PFAM Domains • Blakeslea trispora NRRL 2456 v1.0
Annotations/GenomesBacci1Blatri1Lichy1Mucci2Phybl2Rhimi1_1Umbra1TotalAnnotation Description
PFAMs
13,47810,52410,4669,5849,2168,6268,51570,409
117 transmembrane receptor (Secretin family)
5214333217 transmembrane sweet-taste receptor of 3 GCPR
53404544483840308ATPase family associated with various cellular activities (AAA)
67406052483435336ABC transporter
12859127760ATP synthase alpha/beta family, nucleotide-binding domain
1124EGF-like domain
25201917211818138Elongation factor Tu GTP binding domain
75375137353931305Helix-loop-helix DNA-binding domain
44277226Hsp20/alpha crystallin family
191414111210989Hsp70 protein
199151412131395KH domain
111115SH2 domain
89326541374845357SH3 domain
1612121111111083Actin
71145142374564324Ankyrin repeat
1581112109974ADP-ribosylation factor family
35192727332023184Eukaryotic aspartyl protease
779777650Cyclic nucleotide-binding domain
11Cytochrome b(C-terminal)/b6/petD
134Cytochrome b/b6/petB
213112111Cytochrome c
113111210Double-stranded RNA binding motif
5424443353334245EF hand
12111174Fe-4S binding domain
21211119Fibronectin type III domain
42222113Globin
20312137111581Glutathione S-transferase, C-terminal domain
632333121Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
55213727282918215Homeodomain
836553333lactate/malate dehydrogenase, NAD binding domain
22Lectin C-type domain
2115151716168108Myosin head (motor domain)
85326441543549360Cytochrome P450
3582212772372202101651,688Protein kinase domain
23131918161516120Pyridine nucleotide-disulphide oxidoreductase
82505960545139395Ras family
30183315181720151Response regulator receiver domain
12216RNase H
1378510988979695707RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
1337Reverse transcriptase (RNA-dependent DNA polymerase)
553323223Copper/zinc superoxide dismutase (SODC)
11121118Iron/manganese superoxide dismutases, alpha-hairpin domain
31221916241511138Subtilase family
66304647282247286Sugar (and other) transporter
18161415131613105Thioredoxin
11Thyroglobulin type-1 repeat
11Trefoil (P-type) domain
515423626Trypsin
13313898660Tubulin/FtsZ family, GTPase domain
174271271402038769827Zinc finger, C2H2 type
96107064556062417Zinc finger, C3HC4 type (RING finger)
18272145702319223Zinc knuckle
753655334Protein-tyrosine phosphatase
49354545332771305short chain dehydrogenase
46252829232334208Zinc-binding dehydrogenase
9661055647Thiolase, N-terminal domain
322322216Beta-ketoacyl synthase, N-terminal domain
5144442242Fe-2S iron-sulfur cluster binding domain
323222115Enolase, C-terminal TIM barrel domain
11Cytochrome C and Quinol oxidase polypeptide I
112Cytochrome C oxidase subunit II, periplasmic domain
1310119109870Glutamine amidotransferase class-I
1512131115111188TCP-1/cpn60 chaperonin family
11ATP synthase A chain
957565441Glutamine synthetase, catalytic domain
21111118Triosephosphate isomerase
49332630262625215E1-E2 ATPase
2114241420149116Core histone H2A/H2B/H3/H4
11Copper binding proteins, plastocyanin/azurin family
213111615Alpha amylase, catalytic domain
17101447111073Phorbol esters/diacylglycerol binding domain (C1 domain)
8688581053Bacterial transferase hexapeptide (six repeats)
664444432tRNA synthetases class I (I, L, M and V)
18152118182016126Cyclin, N-terminal domain
22311615Carboxylesterase family
554544532DNA polymerase family B
833544431ATP synthase subunit C
1111116Legume lectin domain
432423220Peroxidase
114Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
11311411Beta-lactamase
123241215C-5 cytosine-specific DNA methylase
1113NADH dehydrogenase
49303937343329251Calcineurin-like phosphoesterase
555344834Cellulase (glycosyl hydrolase family 5)
856666643tRNA synthetases class II (D, K and N)
80566663545245416Mitochondrial carrier protein
27172120201815138Aminotransferase class I and II
14413131110974Phosphoribosyl transferase domain
15141515141611100Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
11221119Phosphoglycerate kinase
334333322Ribosomal protein S4/S9 N-terminal domain
444444327Ribosomal protein S12/S23
22Bacterial regulatory helix-turn-helix proteins, AraC family
121221110Chaperonin 10 Kd subunit
36173223222019169C2 domain
85327944485345386PH domain
48313228192613197bZIP transcription factor
20142515121213111Aldehyde dehydrogenase family
92438046475260420Fungal Zn(2)-Cys(6) binuclear cluster domain
60314241393730280Cytochrome b5-like Heme/Steroid binding domain
223211213Oxidoreductase molybdopterin binding domain
19141716131314106Oxidoreductase NAD-binding domain
26212420202221154SNF2 family N-terminal domain
445433326Ribosomal protein S7p/S5e
26182322202220151Ubiquitin-conjugating enzyme
11710887657Isocitrate/isopropylmalate dehydrogenase
644544431Ribosomal Proteins L2, RNA binding domain
545444329Hsp90 protein
422362221Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
222222214Dihydrofolate reductase
448612328Cysteine-rich secretory protein family
544543227Ribosomal protein S3, C-terminal domain
6556444342-oxoacid dehydrogenases acyltransferase (catalytic domain)
753423327Catalase
632322321Disintegrin
201051017558UDP-glucoronosyl and UDP-glucosyl transferase
865665541Aminotransferase class-III
754443330Ribosomal protein S19
11111117DNA gyrase B
742633328Thiamine pyrophosphate enzyme, central domain
444443427Lyase
523333322Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
122222415Ferritin-like domain
423222116Adenylate and Guanylate cyclase catalytic domain
21211119ATP synthase delta (OSCP) subunit
11111117Orotidine 5'-phosphate decarboxylase / HUMPS family
21111118Indole-3-glycerol phosphate synthase
434333222Pyruvate kinase, barrel domain
36262928202818185Kinesin motor domain
45323539343730252DnaJ domain
17141414141413100Proteasome subunit
122221414Major intrinsic protein
22122110ATP synthase
22Glycosyl hydrolase family 1
12688663493'5'-cyclic nucleotide phosphodiesterase
11111218Profilin
544454228Ribosomal protein L22p/L17e
434333323Ribosomal protein L14p/L23e
31202322232120160Ubiquitin family
778646644Cofilin/tropomyosin-type actin-binding protein
63633432814-3-3 protein
535433225Alkaline phosphatase
22Zinc carboxypeptidase
42152926201828178Aldo/keto reductase family
39183723203325195Myb-like DNA-binding domain
14101010106767Forkhead domain
11125Glycosyl hydrolases family 32 N-terminal domain
141111110Ribosomal protein L16p/L10e
534443326Ribosomal protein S14p/S29e
957665745FKBP-type peptidyl-prolyl cis-trans isomerase
222122112Glutathione peroxidase
54534324
21101715131114101Flavodoxin
11112118Calreticulin family
966755745Aminotransferase class-V
312311112Ribonucleotide reductase, small chain
52525148474745342DEAD/DEAH box helicase
99778881747775571Helicase conserved C-terminal domain
21111118EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
534433325Ribosomal protein L23
313111111Pyridoxal-dependent decarboxylase, C-terminal sheet domain
544354328Ribosomal protein L5
644453632Pyridoxal-dependent decarboxylase conserved domain
222121111Citrate synthase, C-terminal domain
766666643GHMP kinases N terminal domain
1271111118868Biotin carboxylase, N-terminal domain
11111117Tryptophan synthase alpha chain
129910991169Pyridoxal-phosphate dependent enzyme
11'Paired box' domain
26171823162015135NUDIX domain
1066766647pfkB family carbohydrate kinase
565297337Glycosyl hydrolases family 28
542433223Ribosomal protein L3
634454430Ribosomal protein L11, RNA binding domain
138111111101074Histidine phosphatase superfamily (branch 1)
11111117Thymidylate synthase
11889127762ATP synthase alpha/beta chain, C terminal domain
1371612912877Calponin homology (CH) domain
11Bacterial dnaA protein
10391266551Glutamine amidotransferases class-II
334323321Ribosomal protein S15
213221213'Cold-shock' DNA-binding domain
738454435Thaumatin family
1111116Fructose-1-6-bisphosphatase, N-terminal domain
523423221Ribonucleotide reductase, all-alpha domain
753443329Ribosomal protein S2
148131079667SRF-type transcription factor (DNA-binding and dimerisation domain)
65364336353922276GATA zinc finger
3571921191825144Amino acid permease
975666847Prolyl oligopeptidase family
646554131Ribosomal protein L30p/L7e
645524531Histidine phosphatase superfamily (branch 2)
21211119Respiratory-chain NADH dehydrogenase, 30 Kd subunit
646655638Aconitase family (aconitate hydratase)
11Glycosyl hydrolase family 10
424313522Glycosyl hydrolases family 17
545453329Ribosomal protein S5, N-terminal domain
654645333Nucleoside diphosphate kinase
746653435Tetraspanin family
333333220Ribosomal protein S10p/S20e
46292522222020184Arrestin (or S-antigen), N-terminal domain
11311119Phosphoglucose isomerase
3222110Carbohydrate phosphorylase
422222115SecY translocase
11111117Respiratory-chain NADH dehydrogenase, 49 Kd subunit
434343324Ribosomal protein L6
655545333Polyprenyl synthetase
1710121178873Hexokinase
998787654Dynamin family
11111117Biopterin-dependent aromatic amino acid hydroxylase
312221112Transcription factor TFIID (or TATA-binding protein, TBP)
545554432Rieske [2Fe-2S] domain
246Proton-conducting membrane transporter
159131210101079Biotin-requiring enzyme
422222216Phosphofructokinase
322222215Ribosomal protein S17
223312114Hydroxymethylglutaryl-coenzyme A reductase
965666543FGGY family of carbohydrate kinases, N-terminal domain
31321111Sodium:dicarboxylate symporter family
178141411121288Enoyl-CoA hydratase/isomerase
533444326Ribosomal protein S9/S16
332332319Transcription factor TFIIB repeat
10410946750Cytidine and deoxycytidylate deaminase zinc-binding region
21112119Molybdopterin oxidoreductase
231215922186105Chromo (CHRromatin Organisation MOdifier) domain
636555535D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
736545333Malic enzyme, N-terminal domain
11PEP-utilising enzyme, mobile domain
3123221146-phosphogluconate dehydrogenase, C-terminal domain
768553539Multicopper oxidase
26131687131295WW domain
333333321Ribosomal RNA adenine dimethylase
2041551711581621571451,152WD domain, G-beta repeat
11Calponin family repeat
554543430Heavy-metal-associated domain
845655437Adenylate kinase
233222216Phosphoglucomutase/phosphomannomutase, C-terminal domain
524333222Ribosomal protein S8
433433323Ribosomal protein S11
19161213141512101LIM domain
353144424Regulator of chromosome condensation (RCC1) repeat
434424324Ribosomal protein S13/S18
2111117Tau and MAP protein, tubulin-binding repeat
11NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
422222216chorismate binding enzyme
158987755960s Acidic ribosomal protein
434444427Prenyltransferase and squalene oxidase repeat
17914911101080Protein kinase C terminal domain
11Spectrin repeat
11111117Single-strand binding protein family
21111118S-adenosylmethionine synthetase, N-terminal domain
23171720141812121Bromodomain
21152015161712116Acyl-CoA dehydrogenase, C-terminal domain
27192326212219157Ubiquitin carboxyl-terminal hydrolase
1111116Ribosomal protein L36
222143317Ribonuclease T2 family
29182420141412131HSF-type DNA-binding
222222214SRP54-type protein, GTPase domain
311221111Urease alpha-subunit, N-terminal domain
749574339Serine carboxypeptidase
151310131012982Phosphatidylinositol 3- and 4-kinase
623222219Transketolase, thiamine diphosphate binding domain
1111127WHEP-TRS domain
222222214Inositol monophosphatase family
8681056649Glutaredoxin
422212215Isocitrate lyase family
222222214Serine hydroxymethyltransferase
21111118Iron-containing alcohol dehydrogenase
341423118Ribosomal protein L10
14851086758KOW motif
11111117Ribosomal protein L34
11114Ribosomal protein L33
333323219RF-1 domain
111115Sodium:solute symporter family
21111118Imidazoleglycerol-phosphate dehydratase
11111117DNA polymerase family A
311211110IMP dehydrogenase / GMP reductase domain
524332221Glucose-6-phosphate dehydrogenase, NAD binding domain
17911101111675Protein phosphatase 2C
767646541Nucleotidyl transferase
312221112Carbonic anhydrase
332212215Phosphoribulokinase / Uridine kinase family
13778167664Fatty acid desaturase
667766644MutS domain V
11121118Delta-aminolevulinic acid dehydratase
335232321Arginase family
666666642MCM P-loop domain
353343223Squalene/phytoene synthase
29162517181514134FHA domain
112NADH-ubiquinone/plastoquinone oxidoreductase chain 6
57274737363025259AMP-binding enzyme
1791412108979G-protein alpha subunit
31213321231916164HMG (high mobility group) box
11NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
11Cytochrome c oxidase subunit III
157187881275His Kinase A (phospho-acceptor) domain
199810108771Armadillo/beta-catenin-like repeat
57204436313736261Tetratricopeptide repeat
1859874859Ion transport protein
11111117DNA gyrase/topoisomerase IV, subunit A
13611106121270BRCA1 C Terminus (BRCT) domain
9610987756Glycosyl transferases group 1
825453633Glycosyl transferase family 2
964237334SAM domain (Sterile alpha motif)
22311312linker histone H1 and H5 family
1121117Ribosomal protein L7/L12 C-terminal domain
311221111Urease, gamma subunit
736433329CoA-ligase
948884647Phosphopantetheine attachment site
222222214Formyl transferase
11Cellulose binding domain
1613131514151298Metallopeptidase family M24
45103533332726209Leucine Rich Repeat
3353025231632164alpha/beta hydrolase fold
434333323RNA polymerase Rpb2, domain 6
179178108877PB1 domain
222222214Staphylococcal nuclease homologue
45263227292220201Rab-GTPase-TBC domain
11111117Tudor domain
322211213WH1 domain
966555743Zinc finger, ZZ type
221211211HRDC domain
24161718181514122CBS domain
644354228Ribosomal protein L13
534443225Ribosomal protein L4/L1 family
11111117Clp protease
445334528S1 RNA binding domain
11111117HIUase/Transthyretin family
856555741AhpC/TSA family
444444428tRNA synthetases class I (W and Y)
112116UvrD/REP helicase N-terminal domain
911118871064Rhodanese-like domain
1799121291078Universal stress protein family
49243343272839243Acetyltransferase (GNAT) family
11112118SecE/Sec61-gamma subunits of protein translocation complex
11111117C-terminal regulatory domain of Threonine dehydratase
222222214AIR synthase related protein, N-terminal domain
129121111121178tRNA synthetase class II core domain (G, H, P, S and T)
333333321SpoU rRNA Methylase family
333332320Tetrapyrrole (Corrin/Porphyrin) Methylases
11111117Glycosyl transferase family, a/b domain
11114PDZ domain
222222214Class II Aldolase and Adducin N-terminal domain
22Adenoviral fibre protein (repeat/shaft region)
112Diacylglycerol kinase accessory domain
1288668452Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
121010128101173Fes/CIP4, and EFC/F-BAR homology domain
12414989662IQ calmodulin-binding motif
333333220Phosphoinositide 3-kinase family, accessory domain (PIK domain)
1567887556Phospholipase D Active site motif
121678107464Regulator of G protein signaling domain
1399101010667GTPase-activator protein for Ras-like GTPase
32172017181911134RasGEF domain
23121491011685RasGEF N-terminal motif
49313833293123234RhoGAP domain
51314131282722231RhoGEF domain
121113121011877SPRY domain
435333324RNA polymerase Rpb1, domain 2
11111117Guanylate kinase
869785649Gelsolin repeat
22141613151819117UBA/TS-N domain
38233123263128200PHD-finger
242334422GGL domain
131111109101074HECT-domain (ubiquitin-transferase)
11121219Helix-hairpin-helix motif
11BRCA2 repeat
225122519MSP (Major sperm protein) domain
313323318Ribonuclease III domain
363222220Region in Clathrin and VPS
422222216RanBP1 domain
312222214PPIC-type PPIASE domain
444244426Zn-finger in Ran binding protein and others
27192717142121146Zinc finger C-x8-C-x5-C-x3-H type (and similar)
11215B-box zinc finger
1111127Poly(ADP-ribose) polymerase catalytic domain
211116Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
185101041052027668750F-box domain
412221113Elongation factor 1 gamma, conserved domain
11111117Calpain family cysteine protease
966676444Copper fist DNA binding domain
1610101087768CRAL/TRIO domain
2114177311213115BTB/POZ domain
1691178131074Ricin-type beta-trefoil lectin domain
1111116Inhibitor of Apoptosis domain
323222216Voltage gated chloride channel
643554128Caspase domain
14131015891180GDSL-like Lipase/Acylhydrolase
1069255441Poly-adenylate binding protein, unique domain
111115POLO box duplicated region
11NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
31172925241116153ABC transporter transmembrane region
1427Integrase core domain
9810897859FAD binding domain
21311210Condensation domain
21111118S-adenosyl-L-homocysteine hydrolase, NAD binding domain
828332228HAMP domain
545454330ribosomal L5P family C-terminus
1387798759Insulinase (Peptidase family M16)
749644539Dehydrogenase E1 component
11111117Lumazine binding domain
978778753Elongation factor G C-terminus
647664538HMGL-like
766765542DnaJ central domain
11Starch binding domain
443333121Ribosomal protein L1p/L10e family
22141413131212100Cation transporting ATPase, C-terminus
32181518151617131Cation transporter/ATPase, N-terminus
1111116dUTPase
646655638Aconitase C-terminal domain
966775545Amino acid kinase family
21111118N-(5'phosphoribosyl)anthranilate (PRA) isomerase
422322116Acyl transferase domain
311221111Urease beta subunit
323312216Dihydrodipicolinate synthetase family
70234149423640301haloacid dehalogenase-like hydrolase
11Glycosyl hydrolases family 2
221211148111492Glycosyl hydrolases family 18
11111117Proliferating cell nuclear antigen, N-terminal domain
111115Translation initiation factor IF-3, C-terminal domain
11111117Adenylosuccinate synthetase
11111117Asparaginase, N-terminal
433334323Peptidase S24-like
445444227Inorganic pyrophosphatase
1010Subtilisin inhibitor-like
22Virus coat protein (TMV like)
1176647950Glycosyl hydrolases family 16
564333327Glycosyl hydrolases family 15
27118121710691NADH:flavin oxidoreductase / NADH oxidase family
2222222143-hydroxyacyl-CoA dehydrogenase, C-terminal domain
634444833Glycosyl hydrolase family 20, catalytic domain
444434326HhH-GPD superfamily base excision DNA repair protein
11111117AIR carboxylase
951553432GMC oxidoreductase
523723325Asparagine synthase
23113616Fungal cellulose binding domain
22142214161410112Septin
222242216EF-1 guanine nucleotide exchange domain
311211110Homoserine dehydrogenase
21115Flavin-binding monooxygenase-like
333333321tRNA synthetases class I (E and Q), catalytic domain
433333120tRNA synthetases class I (R)
777454640XPG N-terminal domain
148141211131284Metallo-beta-lactamase superfamily
11111128F5/8 type C domain
1165646442Choline/Carnitine o-acyltransferase
1111116Putative esterase
724423426Glycosyl hydrolase family 9
11111117Ferrochelatase
433434324Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
31111119Arginosuccinate synthase
2111117Electron transfer flavoprotein FAD-binding domain
13710988762RNB domain
19121412119683CNH domain
634545431Diacylglycerol kinase catalytic domain
151412121391186Dual specificity phosphatase, catalytic domain
22221211MyTH4 domain
1410125891169P21-Rho-binding domain
40293023252621194PX domain
12710546650Ras association (RalGDS/AF-6) domain
897767549UBX domain
1477777756VHS domain
11111117Phosphoinositide 3-kinase C2
644433327DAHP synthetase I family
757655843Carbon-nitrogen hydrolase
11N-acetyltransferase
11111117Prephenate dehydratase
14761177658Syntaxin
151013149111183Pumilio-family RNA binding repeat
767668646Histone-like transcription factor (CBF/NF-Y) and archaeal histone
222222214Pterin binding enzyme
423221115ER lumen protein retaining receptor
222212213Glycoprotease family
11111117Histidinol dehydrogenase
433333322impB/mucB/samB family
11Ribonuclease P
46333221
534333223Ribosomal L15
564343227Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
11111117Ribosomal prokaryotic L21 protein
11111117Ribosomal L28 family
534332222Ribosomal L29 protein
223323217Ribosomal L39 protein
513222217Ribosomal S17
11111117Ribulose-phosphate 3 epimerase family
11111117Translationally controlled tumour protein
323314117RNA pseudouridylate synthase
859876548Histone deacetylase domain
2122119Glycosyltransferase family 10 (fucosyltransferase) C-term
835634433POT family
621122317PWWP domain
26242124172216150SET domain
14441026545Isochorismatase family
1055666442Permease family