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PFAM Domains • Fusarium oxysporum F10-08 v1.0
Annotations/GenomesFoxF1003_1FoxF1004_1FoxF1008_1FoxF1010_1FoxF201_1FoxF202_1FoxF204_1FoxF206_1FoxF207_1Fusox2Fusox32931TotalAnnotation Description
PFAMs
16,14616,91116,63515,88216,64016,54916,65916,42816,31018,71021,912188,782
11111111111117 transmembrane receptor (rhodopsin family)
5545454446467 transmembrane receptor (Secretin family)
5857575656555757576970649ATPase family associated with various cellular activities (AAA)
8483888484908289871091301,010ABC transporter
13181613161515201877158ATP synthase alpha/beta family, nucleotide-binding domain
1615151615151515152530192Elongation factor Tu GTP binding domain
25352427262328242112344400Helix-loop-helix DNA-binding domain
44644656616566Hsp20/alpha crystallin family
1616171517161517181328188Hsp70 protein
7777778772321108KH domain
11SH2 domain
1514131414131313134739208SH3 domain
1111111111111111112926154Actin
50696251565658575722065801Ankyrin repeat
54454444423667PAN domain
1211111111111111111819137ADP-ribosylation factor family
2526262526262725252225278Eukaryotic aspartyl protease
666676766181589Cyclic nucleotide-binding domain
1111111111212Cytochrome c
1111111112213Double-stranded RNA binding motif
22222222230351EF hand
3254Fe-4S binding domain
11111112110Fibronectin type III domain
4444444445445Globin
2120192121222119192321227Glutathione S-transferase, C-terminal domain
1111111111414Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
555555555221178Homeodomain
78117696993614122lactate/malate dehydrogenase, NAD binding domain
11Low-density lipoprotein receptor repeat class B
4444444448852Myosin head (motor domain)
1671791601671651681691691592091941,906Cytochrome P450
1591791691571711711731741763053472,181Protein kinase domain
1919191920201819203726236Pyridine nucleotide-disulphide oxidoreductase
3035323033323322324958386Ras family
2329272327282725274152329Response regulator receiver domain
2243525325134RNase H
525352525355535555118120718RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
213Reverse transcriptase (RNA-dependent DNA polymerase)
4444444443443Copper/zinc superoxide dismutase (SODC)
2222222223324Iron/manganese superoxide dismutases, alpha-hairpin domain
4139383939394040393956449Subtilase family
2031972072032032052042032022252242,276Sugar (and other) transporter
1919191918191819191920208Thioredoxin
3333333335335Trypsin
9141391311101210910120Tubulin/FtsZ family, GTPase domain
11211112220133von Willebrand factor type A domain
38484339464646474820567673Zinc finger, C2H2 type
465454545879138Zinc finger, C3HC4 type (RING finger)
234232334251465Zinc knuckle
2222222224426Protein-tyrosine phosphatase
2252392352252462422452382362762212,628short chain dehydrogenase
1251301271241301291291281271601311,440Zinc-binding dehydrogenase
109111091091091211110Thiolase, N-terminal domain
1616151615161515132117175Beta-ketoacyl synthase, N-terminal domain
55565555586602Fe-2S iron-sulfur cluster binding domain
1111111116621Enolase, C-terminal TIM barrel domain
1111111111111111112225146Glutamine amidotransferase class-I
1010101010101010101514119TCP-1/cpn60 chaperonin family
5555555558760Glutamine synthetase, catalytic domain
1111111112213Triosephosphate isomerase
3435333434353435364654410E1-E2 ATPase
88988789981092Core histone H2A/H2B/H3/H4
1111111111101110101416126Alpha amylase, catalytic domain
1211212213319Phorbol esters/diacylglycerol binding domain (C1 domain)
888878878151297Bacterial transferase hexapeptide (six repeats)
55555555581063tRNA synthetases class I (I, L, M and V)
1016111014121613102722161Cyclin, N-terminal domain
4239444040413942445843472Carboxylesterase family
4444444446648DNA polymerase family B
5555555555656ATP synthase subunit C
66666666612874Peroxidase
2225232224232424232424258Beta-lactamase
3313333222227C-5 cytosine-specific DNA methylase
2725282728282729296146355Calcineurin-like phosphoesterase
2020202020202020201522217Cellulase (glycosyl hydrolase family 5)
777777777131288tRNA synthetases class II (D, K and N)
49554848535553555410097667Mitochondrial carrier protein
111111129recA bacterial DNA recombination protein
3638393536363636364448420Aminotransferase class I and II
56556666515974Phosphoribosyl transferase domain
1010101010101010101617123Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1111111112112Phosphoglycerate kinase
2222222222222Ribosomal protein S4/S9 N-terminal domain
2222222222222Ribosomal protein S12/S23
1111111111111Bacterial regulatory helix-turn-helix proteins, AraC family
1111111111111Chaperonin 10 Kd subunit
1214121313131313123025170C2 domain
8888888883831141PH domain
5764585359555951465047599bZIP transcription factor
6560616659626059606259673Aldehyde dehydrogenase family
6286356485276356466366356388257677,220Fungal Zn(2)-Cys(6) binuclear cluster domain
3640393636383639384547430Cytochrome b5-like Heme/Steroid binding domain
789788888141398Oxidoreductase molybdopterin binding domain
3028272928292929295038346Oxidoreductase NAD-binding domain
3133323133313332325150389SNF2 family N-terminal domain
2222222223324Ribosomal protein S7p/S5e
2121222122212321214237272Ubiquitin-conjugating enzyme
1110111111111111111921138Isocitrate/isopropylmalate dehydrogenase
2212222223424Ribosomal Proteins L2, RNA binding domain
1111111113315Hsp90 protein
2222222223324Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1111111111111Dihydrofolate reductase
8911710911979494Chitin recognition protein
55545555517768Cysteine-rich secretory protein family
1111111111111Ribosomal protein S3, C-terminal domain
8898888887989Cupin
2222222223324Annexin
3333333334334Eukaryotic-type carbonic anhydrase
1111111112213Chalcone and stilbene synthases, N-terminal domain
55655555557582-oxoacid dehydrogenases acyltransferase (catalytic domain)
812128111211111177110Catalase
2222222221221Disintegrin
171516141514151515514155UDP-glucoronosyl and UDP-glucosyl transferase
1717191717171717171921195Aminotransferase class-III
2222222224527Ribosomal protein S19
1111111112213DNA gyrase B
1817161817171716152117189Thiamine pyrophosphate enzyme, central domain
8988888891413101Lyase
2222222226630Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
3333333336336Sodium:neurotransmitter symporter family
111111219Ferritin-like domain
1111111111515Adenylate and Guanylate cyclase catalytic domain
374352541135ATP synthase delta (OSCP) subunit
1111111111111Orotidine 5'-phosphate decarboxylase / HUMPS family
1111111111111Indole-3-glycerol phosphate synthase
4334333322232Aromatic amino acid lyase
1111111113315Pyruvate kinase, barrel domain
1011101110101010101818128Kinesin motor domain
2831302730293030304436345DnaJ domain
1414141414141414142220168Proteasome subunit
66768686611878Major intrinsic protein
1111111113315ATP synthase
6666676666566Glycosyl hydrolase family 1
11111111155193'5'-cyclic nucleotide phosphodiesterase
1111111111111Profilin
2222222221322Ribosomal protein L22p/L17e
2222222222222Ribosomal protein L14p/L23e
1010101010810982213120Ubiquitin family
88888888851087Cofilin/tropomyosin-type actin-binding protein
4854666666137014-3-3 protein
2222222226327Alkaline phosphatase
999999999911101Zinc carboxypeptidase
4748464747464746474846515Aldo/keto reductase family
811108910910122314124Myb-like DNA-binding domain
44544446610960Forkhead domain
128121212121214141612136Glycosyl hydrolases family 32 N-terminal domain
2222222221423Ribosomal protein L16p/L10e
2222222222222Ribosomal protein S14p/S29e
3333333334334FKBP-type peptidyl-prolyl cis-trans isomerase
1111111111111Glutathione peroxidase
22
1313111313141413132622165Flavodoxin
11Protamine P1
1111111111111Calreticulin family
1517161417151716151519176Common central domain of tyrosinase
1011111011111111111213122Aminotransferase class-V
1111111112213Ribonucleotide reductase, small chain
5352505152505248486864588DEAD/DEAH box helicase
90881088786838782831291151,038Helicase conserved C-terminal domain
1111111111111EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
2222222223324Ribosomal protein L23
2222222224224Pyridoxal-dependent decarboxylase, C-terminal sheet domain
1111111112112Ribosomal protein L5
1314151313141413131518155Pyridoxal-dependent decarboxylase conserved domain
4444444443443Citrate synthase, C-terminal domain
55555555591165GHMP kinases N terminal domain
8877777779882Biotin carboxylase, N-terminal domain
1111111111111Tryptophan synthase alpha chain
2021222120202020202123228Pyridoxal-phosphate dependent enzyme
1616161616161616162618188NUDIX domain
778877888151194pfkB family carbohydrate kinase
1111111111111111111514128Glycosyl hydrolases family 28
4444444441542Luciferase-like monooxygenase
3222222225529Ribosomal protein L3
2222222222222Ribosomal protein L11, RNA binding domain
1921201821202120203835253Histidine phosphatase superfamily (branch 1)
1121121113216Thymidylate synthase
2332333332229Lipoxygenase
13181513161515191777155ATP synthase alpha/beta chain, C terminal domain
5465455546655Calponin homology (CH) domain
32333332310540Glutamine amidotransferases class-II
2222222222222Ribosomal protein S15
2222322221121Thaumatin family
2222222223324Fructose-1-6-bisphosphatase, N-terminal domain
1111111111212Ribonucleotide reductase, all-alpha domain
2222222222222Ribosomal protein S2
3333342336235SRF-type transcription factor (DNA-binding and dimerisation domain)
1315121416121711112623170GATA zinc finger
46484546454645464612460597Amino acid permease
999999999812101Prolyl oligopeptidase family
2222222222222Ribosomal protein L30p/L7e
1115141114131413132321162Histidine phosphatase superfamily (branch 2)
1111111111111Respiratory-chain NADH dehydrogenase, 30 Kd subunit
6666666669972Aconitase family (aconitate hydratase)
7557555555559Glycosyl hydrolase family 10
3333333335436Glycosyl hydrolases family 17
2222222222222Ribosomal protein S5, N-terminal domain
1111111111111Nucleoside diphosphate kinase
111111111110Tetraspanin family
2222222221221Ribosomal protein S10p/S20e
88677775613882Arrestin (or S-antigen), N-terminal domain
1111111112213Phosphoglucose isomerase
1111111112213Carbohydrate phosphorylase
1111111112213SecY translocase
1111111111111Respiratory-chain NADH dehydrogenase, 49 Kd subunit
2222222222323Ribosomal protein L6
3333333336942Polyprenyl synthetase
777776766152398Hexokinase
1820171819191919191335216Dynamin family
1111111111111Transcription factor TFIID (or TATA-binding protein, TBP)
1212111212121112121511132Rieske [2Fe-2S] domain
111111111211Phytochrome region
1112121111111111111314128Biotin-requiring enzyme
1111111112213Phosphofructokinase
2222222222222Ribosomal protein S17
26427611528356Hydroxymethylglutaryl-coenzyme A reductase
444454444121665FGGY family of carbohydrate kinases, N-terminal domain
1111111111111Sodium:dicarboxylate symporter family
2124252125232423232327259Enoyl-CoA hydratase/isomerase
2222222222222Ribosomal protein S9/S16
2222222222222Transcription factor TFIIB repeat
88888888891192Cytidine and deoxycytidylate deaminase zinc-binding region
2222222221221Molybdopterin oxidoreductase
1219151214181118134626204Chromo (CHRromatin Organisation MOdifier) domain
8107899977131097Phosphatidylinositol-specific phospholipase C, Y domain
1012910111111991613121Phosphatidylinositol-specific phospholipase C, X domain
1618181617181718183118205D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
2222222222626Malic enzyme, N-terminal domain
13512323311135PEP-utilising enzyme, mobile domain
34534445544456-phosphogluconate dehydrogenase, C-terminal domain
1819181821192018182922220Multicopper oxidase
1112101111111111111215126WW domain
2222222221221Ribosomal RNA adenine dimethylase
11Yeast PIR protein repeat
1211201241201251221251221192001861,484WD domain, G-beta repeat
898899899922108Heavy-metal-associated domain
3443333334437Adenylate kinase
2222222222323Phosphoglucomutase/phosphomannomutase, C-terminal domain
2222222222323Ribosomal protein S8
2222222222323Ribosomal protein S11
5555555555656LIM domain
413111111216Matrixin
2222222224224Regulator of chromosome condensation (RCC1) repeat
2222222222222Ribosomal protein S13/S18
3333333334435chorismate binding enzyme
333333333443560s Acidic ribosomal protein
4444444446648Prenyltransferase and squalene oxidase repeat
333333223111046Protein kinase C terminal domain
1111111111111Single-strand binding protein family
1111111112213S-adenosylmethionine synthetase, N-terminal domain
1099910101010101514116Bromodomain
1818211819191919192016206Acyl-CoA dehydrogenase, C-terminal domain
1313131314131313134232192Ubiquitin carboxyl-terminal hydrolase
1111111111111Ribosomal protein L36
3333333333333Ribonuclease T2 family
365354544141467HSF-type DNA-binding
2222222222222SRP54-type protein, GTPase domain
2222222226630Urease alpha-subunit, N-terminal domain
1212121212121212121311132Serine carboxypeptidase
1011101010910881725128Phosphatidylinositol 3- and 4-kinase
545545455101163Transketolase, thiamine diphosphate binding domain
3333333334334Glycosyl hydrolases family 11
5555555555555Inositol monophosphatase family
4444444447750Glutaredoxin
2222222226226Isocitrate lyase family
4333333334436Serine hydroxymethyltransferase
12141312111410131368126Iron-containing alcohol dehydrogenase
2222222223324Ribosomal protein L10
2222222222222KOW motif
111111111211Ribosomal protein L34
1111116Ribosomal protein L33
3333333336437RF-1 domain
44444444441454Sodium:solute symporter family
1111111111111Imidazoleglycerol-phosphate dehydratase
1111111111111DNA polymerase family A
1111111112213IMP dehydrogenase / GMP reductase domain
1111111115519Glucose-6-phosphate dehydrogenase, NAD binding domain
666666666132087Protein phosphatase 2C
2222222225427Nucleotidyl transferase
6576656559565Carbonic anhydrase
1111111111212Phosphoribulokinase / Uridine kinase family
1315131313111312121515145Fatty acid desaturase
6666666666767MutS domain V
1111111111111Delta-aminolevulinic acid dehydratase
78777777791083Arginase family
811889791086690MCM P-loop domain
3333333334435Squalene/phytoene synthase
1111111111111Bacterial extracellular solute-binding proteins, family 5 Middle
1010101010101010101923132FHA domain
8489868484868583819494950AMP-binding enzyme
66666666661272G-protein alpha subunit
1015101016111211101563183HMG (high mobility group) box
11E2 (early) protein, N terminal
1924211921212120203745268His Kinase A (phospho-acceptor) domain
2222222227732Armadillo/beta-catenin-like repeat
1815141616171516184726218Tetratricopeptide repeat
4444444345545Ion transport protein
1111111112213DNA gyrase/topoisomerase IV, subunit A
77776777721992BRCA1 C Terminus (BRCT) domain
1210121210121112121714134Glycosyl transferases group 1
22222222213334Glycosyl transferase family 2
2112122029SAM domain (Sterile alpha motif)
1111111115519linker histone H1 and H5 family
1111111111111Ribosomal protein L7/L12 C-terminal domain
111111111111111111912120Pectate lyase
3333333333333ribonuclease
2222222226630Urease, gamma subunit
9999999992117119CoA-ligase
3737363637413637362542400Phosphopantetheine attachment site
4444444444444Formyl transferase
1314141314131413132225168Metallopeptidase family M24
333433333311069Leucine Rich Repeat
1515161515141514149120244alpha/beta hydrolase fold
3333333333333RNA polymerase Rpb2, domain 6
444444444101157PB1 domain
2222222222222Staphylococcal nuclease homologue
1212121212121212121916143Rab-GTPase-TBC domain
1111111111111Tudor domain
1111111113315WH1 domain
45444444410956Zinc finger, ZZ type
2422123223427HRDC domain
1310111211111111111810129CBS domain
2222222222222Ribosomal protein L13
2222222223324Ribosomal protein L4/L1 family
1111111113315Clp protease
3434434448950S1 RNA binding domain
1111111112213HIUase/Transthyretin family
3543556567655AhpC/TSA family
6556555556558tRNA synthetases class I (W and Y)
1221112111215UvrD/REP helicase N-terminal domain
1717181717171617171719189Rhodanese-like domain
2222222227732Universal stress protein family
4547504548494748489563585Acetyltransferase (GNAT) family
111111