PFAM Domains • Penicillium swiecickii 182 6C1 v1.0
Annotations/GenomesPenex1Penexp1Penita1Penla1Penpol1Pensol1Pensoli1Penswi1Penth1TotalAnnotation Description
PFAMs
9,96211,79910,0009,09711,18912,18012,10712,8229,50998,665
111147 transmembrane receptor (rhodopsin family)
444138403737383942356ATPase family associated with various cellular activities (AAA)
727452517177787663614ABC transporter
45444554439ATP synthase alpha/beta family, nucleotide-binding domain
141515131115141614127Elongation factor Tu GTP binding domain
12910101010991089Helix-loop-helix DNA-binding domain
44444346437Hsp20/alpha crystallin family
799612101110983Hsp70 protein
85684566856KH domain
1113Ribulose bisphosphate carboxylase large chain, catalytic domain
1113SH2 domain
231616231413161524160SH3 domain
101010891010101087Actin
9536174533453352139495Ankyrin repeat
111131513PAN domain
78888787869ADP-ribosylation factor family
910978101110781Eukaryotic aspartyl protease
44444444436Cyclic nucleotide-binding domain
11Cytochrome b(C-terminal)/b6/petD
112Cytochrome b/b6/petB
11111111210Cytochrome c
111148Double-stranded RNA binding motif
152161111652EF hand
111111174Fe-4S binding domain
11221111111Fibronectin type III domain
11131222215Globin
201914121811152218149Glutathione S-transferase, C-terminal domain
22121111112Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
21121119Hemopexin
74474444745Homeodomain
22233334325lactate/malate dehydrogenase, NAD binding domain
45555454441Myosin head (motor domain)
1231257810899109106134103985Cytochrome P450
1131171611051321241341521401,178Protein kinase domain
191511191316151716141Pyridine nucleotide-disulphide oxidoreductase
242424212425242525216Ras family
192020181718192718176Response regulator receiver domain
35816837647RNase H
635455635156565666520RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
4851229Reverse transcriptase (RNA-dependent DNA polymerase)
22231222218Copper/zinc superoxide dismutase (SODC)
22222222218Iron/manganese superoxide dismutases, alpha-hairpin domain
8108376910667Subtilase family
114120721121081371351161101,024Sugar (and other) transporter
101091210911121194Thioredoxin
1122141214Trypsin
44544446540Tubulin/FtsZ family, GTPase domain
1124von Willebrand factor type A domain
881614702125272987377Zinc finger, C2H2 type
364539455541144Zinc finger, C3HC4 type (RING finger)
33421731327Zinc knuckle
32222222320Protein-tyrosine phosphatase
158136871251281401391371411,191short chain dehydrogenase
1099463756796859588772Zinc-binding dehydrogenase
77656766757Thiolase, N-terminal domain
393527323232284431300Beta-ketoacyl synthase, N-terminal domain
422422324252Fe-2S iron-sulfur cluster binding domain
22312221318Enolase, C-terminal TIM barrel domain
11Cytochrome C and Quinol oxidase polypeptide I
11Cytochrome C oxidase subunit II, periplasmic domain
910912101111101092Glutamine amidotransferase class-I
910101010910101088TCP-1/cpn60 chaperonin family
11ATP synthase A chain
33474356641Glutamine synthetase, catalytic domain
22222222218Triosephosphate isomerase
182221192124222320190E1-E2 ATPase
77777777864Core histone H2A/H2B/H3/H4
141313151315161615130Alpha amylase, catalytic domain
22233222220Phorbol esters/diacylglycerol binding domain (C1 domain)
1211111210111091096Bacterial transferase hexapeptide (six repeats)
35535555339tRNA synthetases class I (I, L, M and V)
78878888769Cyclin, N-terminal domain
363515182233342722242Carboxylesterase family
44444444436DNA polymerase family B
66434556443ATP synthase subunit C
43333443330Peroxidase
13146151516141816127Beta-lactamase
22222222218C-5 cytosine-specific DNA methylase
342727302527252932256Calcineurin-like phosphoesterase
11138101615151410112Cellulase (glycosyl hydrolase family 5)
77886778967tRNA synthetases class II (D, K and N)
383738403644434340359Mitochondrial carrier protein
112recA bacterial DNA recombination protein
292819342431323323253Aminotransferase class I and II
95573554952Phosphoribosyl transferase domain
912121081211101296Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1111111119Phosphoglycerate kinase
12212222115Ribosomal protein S4/S9 N-terminal domain
22222222218Ribosomal protein S12/S23
2212222215Bacterial regulatory helix-turn-helix proteins, AraC family
11111117Chaperonin 10 Kd subunit
119912799101187C2 domain
1610101710109915106PH domain
711111011121217697bZIP transcription factor
384126353338363735319Aldehyde dehydrogenase family
4071471123492912563813923132,648Fungal Zn(2)-Cys(6) binuclear cluster domain
313023283234323731278Cytochrome b5-like Heme/Steroid binding domain
33232223323Oxidoreductase molybdopterin binding domain
221813231618182120169Oxidoreductase NAD-binding domain
293325233332282725255SNF2 family N-terminal domain
22222222218Ribosomal protein S7p/S5e
202122191820212120182Ubiquitin-conjugating enzyme
99787888872Isocitrate/isopropylmalate dehydrogenase
22222222218Ribosomal Proteins L2, RNA binding domain
1111111119Hsp90 protein
22221222217Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
111111118Dihydrofolate reductase
53234373232Chitin recognition protein
22221222217Cysteine-rich secretory protein family
1111111119Ribosomal protein S3, C-terminal domain
46335443436Cupin
22232222219Annexin
11114Eukaryotic-type carbonic anhydrase
11211118Chalcone and stilbene synthases, N-terminal domain
442344443322-oxoacid dehydrogenases acyltransferase (catalytic domain)
87545576855Catalase
1111111119Disintegrin
2524557131UDP-glucoronosyl and UDP-glucosyl transferase
11118999911986Aminotransferase class-III
22211222216Ribosomal protein S19
1111111119DNA gyrase B
1112687101011883Thiamine pyrophosphate enzyme, central domain
55432444334Lyase
22222222218Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
1111111119Sodium:neurotransmitter symporter family
11136Ferritin-like domain
111111118Adenylate and Guanylate cyclase catalytic domain
1111111119ATP synthase delta (OSCP) subunit
1111111119Orotidine 5'-phosphate decarboxylase / HUMPS family
1111111119Indole-3-glycerol phosphate synthase
2212114114Aromatic amino acid lyase
1111111119Pyruvate kinase, barrel domain
11111011101111111197Kinesin motor domain
262727272427272728240DnaJ domain
141414141212141414122Proteasome subunit
66564666550Major intrinsic protein
1111111119ATP synthase
66334445338Glycosyl hydrolase family 1
11111111193'5'-cyclic nucleotide phosphodiesterase
31132224220Profilin
12222222116Ribosomal protein L22p/L17e
22222222218Ribosomal protein L14p/L23e
898991188979Ubiquitin family
77765676758Cofilin/tropomyosin-type actin-binding protein
2332333322414-3-3 protein
32242222423Alkaline phosphatase
11111221212Zinc carboxypeptidase
454529344342454037360Aldo/keto reductase family
15561655561477Myb-like DNA-binding domain
44544444437Forkhead domain
44497446749Glycosyl hydrolases family 32 N-terminal domain
13313333121Ribosomal protein L16p/L10e
21122222216Ribosomal protein S14p/S29e
44444444436FKBP-type peptidyl-prolyl cis-trans isomerase
1111111119Glutathione peroxidase
2226
88777678664Flavodoxin
1111111119Calreticulin family
56356455241Common central domain of tyrosinase
11119898913987Aminotransferase class-V
1111111119Ribonucleotide reductase, small chain
404747404747444638396DEAD/DEAH box helicase
757773707879737373671Helicase conserved C-terminal domain
11111112211EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
22222222218Ribosomal protein L23
33222222220Pyridoxal-dependent decarboxylase, C-terminal sheet domain
111111118Ribosomal protein L5
78666897764Pyridoxal-dependent decarboxylase conserved domain
34435444334Citrate synthase, C-terminal domain
66554656750GHMP kinases N terminal domain
88599979771Biotin carboxylase, N-terminal domain
22232222219Tryptophan synthase alpha chain
141515161618161815143Pyridoxal-phosphate dependent enzyme
151516151315141619138NUDIX domain
76787777662pfkB family carbohydrate kinase
99751110107876Glycosyl hydrolases family 28
18717777146Luciferase-like monooxygenase
22221222217Ribosomal protein L3
22222222218Ribosomal protein L11, RNA binding domain
161812151414141314130Histidine phosphatase superfamily (branch 1)
1111111119Thymidylate synthase
112116Lipoxygenase
44444554438ATP synthase alpha/beta chain, C terminal domain
54445555542Calponin homology (CH) domain
54352333432Glutamine amidotransferases class-II
22222222218Ribosomal protein S15
111111118Fructose-1-6-bisphosphatase, N-terminal domain
1111111119Ribonucleotide reductase, all-alpha domain
22222222218Ribosomal protein S2
23412324627SRF-type transcription factor (DNA-binding and dimerisation domain)
77747877963GATA zinc finger
723025622732312963371Amino acid permease
56636779453Prolyl oligopeptidase family
22222222218Ribosomal protein L30p/L7e
1011811101112121297Histidine phosphatase superfamily (branch 2)
1111111119Respiratory-chain NADH dehydrogenase, 30 Kd subunit
34465656443Aconitase family (aconitate hydratase)
33134544330Glycosyl hydrolase family 10
41231111519Glycosyl hydrolases family 17
11111112110Ribosomal protein S5, N-terminal domain
1111111119Nucleoside diphosphate kinase
11Tetraspanin family
22111111111Galactoside-binding lectin
22222222218Ribosomal protein S10p/S20e
63465456645Arrestin (or S-antigen), N-terminal domain
1111111119Phosphoglucose isomerase
1111111119Carbohydrate phosphorylase
1111111119SecY translocase
1111111119Respiratory-chain NADH dehydrogenase, 49 Kd subunit
22221222217Ribosomal protein L6
444876711758Polyprenyl synthetase
65566666652Hexokinase
913117101410179100Dynamin family
1111111119Transcription factor TFIID (or TATA-binding protein, TBP)
988999881078Rieske [2Fe-2S] domain
1221222214Phytochrome region
235Proton-conducting membrane transporter
91061011111010885Biotin-requiring enzyme
1111111119Phosphofructokinase
1111111119Ribosomal protein S17
22132435224Hydroxymethylglutaryl-coenzyme A reductase
55544555543FGGY family of carbohydrate kinases, N-terminal domain
2114Hemocyanin, copper containing domain
11Prion/Doppel alpha-helical domain
14139141315131412117Enoyl-CoA hydratase/isomerase
22222222218Ribosomal protein S9/S16
22222222218Transcription factor TFIIB repeat
86686777863Cytidine and deoxycytidylate deaminase zinc-binding region
11111111210Molybdopterin oxidoreductase
56444644441Chromo (CHRromatin Organisation MOdifier) domain
22222222218Phosphatidylinositol-specific phospholipase C, Y domain
24423444229Phosphatidylinositol-specific phospholipase C, X domain
995810111211984D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
22222222218Malic enzyme, N-terminal domain
223232234236-phosphogluconate dehydrogenase, C-terminal domain
997117101112783Multicopper oxidase
87897698870WW domain
1111111119Ribosomal RNA adenine dimethylase
113110102106991121151171271,001WD domain, G-beta repeat
65555556547Heavy-metal-associated domain
33333334328Adenylate kinase
23322233222Phosphoglucomutase/phosphomannomutase, C-terminal domain
22221222217Ribosomal protein S8
12212222115Ribosomal protein S11
34234433329LIM domain
13222333120Regulator of chromosome condensation (RCC1) repeat
22121122215Ribosomal protein S13/S18
112NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
22232322321chorismate binding enzyme
3333333332760s Acidic ribosomal protein
54444644540Prenyltransferase and squalene oxidase repeat
74464444744Protein kinase C terminal domain
1111111119Single-strand binding protein family
22111121112S-adenosylmethionine synthetase, N-terminal domain
88786888768Bromodomain
13149141116141410115Acyl-CoA dehydrogenase, C-terminal domain
141514151415151515132Ubiquitin carboxyl-terminal hydrolase
1111111119Ribosomal protein L36
22221222217Ribonuclease T2 family
11Gonadotropin-releasing hormone
33232335327HSF-type DNA-binding
22222222218SRP54-type protein, GTPase domain
11222221215Urease alpha-subunit, N-terminal domain
111110912131210997Serine carboxypeptidase
67777777762Phosphatidylinositol 3- and 4-kinase
32244434531Transketolase, thiamine diphosphate binding domain
11122121314Glycosyl hydrolases family 11
44444445437Inositol monophosphatase family
44443444435Glutaredoxin
52252222527Isocitrate lyase family
22222222218Serine hydroxymethyltransferase
33332334327Iron-containing alcohol dehydrogenase
22222222218Ribosomal protein L10
42252222425KOW motif
1111116Ribosomal protein L34
22322233221RF-1 domain
33233444329Sodium:solute symporter family
1111111119Imidazoleglycerol-phosphate dehydratase
111111118DNA polymerase family A
22221222217IMP dehydrogenase / GMP reductase domain
1111111119Glucose-6-phosphate dehydrogenase, NAD binding domain
87676777762Protein phosphatase 2C
23323333224Nucleotidyl transferase
43222434226Carbonic anhydrase
3311232217Phosphoribulokinase / Uridine kinase family
810997101015785Fatty acid desaturase
66666666654MutS domain V
22121111112Delta-aminolevulinic acid dehydratase
56355544340Arginase family
66665666653MCM P-loop domain
1223223116Squalene/phytoene synthase
8101091010109985FHA domain
707044697270688274619AMP-binding enzyme
33433333732G-protein alpha subunit
64565564647HMG (high mobility group) box
11NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
161615131314152412138His Kinase A (phospho-acceptor) domain
33333333327Armadillo/beta-catenin-like repeat
251212331114141128160Tetratricopeptide repeat
1111111119Ion transport protein
1111111119DNA gyrase/topoisomerase IV, subunit A
11771188881280BRCA1 C Terminus (BRCT) domain
129912989101189Glycosyl transferases group 1
42241222423Glycosyl transferase family 2
11111121110SAM domain (Sterile alpha motif)
1111111119linker histone H1 and H5 family
1111111119Ribosomal protein L7/L12 C-terminal domain
44344444435Pectate lyase
22111111111ribonuclease
11222221215Urease, gamma subunit
55556555546CoA-ligase
465834426349506741450Phosphopantetheine attachment site
33343443431Formyl transferase
111111101212121213104Metallopeptidase family M24
13441244341361Leucine Rich Repeat
386729788932144alpha/beta hydrolase fold
33323333326RNA polymerase Rpb2, domain 6
44443444435PB1 domain
22222222218Staphylococcal nuclease homologue
121212121112121211106Rab-GTPase-TBC domain
1111111119Tudor domain
1111111119WH1 domain
55444444438Zinc finger, ZZ type
22222222218HRDC domain
1087107888975CBS domain
22222222218Ribosomal protein L13
22222222218Ribosomal protein L4/L1 family
1111111119Clp protease
34433444332S1 RNA binding domain
1111111119HIUase/Transthyretin family
33332334428AhpC/TSA family
44454444437tRNA synthetases class I (W and Y)
1222222114UvrD/REP helicase N-terminal domain
39839101010567Rhodanese-like domain
22222222218Universal stress protein family
443126432631333444312Acetyltransferase (GNAT) family
1111111119SecE/Sec61-gamma subunits of protein translocation complex
1111111119C-terminal regulatory domain of Threonine dehydratase
22222222218AIR synthase related protein, N-terminal domain
87777788867tRNA synthetase class II core domain (G, H, P, S and T)
1111111119SpoU rRNA Methylase family
22222222218Tetrapyrrole (Corrin/Porphyrin) Methylases
1111111119Glycosyl transferase family, a/b domain
1113PDZ domain
87554765552Class II Aldolase and Adducin N-terminal domain
34433444534Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
55554555544Fes/CIP4, and EFC/F-BAR homology domain
41141111418IQ calmodulin-binding motif
22222222218Phosphoinositide 3-kinase family, accessory domain (PIK domain)
53343333431Phospholipase D Active site motif
14514448334Regulator of G protein signaling domain
33322333325GTPase-activator protein for Ras-like GTPase
56656666551RasGEF domain
55555555545RasGEF N-terminal motif
87866786763RhoGAP domain
66666666755RhoGEF domain
22221222217SPRY domain
33333333327RNA polymerase Rpb1, domain 2
11121223215Guanylate kinase
34444554538Gelsolin repeat
75676644752UBA/TS-N domain
171311171414141417131PHD-finger
111111118GGL domain
56666666653HECT-domain (ubiquitin-transferase)
111111118Helix-hairpin-helix motif
1111111119MSP (Major sperm protein) domain
645746661054Ribonuclease III domain
34434344332Region in Clathrin and VPS
23313322221RanBP1 domain
2112111211PPIC-type PPIASE domain
31232222320Zn-finger in Ran binding protein and others
157819101110918107Zinc finger C-x8-C-x5-C-x3-H type (and similar)
34333333328Poly(ADP-ribose) polymerase catalytic domain
111111118Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
597650131112858224F-box domain
1111111119Elongation factor 1 gamma, conserved domain
22222222218Calpain family cysteine protease
3122233319Copper fist DNA binding domain
785878881170CRAL/TRIO domain
81111214101115991BTB/POZ domain
11Ricin-type beta-trefoil lectin domain
111111118Inhibitor of Apoptosis domain
33333333327Voltage gated chloride channel
33322332324Caspase domain
105253775650GDSL-like Lipase/Acylhydrolase
1111111119Poly-adenylate binding protein, unique domain
11NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
404026223737424031315ABC transporter transmembrane region
12111015Integrase core domain
88787678665FAD binding domain
303012182922222325211Condensation domain
1111111119S-adenosyl-L-homocysteine hydrolase, NAD binding domain
22222224220HAMP domain
22222122217ribosomal L5P family C-terminus
66666666553Insulinase (Peptidase family M16)
44444444335Dehydrogenase E1 component
1111111119Lumazine binding domain
66655666652Elongation factor G C-terminus
44445654440HMGL-like
34444444435DnaJ central domain
33133333325Starch binding domain
33333333327Ribosomal protein L1p/L10e family
1010811101110101090Cation transporting ATPase, C-terminus
121312121314131215116Cation transporter/ATPase, N-terminus
2222