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PFAM Domains • Tricharina praecox DOB2270 v1.0
Annotations/GenomesAscni1Plemel1Pyrco1Sarco1Trihyb1Tripra1Wilmi1TotalAnnotation Description
PFAMs
6,22611,3407,0498,0239,6688,5877,42158,314
2137 transmembrane receptor (rhodopsin family)
1127 transmembrane receptor (Secretin family)
41574144524455334ATPase family associated with various cellular activities (AAA)
32433434323129235ABC transporter
444544429ATP synthase alpha/beta family, nucleotide-binding domain
14161515151514104Elongation factor Tu GTP binding domain
1098989962Helix-loop-helix DNA-binding domain
475433430Hsp20/alpha crystallin family
817892414989Hsp70 protein
108108991165KH domain
11114SH2 domain
20142221121123123SH3 domain
1010101110101071Actin
5690210230109403071,042Ankyrin repeat
123PAN domain
787989755ADP-ribosylation factor family
3122856339Eukaryotic aspartyl protease
444444428Cyclic nucleotide-binding domain
22Beta/Gamma crystallin
11111117Cytochrome c
333344525Double-stranded RNA binding motif
1721816121773EF hand
121154Fe-4S binding domain
112311211Fibronectin type III domain
613719661067Glutathione S-transferase, C-terminal domain
212121211Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
344334526Homeodomain
222222214lactate/malate dehydrogenase, NAD binding domain
455444430Myosin head (motor domain)
281304591414250427Cytochrome P450
8918598145192109140958Protein kinase domain
101313148101280Pyridine nucleotide-disulphide oxidoreductase
25272626342835201Ras family
13161617161416108Response regulator receiver domain
5324122735RNase H
65646574565969452RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
22Reverse transcriptase (RNA-dependent DNA polymerase)
234433423Copper/zinc superoxide dismutase (SODC)
223223317Iron/manganese superoxide dismutases, alpha-hairpin domain
72110101391282Subtilase family
14553440313427235Sugar (and other) transporter
8912111091069Thioredoxin
2322211Trypsin
454444429Tubulin/FtsZ family, GTPase domain
232511620von Willebrand factor type A domain
502656733620104365Zinc finger, C2H2 type
38948747853237Zinc finger, C3HC4 type (RING finger)
1371225117984Zinc knuckle
222222214Protein-tyrosine phosphatase
431345098374946457short chain dehydrogenase
16732443161828218Zinc-binding dehydrogenase
665554536Thiolase, N-terminal domain
24032132778Beta-ketoacyl synthase, N-terminal domain
4345234252Fe-2S iron-sulfur cluster binding domain
11111117Enolase, C-terminal TIM barrel domain
8810988859Glutamine amidotransferase class-I
10101099101068TCP-1/cpn60 chaperonin family
343632324Glutamine synthetase, catalytic domain
12111118Triosephosphate isomerase
13181412191818112E1-E2 ATPase
81588891167Core histone H2A/H2B/H3/H4
11Copper binding proteins, plastocyanin/azurin family
134455527Alpha amylase, catalytic domain
213222214Phorbol esters/diacylglycerol binding domain (C1 domain)
8591246751Bacterial transferase hexapeptide (six repeats)
564466435tRNA synthetases class I (I, L, M and V)
797788753Cyclin, N-terminal domain
7281322121410106Carboxylesterase family
444344427DNA polymerase family B
533433324ATP synthase subunit C
162212216Peroxidase
83322220Beta-lactamase
354433325C-5 cytosine-specific DNA methylase
22222326201721151Calcineurin-like phosphoesterase
420712510361Cellulase (glycosyl hydrolase family 5)
6761066647tRNA synthetases class II (D, K and N)
35354037343734252Mitochondrial carrier protein
11recA bacterial DNA recombination protein
12171514181516107Aminotransferase class I and II
8491144949Phosphoribosyl transferase domain
1111111411121181Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
11111117Phosphoglycerate kinase
222222214Ribosomal protein S4/S9 N-terminal domain
222222214Ribosomal protein S12/S23
112Bacterial regulatory helix-turn-helix proteins, AraC family
11111117Chaperonin 10 Kd subunit
1111121312111383C2 domain
20101817111319108PH domain
9138111112670bZIP transcription factor
1117131312131291Aldehyde dehydrogenase family
731127779647576556Fungal Zn(2)-Cys(6) binuclear cluster domain
18192219181919134Cytochrome b5-like Heme/Steroid binding domain
133322216Oxidoreductase molybdopterin binding domain
8109108111167Oxidoreductase NAD-binding domain
22412625473139231SNF2 family N-terminal domain
222222214Ribosomal protein S7p/S5e
23242124242525166Ubiquitin-conjugating enzyme
575655538Isocitrate/isopropylmalate dehydrogenase
242223217Ribosomal Proteins L2, RNA binding domain
11121118Hsp90 protein
222222214Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
11111117Dihydrofolate reductase
575351329Chitin recognition protein
3108564541Cysteine-rich secretory protein family
11111117Ribosomal protein S3, C-terminal domain
5211110Cupin
322333420Annexin
112122312Eukaryotic-type carbonic anhydrase
3343333222-oxoacid dehydrogenases acyltransferase (catalytic domain)
363453327Catalase
11111117Disintegrin
3328UDP-glucoronosyl and UDP-glucosyl transferase
485464637Aminotransferase class-III
222322215Ribosomal protein S19
11111117DNA gyrase B
434444427Thiamine pyrophosphate enzyme, central domain
343333322Lyase
222222214Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
11111117Adenylate and Guanylate cyclase catalytic domain
11Atrial natriuretic peptide
11111117ATP synthase delta (OSCP) subunit
11111218Orotidine 5'-phosphate decarboxylase / HUMPS family
11111117Indole-3-glycerol phosphate synthase
3121119Aromatic amino acid lyase
11121118Pyruvate kinase, barrel domain
910101010101069Kinesin motor domain
26282728252726187DnaJ domain
1414141512141497Proteasome subunit
282533326Major intrinsic protein
11111117ATP synthase
131222112Glycosyl hydrolase family 1
111111173'5'-cyclic nucleotide phosphodiesterase
1111116Profilin
221222213Ribosomal protein L22p/L17e
222222214Ribosomal protein L14p/L23e
13171021141416105Ubiquitin family
443444326Cofilin/tropomyosin-type actin-binding protein
33223331914-3-3 protein
314512420Alkaline phosphatase
2222210Zinc carboxypeptidase
13342226171618146Aldo/keto reductase family
1581914881890Myb-like DNA-binding domain
444444428Forkhead domain
1111116Glycosyl hydrolases family 32 N-terminal domain
121122110Ribosomal protein L16p/L10e
222322215Ribosomal protein S14p/S29e
533344325FKBP-type peptidyl-prolyl cis-trans isomerase
11111117Glutathione peroxidase
22228
544644532Flavodoxin
11121219Calreticulin family
81013916161587Common central domain of tyrosinase
676665541Aminotransferase class-V
11121118Ribonucleotide reductase, small chain
42564643484845328DEAD/DEAH box helicase
728382798683100585Helicase conserved C-terminal domain
11Fructose-bisphosphate aldolase class-I
11121118EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
222222214Ribosomal protein L23
11111117Pyridoxal-dependent decarboxylase, C-terminal sheet domain
212311212Ribosomal protein L5
579686647Pyridoxal-dependent decarboxylase conserved domain
353344325Citrate synthase, C-terminal domain
555535533GHMP kinases N terminal domain
666556539Biotin carboxylase, N-terminal domain
11111117Tryptophan synthase alpha chain
101210111091173Pyridoxal-phosphate dependent enzyme
1116131713121193NUDIX domain
555657538pfkB family carbohydrate kinase
101612121Glycosyl hydrolases family 28
11Luciferase-like monooxygenase
222322215Ribosomal protein L3
222322215Ribosomal protein L11, RNA binding domain
8129111091069Histidine phosphatase superfamily (branch 1)
11111117Thymidylate synthase
1113Lipoxygenase
444544429ATP synthase alpha/beta chain, C terminal domain
555565637Calponin homology (CH) domain
534433527Glutamine amidotransferases class-II
222122213Ribosomal protein S15
1146Thaumatin family
11111117Fructose-1-6-bisphosphatase, N-terminal domain
11111117Ribonucleotide reductase, all-alpha domain
222422216Ribosomal protein S2
222244218SRF-type transcription factor (DNA-binding and dimerisation domain)
767867748GATA zinc finger
1416202311726117Amino acid permease
492565435Prolyl oligopeptidase family
232112112Ribosomal protein L30p/L7e
496654539Histidine phosphatase superfamily (branch 2)
11111117Respiratory-chain NADH dehydrogenase, 30 Kd subunit
454444429Aconitase family (aconitate hydratase)
133324117Glycosyl hydrolase family 10
444445429Glycosyl hydrolases family 17
222222214Ribosomal protein S5, N-terminal domain
11111117Nucleoside diphosphate kinase
111115Tetraspanin family
1135Galactoside-binding lectin
224422218Ribosomal protein S10p/S20e
333334322Arrestin (or S-antigen), N-terminal domain
11111117Phosphoglucose isomerase
11111117Carbohydrate phosphorylase
11111117SecY translocase
1111217Respiratory-chain NADH dehydrogenase, 49 Kd subunit
222222214Ribosomal protein L6
453353528Polyprenyl synthetase
344432323Hexokinase
516481161060Dynamin family
11131119Transcription factor TFIID (or TATA-binding protein, TBP)
344343425Rieske [2Fe-2S] domain
1113Phytochrome region
888768752Biotin-requiring enzyme
11111218Phosphofructokinase
121212110Ribosomal protein S17
11111117Hydroxymethylglutaryl-coenzyme A reductase
333323320FGGY family of carbohydrate kinases, N-terminal domain
7117777753Enoyl-CoA hydratase/isomerase
222223215Ribosomal protein S9/S16
454632327Transcription factor TFIIB repeat
575865642Cytidine and deoxycytidylate deaminase zinc-binding region
11111117Molybdopterin oxidoreductase
611781591470Chromo (CHRromatin Organisation MOdifier) domain
222222214Phosphatidylinositol-specific phospholipase C, Y domain
342244322Phosphatidylinositol-specific phospholipase C, X domain
656535434D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
222221213Malic enzyme, N-terminal domain
2221222136-phosphogluconate dehydrogenase, C-terminal domain
41046117749Multicopper oxidase
112Granulin
101111101091374WW domain
232222215Ribosomal RNA adenine dimethylase
3339Yeast PIR protein repeat
112117108115140110108810WD domain, G-beta repeat
453355429Heavy-metal-associated domain
434444427Adenylate kinase
231233115Phosphoglucomutase/phosphomannomutase, C-terminal domain
223222215Ribosomal protein S8
221322214Ribosomal protein S11
454554633LIM domain
112Matrixin
243343120Regulator of chromosome condensation (RCC1) repeat
222222214Ribosomal protein S13/S18
222332216chorismate binding enzyme
33443332360s Acidic ribosomal protein
444433426Prenyltransferase and squalene oxidase repeat
537554534Protein kinase C terminal domain
11111117Single-strand binding protein family
11111117S-adenosylmethionine synthetase, N-terminal domain
676668645Bromodomain
910810109965Acyl-CoA dehydrogenase, C-terminal domain
13161516171615108Ubiquitin carboxyl-terminal hydrolase
11111117Ribosomal protein L36
121221211Ribonuclease T2 family
333533323HSF-type DNA-binding
223322216SRP54-type protein, GTPase domain
11111117Urease alpha-subunit, N-terminal domain
3143754642Serine carboxypeptidase
888879856Phosphatidylinositol 3- and 4-kinase
11121118Transketolase, thiamine diphosphate binding domain
11Glycosyl hydrolases family 11
234233320Inositol monophosphatase family
445544430Glutaredoxin
222222315Isocitrate lyase family
222222214Serine hydroxymethyltransferase
341222216Iron-containing alcohol dehydrogenase
123122213Ribosomal protein L10
555554534KOW motif
1111116Ribosomal protein L34
11Ribosomal protein L33
232233217RF-1 domain
232223216Sodium:solute symporter family
11111117Imidazoleglycerol-phosphate dehydratase
11111117DNA polymerase family A
11111117IMP dehydrogenase / GMP reductase domain
11111117Glucose-6-phosphate dehydrogenase, NAD binding domain
565755538Protein phosphatase 2C
344634327Nucleotidyl transferase
273321119Carbonic anhydrase
21238Phosphoribulokinase / Uridine kinase family
465554433Fatty acid desaturase
666686846MutS domain V
11111117Delta-aminolevulinic acid dehydratase
254323221Arginase family
666667643MCM P-loop domain
232224217Squalene/phytoene synthase
791181112765FHA domain
19442626222820185AMP-binding enzyme
333343322G-protein alpha subunit
8887106855HMG (high mobility group) box
11NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
910121212101176His Kinase A (phospho-acceptor) domain
333222318Armadillo/beta-catenin-like repeat
23153024261551184Tetratricopeptide repeat
232512217Ion transport protein
11111117DNA gyrase/topoisomerase IV, subunit A
8121112791069BRCA1 C Terminus (BRCT) domain
545654534Glycosyl transferases group 1
233212316Glycosyl transferase family 2
122121110SAM domain (Sterile alpha motif)
11111117linker histone H1 and H5 family
11111117Ribosomal protein L7/L12 C-terminal domain
182525326Pectate lyase
3115ribonuclease
11111117Urease, gamma subunit
444344427CoA-ligase
64381176687Phosphopantetheine attachment site
222322215Formyl transferase
6117888755Metallopeptidase family M24
1531411211662Leucine Rich Repeat
211520274521113alpha/beta hydrolase fold
333334322RNA polymerase Rpb2, domain 6
344444427PB1 domain
222222214Staphylococcal nuclease homologue
1012101011121075Rab-GTPase-TBC domain
11111117Tudor domain
11111117WH1 domain
355553531Zinc finger, ZZ type
12111129HRDC domain
1061097101062CBS domain
222242216Ribosomal protein L13
222222113Ribosomal protein L4/L1 family
11111117Clp protease
244433323S1 RNA binding domain
11111117HIUase/Transthyretin family
443534528AhpC/TSA family
444454429tRNA synthetases class I (W and Y)
131263218UvrD/REP helicase N-terminal domain
5845109647Rhodanese-like domain
222222214Universal stress protein family
25272036162022166Acetyltransferase (GNAT) family
1111116SecE/Sec61-gamma subunits of protein translocation complex
11111117C-terminal regulatory domain of Threonine dehydratase
222322215AIR synthase related protein, N-terminal domain
878976853tRNA synthetase class II core domain (G, H, P, S and T)
222222214SpoU rRNA Methylase family
222232215Tetrapyrrole (Corrin/Porphyrin) Methylases
221211110Glycosyl transferase family, a/b domain
1113PDZ domain
264333324Class II Aldolase and Adducin N-terminal domain
444444428Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
455555534Fes/CIP4, and EFC/F-BAR homology domain
345442628IQ calmodulin-binding motif
222222214Phosphoinositide 3-kinase family, accessory domain (PIK domain)
535533529Phospholipase D Active site motif
151165120Regulator of G protein signaling domain
444444428GTPase-activator protein for Ras-like GTPase
555565536RasGEF domain
555545534RasGEF N-terminal motif
1010111110101072RhoGAP domain
666656641RhoGEF domain
311642181063SPRY domain
333333321RNA polymerase Rpb1, domain 2
321112111Guanylate kinase
333533323Gelsolin repeat
85101177856UBA/TS-N domain
13151316161218103PHD-finger
11Filamin/ABP280 repeat
11111117GGL domain
666667643HECT-domain (ubiquitin-transferase)
21111118Helix-hairpin-helix motif
21111118MSP (Major sperm protein) domain
646644939Ribonuclease III domain
252264223Region in Clathrin and VPS
233432320RanBP1 domain
213222315PPIC-type PPIASE domain
232232317Zn-finger in Ran binding protein and others
14112024121519115Zinc finger C-x8-C-x5-C-x3-H type (and similar)
11B-box zinc finger
242432320Poly(ADP-ribose) polymerase catalytic domain
1121117Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
502865175171381429F-box domain
11111117Elongation factor 1 gamma, conserved domain
222221213Calpain family cysteine protease
121211210Copper fist DNA binding domain
455553532CRAL/TRIO domain
1115161636717118BTB/POZ domain
123Ricin-type beta-trefoil lectin domain
11111117Inhibitor of Apoptosis domain
333433322Voltage gated chloride channel
137181627Caspase domain
488636439GDSL-like Lipase/Acylhydrolase
11111117Poly-adenylate binding protein, unique domain
1111116POLO box duplicated region
13201413141412100ABC transporter transmembrane region
22Integrase core domain
465566537FAD binding domain
2112222223Condensation domain
11111117S-adenosyl-L-homocysteine hydrolase, NAD binding domain
11111117HAMP domain
223421216ribosomal L5P family C-terminus
666766643Insulinase (Peptidase family M16)
333333321Dehydrogenase E1 component
11111117Lumazine binding domain
666656641Elongation factor G C-terminus
454434428HMGL-like
444444428DnaJ central domain
22Starch binding domain
232233217Ribosomal protein L1p/L10e family
7886991057Cation transporting ATPase, C-terminus
87878101159Cation transporter/ATPase, N-terminus
1211117dUTPase
454444429Aconitase C-terminal domain
434444427Amino acid kinase family
11111117N-(5'phosphoribosyl)anthranilate (PRA) isomerase
23932133778Acyl transferase domain
11111117Urease beta subunit
243333321Dihydrodipicolinate synthetase family
28142728151531158haloacid dehalogenase-like hydrolase
42321113Glycosyl hydrolases family 2
2125634436Glycosyl hydrolases family 18
111411110Proliferating cell nuclear antigen, N-terminal domain
1113Translation initiation factor IF-3, C-terminal domain
11111117Acylphosphatase
11111117Adenylosuccinate synthetase
122121211Asparaginase, N-terminal
323232318Peptidase S24-like
11121118Inorganic pyrophosphatase
52287710766Glycosyl hydrolases family 16
132412215Glycosyl hydrolases family 15
3104525231NADH:flavin oxidoreductase / NADH oxidase family
1221222123-hydroxyacyl-CoA dehydrogenase, C-terminal domain
131213112Glycosyl hydrolase family 20, catalytic domain
354545329HhH-GPD superfamily base excision DNA repair protein
11121118AIR carboxylase
3351516161316114GMC oxidoreductase
222222214Asparagine synthase
213715310252Fungal cellulose binding domain
666667643Septin
1111116EF-1 guanine nucleotide exchange domain
11112118Homoserine dehydrogenase
18114217Flavin-binding monooxygenase-like
343333322tRNA synthetases class I (E and Q), catalytic domain
11121118tRNA synthetases class I (R)
443435427XPG N-terminal domain
555735838Metallo-beta-lactamase superfamily
1111116F5/8 type C domain
222233216Choline/Carnitine o-acyltransferase
11111117Putative esterase
11111117Ferrochelatase
222222214Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
11121118Arginosuccinate synthase
11111117Electron transfer flavoprotein FAD-binding domain
11Ezrin/radixin/moesin family
333343322RNB domain
186648538Dioxygenase
333323320CNH domain
122222213Diacylglycerol kinase catalytic domain
101091198865Dual specificity phosphatase, catalytic domain
223222316P21-Rho-binding domain
1214141313131392PX domain
223322317Ras association (RalGDS/AF-6) domain
333467531UBX domain
444455430VHS domain
11111117Phosphoinositide 3-kinase C2
232221214DAHP synthetase I family
596655541Carbon-nitrogen hydrolase
11114N-acetyltransferase
33Geminivirus Rep catalytic domain
11111117Prephenate dehydratase
343434526Syntaxin
545544532Pumilio-family RNA binding repeat
667656642Histone-like transcription factor (CBF/NF-Y) and archaeal histone
11111117Pterin binding enzyme
223324218ER lumen protein retaining receptor
222222214tRNA N6-adenosine threonylcarbamoyltransferase
11111117Histidinol dehydrogenase
343433323impB/mucB/samB family
11114
11111218Ribosomal L15
131143114Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
11111117Ribosomal L28 family
11111117Ribosomal L29 protein
11111117Ribosomal L39 protein
11121118Ribosomal S17
11111117Ribulose-phosphate 3 epimerase family
11111117Translationally controlled tumour protein
1422211Glycosyl hydrolase family 7
11Ring hydroxylating alpha subunit (catalytic domain)
11111117RNA pseudouridylate synthase
554655535Histone deacetylase domain
363642529POT family
12111118PWWP domain
1212131517141497SET domain
4134746644Isochorismatase family
344334425Permease family
21111118Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
444436429XPG I-region
11111117Acetokinase family
11Transposase, Mutator family
11AcrB/AcrD/AcrF family
212222112DNA photolyase
31127NlpC/P60 family
11Cation-independent mannose-6-phosphate receptor repeat
12115Nitroreductase family
1113Zinc dependent phospholipase C
2