PFAM Domains • Mycena latifolia 10383 v1.0
Annotations/GenomesMyc59_1Mycalb1Mycale1Mycami1Mycbel1Myccro1Mycepi1Mycfil1Mycflo1Mycgal1Mychae1Myclat1Mycreb1Mycros1Mycrub1Mycsan1Mycvit1TotalAnnotation Description
PFAMs
15,27418,68916,13214,70911,57815,95718,56017,61615,49021,25511,85019,67523,64515,70518,17517,75215,505287,567
1112167 transmembrane receptor (rhodopsin family)
21147 transmembrane receptor (Secretin family)
81686962495867646077497088536459571,095ATPase family associated with various cellular activities (AAA)
83101877457721039463115611001228912490821,517ABC transporter
4456453644447454578ATP synthase alpha/beta family, nucleotide-binding domain
2234212018171922172017211920221819346Elongation factor Tu GTP binding domain
2122212115162021112317182117182221325Helix-loop-helix DNA-binding domain
14710138121111810107101110515172Hsp20/alpha crystallin family
101714189141416131312132114212713259Hsp70 protein
89106108888887888817147KH domain
1622172217151918213320172018241921339SH3 domain
1620181712161624132215162318211514296Actin
161115737183792536516015145215728546291,253Ankyrin repeat
213124114PAN domain
142515141016161215149162817151311260ADP-ribosylation factor family
538366764062927942119499085689167701,232Eukaryotic aspartyl protease
3333333434333333353Cyclic nucleotide-binding domain
11Beta/Gamma crystallin
123Cytochrome b/b6/petB
121322213222222130Cytochrome c
513105568691357117877132Double-stranded RNA binding motif
2222223223333233241EF hand
114Fe-4S binding domain
121116Fibronectin type III domain
2437252834345029105418359431404033616Glutathione S-transferase, C-terminal domain
1111111111111121118Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
1113Hemopexin
131210131211141010139161411131110202Homeodomain
2222222322123222336lactate/malate dehydrogenase, NAD binding domain
6687961310496711751612142Myosin head (motor domain)
2394692312231702914203012765441584466743324594062725,911Cytochrome P450
3943343122702533623844253754552533385253083433313716,033Protein kinase domain
1619161414211826242115202116191822320Pyridine nucleotide-disulphide oxidoreductase
4965534430424653328943468254707540913Ras family
1214191216101623172412151713161619271Response regulator receiver domain
3852551110934640244830213547463332661RNase H
101687577678566758080636774696268661,243RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
1113Reverse transcriptase (RNA-dependent DNA polymerase)
11111111111111115Copper/zinc superoxide dismutase (SODC)
4342333523232222247Iron/manganese superoxide dismutases, alpha-hairpin domain
33554826324357432177306210150667540859Subtilase family
64706655536580656394568183777175551,173Sugar (and other) transporter
1215181615141415151613161315161413250Thioredoxin
9101081178861089881097146Tubulin/FtsZ family, GTPase domain
112von Willebrand factor type A domain
11WAP-type (Whey Acidic Protein) 'four-disulfide core'
3251485937515044784131494834504453800Zinc finger, C2H2 type
251734351538173314201221151261539368Zinc finger, C3HC4 type (RING finger)
172624923233126212925164132211819401Zinc knuckle
4232222423222233141Protein-tyrosine phosphatase
1432961941701162652632771082791202992462032642442403,727short chain dehydrogenase
4590505748828473701053510797769370921,274Zinc-binding dehydrogenase
5556565565565545588Thiolase, N-terminal domain
7299448119738992310111615219Beta-ketoacyl synthase, N-terminal domain
32312223122222222352Fe-2S iron-sulfur cluster binding domain
112Papain family cysteine protease
1113111112221111122Enolase, C-terminal TIM barrel domain
11Cytochrome C oxidase subunit II, periplasmic domain
91289888981379888911152Glutamine amidotransferase class-I
10101111101010121010913121111910179TCP-1/cpn60 chaperonin family
6543443445457364475Glutamine synthetase, catalytic domain
2221111231112111225Triosephosphate isomerase
2222291717212223212717282719202019371E1-E2 ATPase
3858365123383543234924265034383338637Core histone H2A/H2B/H3/H4
1111116Copper binding proteins, plastocyanin/azurin family
12131515151420167157211415171716249Alpha amylase, catalytic domain
5544547875455544485Phorbol esters/diacylglycerol binding domain (C1 domain)
56667878566697485109Bacterial transferase hexapeptide (six repeats)
6445754544486454786tRNA synthetases class I (I, L, M and V)
1420211328251226121615231314161222302Cyclin, N-terminal domain
591167764277313876691175412514910411586691,518Carboxylesterase family
4455454464447444476DNA polymerase family B
2432333343334333352ATP synthase subunit C
2562343416246920196810537932916839743Peroxidase
203026229212828114813255829352721451Beta-lactamase
661065976586556556106C-5 cytosine-specific DNA methylase
3544383531374348314626393730393533627Calcineurin-like phosphoesterase
2631302422253123333824283625293326484Cellulase (glycosyl hydrolase family 5)
555655791265756675106tRNA synthetases class II (D, K and N)
4445444437504243444641515141474042752Mitochondrial carrier protein
11recA bacterial DNA recombination protein
2219242016212223182817272320211923363Aminotransferase class I and II
4444444334444333362Phosphoribosyl transferase domain
1520141312151919132212161714141313261Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1111111111111111117Phosphoglycerate kinase
2222223222233222237Ribosomal protein S4/S9 N-terminal domain
2222222222223222235Ribosomal protein S12/S23
1111111221112111120Chaperonin 10 Kd subunit
2328211517173416163618232418252016367C2 domain
710910699111610971181369160PH domain
2510121712141116151415161810151411245bZIP transcription factor
1823251725242325265618233122222523426Aldehyde dehydrogenase family
112202157165951841841781312101102102101451761831782,830Fungal Zn(2)-Cys(6) binuclear cluster domain
2128263523252829252521263927282626458Cytochrome b5-like Heme/Steroid binding domain
2312233331135241342Oxidoreductase molybdopterin binding domain
81811119131515151511171714131514231Oxidoreductase NAD-binding domain
3033352925272833333025273028272931500SNF2 family N-terminal domain
2222132222224222438Ribosomal protein S7p/S5e
2833312425282638233825273628313027498Ubiquitin-conjugating enzyme
76769666666665667107Isocitrate/isopropylmalate dehydrogenase
2242222222223222237Ribosomal Proteins L2, RNA binding domain
2242322222238223346Hsp90 protein
2222222243224222340Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1111111112111111118Dihydrofolate reductase
2414325117238245Chitin recognition protein
87452236452910266485Cysteine-rich secretory protein family
1111111111111131119Ribosomal protein S3, C-terminal domain
81717791227156115152316161410228Cupin
1311111212214212228Annexin
112122222141324Eukaryotic-type carbonic anhydrase
21122326174135141Chalcone and stilbene synthases, N-terminal domain
53333437344383334662-oxoacid dehydrogenases acyltransferase (catalytic domain)
3674155426743755579Catalase
1111111131111111220Disintegrin
71811131017239816334342019511258UDP-glucoronosyl and UDP-glucosyl transferase
61291567765106798899139Aminotransferase class-III
2222222222222242236Ribosomal protein S19
112211131112111121DNA gyrase B
4546534547466678488Thiamine pyrophosphate enzyme, central domain
3323334333335343455Lyase
2211222122222262235Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
2332122353222233242Adenylate and Guanylate cyclase catalytic domain
2111111111111111118ATP synthase delta (OSCP) subunit
1112111111111211119Orotidine 5'-phosphate decarboxylase / HUMPS family
1211111121116121226Indole-3-glycerol phosphate synthase
45223424103322434360Aromatic amino acid lyase
1111121111111111118Pyruvate kinase, barrel domain
161812121113101311118192013121114224Kinesin motor domain
3239353033353237343530353533353533578DnaJ domain
1616171514201618211814162018161618289Proteasome subunit
77119361164105778757120Major intrinsic protein
1311212111122211124ATP synthase
3334343375446333364Glycosyl hydrolase family 1
21111411121111111223'5'-cyclic nucleotide phosphodiesterase
2111111211111111119Profilin
2222222223222222235Ribosomal protein L22p/L17e
2223293426332322353Ribosomal protein L14p/L23e
1324162018162718232015182220232321337Ubiquitin family
4665555557455655588Cofilin/tropomyosin-type actin-binding protein
141311213321622524014-3-3 protein
1214Alkaline phosphatase
22251211312111126Zinc carboxypeptidase
77128736256861001148311066105125881091021001,584Aldo/keto reductase family
87139879101078898778143Myb-like DNA-binding domain
2499109187115118129871010177Forkhead domain
1111211211111111119Glycosyl hydrolases family 32 N-terminal domain
3423222422113222239Ribosomal protein L16p/L10e
2222222232322225239Ribosomal protein S14p/S29e
4333464543344433565FKBP-type peptidyl-prolyl cis-trans isomerase
111112111111111117Glutathione peroxidase
51596471313711813131281312169Flavodoxin
123Tropomyosin
1111111111111211118Calreticulin family
411645663574811111088117Common central domain of tyrosinase
91212121210121591412111010131314200Aminotransferase class-V
42422926520725224482Ribonucleotide reductase, small chain
22612999698212511097128155731121781431071141012,048DEAD/DEAH box helicase
195140122103101140127131156173911311851271201291312,302Helicase conserved C-terminal domain
1111111115111111222EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
2322122222322522238Ribosomal protein L23
1211121222231322230Pyridoxal-dependent decarboxylase, C-terminal sheet domain
21111111111115111132Ribosomal protein L5
6101210676946611713866133Pyridoxal-dependent decarboxylase conserved domain
9544444644454477483Citrate synthase, C-terminal domain
5554557856557655593GHMP kinases N terminal domain
57656768996696767115Biotin carboxylase, N-terminal domain
1112111111111111118Tryptophan synthase alpha chain
14151191210914913811121013138191Pyridoxal-phosphate dependent enzyme
22141111'Paired box' domain
1716151714151517161714172116141617274NUDIX domain
5554545665456555585pfkB family carbohydrate kinase
37292815812272111298275121251913381Glycosyl hydrolases family 28
11Luciferase-like monooxygenase
2382222224325222247Ribosomal protein L3
2222222242225222239Ribosomal protein L11, RNA binding domain
1212999111012111111101310101110181Histidine phosphatase superfamily (branch 1)
1121211111111211120Thymidylate synthase
1146Lipoxygenase
4456453545445454475ATP synthase alpha/beta chain, C terminal domain
4567665656673654693Calponin homology (CH) domain
3222232223222222237Glutamine amidotransferases class-II
1322222222222222234Ribosomal protein S15
111512751212124271413178182612225Thaumatin family
1113111121111111120Fructose-1-6-bisphosphatase, N-terminal domain
3353384526346433873Ribonucleotide reductase, all-alpha domain
2222222222222252237Ribosomal protein S2
3333334333333243655SRF-type transcription factor (DNA-binding and dimerisation domain)
3830305318414031535216635623424825659GATA zinc finger
1615141012131316111312141612161318234Amino acid permease
22Bacterial regulatory proteins, crp family
131813161016131511148191415141314236Prolyl oligopeptidase family
2222323222232322339Ribosomal protein L30p/L7e
141510121014141591411141215141114218Histidine phosphatase superfamily (branch 2)
1111111111111111117Respiratory-chain NADH dehydrogenase, 30 Kd subunit
5554455455465555582Aconitase family (aconitate hydratase)
877567867106894786119Glycosyl hydrolase family 10
2341333521243322245Glycosyl hydrolases family 17
2222222222232122234Ribosomal protein S5, N-terminal domain
2222222222222222234Nucleoside diphosphate kinase
1077756783669109787122Tetraspanin family
213Galactoside-binding lectin
2322222222222344240Ribosomal protein S10p/S20e
9171812109171910208141712181412236Arrestin (or S-antigen), N-terminal domain
1111111111111111117Phosphoglucose isomerase
114212112411133111150Carbohydrate phosphorylase
1213113111111211123SecY translocase
111311121111211322Respiratory-chain NADH dehydrogenase, 49 Kd subunit
1222222222222222233Ribosomal protein L6
1010543756713461181085122Polyprenyl synthetase
2453322324224263251Hexokinase
2514191611121614212113141413141915271Dynamin family
1621111311215112131Transcription factor TFIID (or TATA-binding protein, TBP)
4432333435233365359Rieske [2Fe-2S] domain
12121151215112127Phytochrome region
11Proton-conducting membrane transporter
988789711111088978108146Biotin-requiring enzyme
1111111111111111117Phosphofructokinase
2222222222212122232Ribosomal protein S17
1412222112131211128Hydroxymethylglutaryl-coenzyme A reductase
3344343333343333355FGGY family of carbohydrate kinases, N-terminal domain
91714101013171981715193117201513264Enoyl-CoA hydratase/isomerase
33Insect cuticle protein
1222223222222222234Ribosomal protein S9/S16
2222222322222222336Transcription factor TFIIB repeat
98914781091089117710107153Cytidine and deoxycytidylate deaminase zinc-binding region
111111111111111116Molybdopterin oxidoreductase
24111325111410101619129131612917241Chromo (CHRromatin Organisation MOdifier) domain
3533333423333533355Phosphatidylinositol-specific phospholipase C, Y domain
86610676125768187656129Phosphatidylinositol-specific phospholipase C, X domain
7108118712758678710158144D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
2232232222222222236Malic enzyme, N-terminal domain
12111111111312212236-phosphogluconate dehydrogenase, C-terminal domain
3336392718355245243812545432443825606Multicopper oxidase
8889710791010871477126147WW domain
3222323542232222243Ribosomal RNA adenine dimethylase
2001951631341321602091681431821361571881602141371612,839WD domain, G-beta repeat
6334334334366444366Heavy-metal-associated domain
4333333333333333352Adenylate kinase
2232233323233333244Phosphoglucomutase/phosphomannomutase, C-terminal domain
3222322222232222237Ribosomal protein S8
2252233242223222242Ribosomal protein S11
666867667666