alkaline phosphatase
11111128Zinc carboxypeptidase
49495640757464407Aldo/keto reductase family
1112111013131181Myb-like DNA-binding domain
65541313551Forkhead domain
11114Glycosyl hydrolases family 32 N-terminal domain
11111117Ribosomal protein L16p/L10e
231122112Ribosomal protein S14p/S29e
343277430FKBP-type peptidyl-prolyl cis-trans isomerase
11Glutathione peroxidase
222222214
57751010549Flavodoxin
1113Protamine P1
11Tropomyosin
11112118Calreticulin family
25178730Common central domain of tyrosinase
666366841Aminotransferase class-V
421237524Ribonucleotide reductase, small chain
65544150645154379DEAD/DEAH box helicase
103936973989091617Helicase conserved C-terminal domain
111115Fructose-bisphosphate aldolase class-I
11111128EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
232122214Ribosomal protein L23
11111117Pyridoxal-dependent decarboxylase, C-terminal sheet domain
11111117Ribosomal protein L5
544533529Pyridoxal-dependent decarboxylase conserved domain
333333321Citrate synthase, C-terminal domain
565455535GHMP kinases N terminal domain
666667643Biotin carboxylase, N-terminal domain
11111117Tryptophan synthase alpha chain
9888991061Pyridoxal-phosphate dependent enzyme
14161517161516109NUDIX domain
644255531pfkB family carbohydrate kinase
3214713131769Glycosyl hydrolases family 28
222222214Ribosomal protein L3
211222212Ribosomal protein L11, RNA binding domain
9777771054Histidine phosphatase superfamily (branch 1)
11111117Thymidylate synthase
444444428ATP synthase alpha/beta chain, C terminal domain
554444430Calponin homology (CH) domain
555555636Glutamine amidotransferases class-II
222267223Ribosomal protein S15
32831313951Thaumatin family
141111110Fructose-1-6-bisphosphatase, N-terminal domain
11111229Ribonucleotide reductase, all-alpha domain
233122114Ribosomal protein S2
221122313SRF-type transcription factor (DNA-binding and dimerisation domain)
10109715161279GATA zinc finger
23332119252530176Amino acid permease
109621210958Prolyl oligopeptidase family
11112219Ribosomal protein L30p/L7e
101410712121479Histidine phosphatase superfamily (branch 2)
11111117Respiratory-chain NADH dehydrogenase, 30 Kd subunit
467466437Aconitase family (aconitate hydratase)
634256632Glycosyl hydrolase family 10
11112219Glycosyl hydrolases family 17
222211212Ribosomal protein S5, N-terminal domain
222222214Nucleoside diphosphate kinase
22311110Tetraspanin family
132222214Ribosomal protein S10p/S20e
423155424Arrestin (or S-antigen), N-terminal domain
11131119Phosphoglucose isomerase
11111117Carbohydrate phosphorylase
11112219SecY translocase
1111116Respiratory-chain NADH dehydrogenase, 49 Kd subunit
222222214Ribosomal protein L6
533444831Polyprenyl synthetase
222222214Hexokinase
1077777752Dynamin family
11111128Transcription factor TFIID (or TATA-binding protein, TBP)
335444528Rieske [2Fe-2S] domain
7887810755Biotin-requiring enzyme
11111117Phosphofructokinase
222222214Ribosomal protein S17
11112118Hydroxymethylglutaryl-coenzyme A reductase
434344325FGGY family of carbohydrate kinases, N-terminal domain
7712788857Enoyl-CoA hydratase/isomerase
322222215Ribosomal protein S9/S16
224344221Transcription factor TFIIB repeat
675699749Cytidine and deoxycytidylate deaminase zinc-binding region
11211118Molybdopterin oxidoreductase
1661161214974Chromo (CHRromatin Organisation MOdifier) domain
221122212Phosphatidylinositol-specific phospholipase C, Y domain
221122212Phosphatidylinositol-specific phospholipase C, X domain
1386666954D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
332333320Malic enzyme, N-terminal domain
111111286-phosphogluconate dehydrogenase, C-terminal domain
12171117222321123Multicopper oxidase
1099814161177WW domain
222222214Ribosomal RNA adenine dimethylase
1531391901231581701511,084WD domain, G-beta repeat
443444427Heavy-metal-associated domain
333633324Adenylate kinase
212211110Phosphoglucomutase/phosphomannomutase, C-terminal domain
21121119Ribosomal protein S8
121123111Ribosomal protein S11
667577644LIM domain
156Matrixin
342234422Regulator of chromosome condensation (RCC1) repeat
222222113Ribosomal protein S13/S18
11
11REV protein (anti-repression trans-activator protein)
232222215chorismate binding enzyme
43335532660s Acidic ribosomal protein
445444429Prenyltransferase and squalene oxidase repeat
777488849Protein kinase C terminal domain
11111117Single-strand binding protein family
11111117S-adenosylmethionine synthetase, N-terminal domain
1010121512111080Bromodomain
988877956Acyl-CoA dehydrogenase, C-terminal domain
1314141213131493Ubiquitin carboxyl-terminal hydrolase
1111116Ribosomal protein L36
224233319Ribonuclease T2 family
544155428HSF-type DNA-binding
232222215SRP54-type protein, GTPase domain
11111117Urease alpha-subunit, N-terminal domain
1814149262414119Serine carboxypeptidase
988689856Phosphatidylinositol 3- and 4-kinase
221222314Transketolase, thiamine diphosphate binding domain
42118Glycosyl hydrolases family 11
112WHEP-TRS domain
223222215Inositol monophosphatase family
544475433Glutaredoxin
453244426Isocitrate lyase family
11111117Serine hydroxymethyltransferase
223233520Iron-containing alcohol dehydrogenase
321222214Ribosomal protein L10
445544531KOW motif
11111218Ribosomal protein L34
232333319RF-1 domain
232333420Sodium:solute symporter family
11112219Imidazoleglycerol-phosphate dehydratase
21111118DNA polymerase family A
11111117IMP dehydrogenase / GMP reductase domain
11111117Glucose-6-phosphate dehydrogenase, NAD binding domain
898711101063Protein phosphatase 2C
344232422Nucleotidyl transferase
332488432Carbonic anhydrase
11111117Phosphoribulokinase / Uridine kinase family
1312811981576Fatty acid desaturase
666566641MutS domain V
11111117Delta-aminolevulinic acid dehydratase
343367531Arginase family
666676643MCM P-loop domain
111122210Squalene/phytoene synthase
91498514610147FHA domain
31262623343241213AMP-binding enzyme
1715121214121597G-protein alpha subunit
19162416212122139HMG (high mobility group) box
11Cytochrome c oxidase subunit III
5553881044His Kinase A (phospho-acceptor) domain
342244322Armadillo/beta-catenin-like repeat
46486327526133330Tetratricopeptide repeat
443133321Ion transport protein
11111117DNA gyrase/topoisomerase IV, subunit A
91196991063BRCA1 C Terminus (BRCT) domain
665466639Glycosyl transferases group 1
643455431Glycosyl transferase family 2
21115SAM domain (Sterile alpha motif)
544223424linker histone H1 and H5 family
1111116Ribosomal protein L7/L12 C-terminal domain
1255417Pectate lyase
112228ribonuclease
11111117Urease, gamma subunit
333333321CoA-ligase
578576947Phosphopantetheine attachment site
222222214Formyl transferase
111010911111375Metallopeptidase family M24
15141515131317102Leucine Rich Repeat
29344916514950278alpha/beta hydrolase fold
333233320RNA polymerase Rpb2, domain 6
543355429PB1 domain
222222214Staphylococcal nuclease homologue
999711101065Rab-GTPase-TBC domain
11111117Tudor domain
121143214WH1 domain
443344325Zinc finger, ZZ type
11111117HRDC domain
998599857CBS domain
222222214Ribosomal protein L13
222222214Ribosomal protein L4/L1 family
11111117Clp protease
434344426S1 RNA binding domain
111115HIUase/Transthyretin family
344444528AhpC/TSA family
444244426tRNA synthetases class I (W and Y)
1211117UvrD/REP helicase N-terminal domain
443455530Rhodanese-like domain
222222214Universal stress protein family
34402818454739251Acetyltransferase (GNAT) family
11111117SecE/Sec61-gamma subunits of protein translocation complex
11111117C-terminal regulatory domain of Threonine dehydratase
222122314AIR synthase related protein, N-terminal domain
866666644tRNA synthetase class II core domain (G, H, P, S and T)
11Phage integrase family
225222217Tetrapyrrole (Corrin/Porphyrin) Methylases
11111117Glycosyl transferase family, a/b domain
114211414Class II Aldolase and Adducin N-terminal domain
333222217Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
455233527Fes/CIP4, and EFC/F-BAR homology domain
443386432IQ calmodulin-binding motif
222222214Phosphoinositide 3-kinase family, accessory domain (PIK domain)
433344324Phospholipase D Active site motif
1113118Regulator of G protein signaling domain
444444529GTPase-activator protein for Ras-like GTPase
8866910855RasGEF domain
987488953RasGEF N-terminal motif
1513141214131495RhoGAP domain
141312913131286RhoGEF domain
444344427SPRY domain
333343322RNA polymerase Rpb1, domain 2
11111117Guanylate kinase
542455530Gelsolin repeat
98841010857UBA/TS-N domain
14151512191919113PHD-finger
1221129GGL domain
575555537HECT-domain (ubiquitin-transferase)
312112111Helix-hairpin-helix motif
11111117MSP (Major sperm protein) domain
97451011753Ribonuclease III domain
222233216Region in Clathrin and VPS
331233217RanBP1 domain
222233317PPIC-type PPIASE domain
323232419Zn-finger in Ran binding protein and others
27282015232725165Zinc finger C-x8-C-x5-C-x3-H type (and similar)
13116B-box zinc finger
341241125Poly(ADP-ribose) polymerase catalytic domain
221122111Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
27925484643253241351,465F-box domain
11111117Elongation factor 1 gamma, conserved domain
112111613Calpain family cysteine protease
221222213Copper fist DNA binding domain
776677646CRAL/TRIO domain
51341310484843247BTB/POZ domain
13198426Ricin-type beta-trefoil lectin domain
11111117Inhibitor of Apoptosis domain
333333321Voltage gated chloride channel
111273445539171Caspase domain
768817171073GDSL-like Lipase/Acylhydrolase
11111117Poly-adenylate binding protein, unique domain
21111118POLO box duplicated region
17231911333328164ABC transporter transmembrane region
343313Integrase core domain
334443425FAD binding domain
11152212Condensation domain
11111117S-adenosyl-L-homocysteine hydrolase, NAD binding domain
331111313HAMP domain
222122112ribosomal L5P family C-terminus
5523566555Insulinase (Peptidase family M16)
444444428Dehydrogenase E1 component
11111117Lumazine binding domain
876666746Elongation factor G C-terminus
444566534HMGL-like
443444427DnaJ central domain
362322523Starch binding domain
222122112Ribosomal protein L1p/L10e family
556568439Cation transporting ATPase, C-terminus
787689651Cation transporter/ATPase, N-terminus
11111117dUTPase
457455434Aconitase C-terminal domain
333333321Amino acid kinase family
11111117N-(5'phosphoribosyl)anthranilate (PRA) isomerase
295355635Acyl transferase domain
11111117Urease beta subunit
223333218Dihydrodipicolinate synthetase family
27332626323330207haloacid dehalogenase-like hydrolase
221211211Glycosyl hydrolases family 2
12712916141383Glycosyl hydrolases family 18
11111117Proliferating cell nuclear antigen, N-terminal domain
1111116Adenylosuccinate synthetase
11111117Asparaginase, N-terminal
323333320Peptidase S24-like
11111117Inorganic pyrophosphatase
445433629Glycosyl hydrolases family 16
10141433338Glycosyl hydrolases family 15
2024811393923164NADH:flavin oxidoreductase / NADH oxidase family
111111173-hydroxyacyl-CoA dehydrogenase, C-terminal domain
226355427Glycosyl hydrolase family 20, catalytic domain
664666640HhH-GPD superfamily base excision DNA repair protein
11111117AIR carboxylase
48473231373552282GMC oxidoreductase
322122315Asparagine synthase
2323613212417127Fungal cellulose binding domain
666466640Septin
11111117EF-1 guanine nucleotide exchange domain
11111117Homoserine dehydrogenase
43244522Flavin-binding monooxygenase-like
343233422tRNA synthetases class I (E and Q), catalytic domain
11111117tRNA synthetases class I (R)
466577742XPG N-terminal domain
11912611101372Metallo-beta-lactamase superfamily
2316F5/8 type C domain
544544531Choline/Carnitine o-acyltransferase
11111117Putative esterase
11111117Glycosyl hydrolase family 9
1111116Ferrochelatase
222222214Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
11111117Arginosuccinate synthase
11111117Electron transfer flavoprotein FAD-binding domain
333333321RNB domain
1173331028Dioxygenase
343144423CNH domain
322122113Diacylglycerol kinase catalytic domain
1519228141410102Dual specificity phosphatase, catalytic domain
11111117MyTH4 domain
323245221P21-Rho-binding domain
111213912121584PX domain
323156323Ras association (RalGDS/AF-6) domain
444433426UBX domain
554454532VHS domain
11111117Phosphoinositide 3-kinase C2
222222214DAHP synthetase I family
444644632Carbon-nitrogen hydrolase
21126N-acetyltransferase
11111117Prephenate dehydratase
453555633Syntaxin
565576640Pumilio-family RNA binding repeat
776566643Histone-like transcription factor (CBF/NF-Y) and archaeal histone
11111117Pterin binding enzyme
11111139ER lumen protein retaining receptor
222222214Glycoprotease family
11111117Histidinol dehydrogenase
334334424impB/mucB/samB family
11111117
11111117Ribosomal L15
11111117Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
11111117Ribosomal prokaryotic L21 protein
11111117Ribosomal L28 family
11111117Ribosomal L29 protein
11111117Ribosomal L39 protein
11111117Ribosomal S17
11111117Ribulose-phosphate 3 epimerase family
11111117Translationally controlled tumour protein
522133319Glycosyl hydrolase family 7
222222214RNA pseudouridylate synthase
878577749Histone deacetylase domain
114155219POT family
122222213PWWP domain
2523128313020149SET domain
235477533Isochorismatase family
222333217Permease family
11111117Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
675466842XPG I-region
2111117Acetokinase family
222111312DNA photolyase
1111116Cation-independent mannose-6-phosphate receptor repeat
11111117Cytosol aminopeptidase family, catalytic domain
11133211Sulfatase
111111176,7-dimethyl-8-ribityllumazine synthase
1111116Ribosomal protein S16
232333319Acyl CoA binding protein
555344531Cullin family
1121117Elongation factor TS
555285939FAD binding domain
1724128101321105O-methyltransferase domain
442255527EamA-like transporter family
222223215
777888853ThiF family
11111117Ribosomal family S4e
21111129Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
222222214Ammonium Transporter Family
333344323Sulfate permease family
11112