PFAM Domains • Circinella umbellata NRRL1351 v1.0
Annotations/GenomesAbsrep1Bacci1Blatri1Chlpad1Cirumb1Fenlin1Gonbut1Kircor1Liccor1Lichy1Mucci2Mycafr1Parpar1Phaart1Phybl2Rhich1Rhimi1_1Rhior3Synrac1Thaele1Zycmex1Zyghet1TotalAnnotation Description
PFAMs
14,49913,47810,52413,39311,85312,50710,67215,78912,79910,4669,58410,06011,39112,3709,21615,2568,62612,21810,79811,91311,73212,692261,836
2131111112147 transmembrane receptor (Secretin family)
4523232531433235313544707 transmembrane sweet-taste receptor of 3 GCPR
595340544446435342454437424448653851464346501,033ATPase family associated with various cellular activities (AAA)
546740534459466556605236465348603444374647471,094ABC transporter
1612816978151059699124711810513209ATP synthase alpha/beta family, nucleotide-binding domain
113218EGF-like domain
33252030232124232219172119222130182421202121495Elongation factor Tu GTP binding domain
707537623737377647513735443835743952334437521,049Helix-loop-helix DNA-binding domain
14425343273341473342482Hsp20/alpha crystallin family
27191424141414191714111420151218101814271417366Hsp70 protein
2019919121011171115141011131222131612111114302KH domain
11Ribulose bisphosphate carboxylase large chain, catalytic domain
1111116SH2 domain
558932493937345845654139353637914855343831391,027SH3 domain
13161213121110141112111414121118111511121114278Actin
1571142013111419105142149113795456568911590Ankyrin repeat
13158129981891112910910139111012913239ADP-ribosylation factor family
31351927273623373127271821283338203523242532617Eukaryotic aspartyl protease
107797769897567712797778168Cyclic nucleotide-binding domain
112Cytochrome b/b6/petB
421322132312121322212244Cytochrome c
211211112311111111221129Double-stranded RNA binding motif
2542316264443213355533481231347EF hand
11211415164Fe-4S binding domain
2211111211111111120Fibronectin type III domain
1411222422122Globin
9203891179812137813719111257810216Glutathione S-transferase, C-terminal domain
463433251231333634443575Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
32552131222622452637272223212851293720232327648Homeodomain
6836664956555656345565119lactate/malate dehydrogenase, NAD binding domain
22Lectin C-type domain
18211520121215251615171417121628161912161216364Myosin head (motor domain)
43853242741334660756441203412354633548504890551,315Cytochrome P450
3233582212992212242163452912772372132342212203862102962132502242535,732Protein kinase domain
17231316161914252019181217171628152114162015391Pyridine nucleotide-disulphide oxidoreductase
698250645654418458596042605654855165517252651,330Ras family
26301825232915293933151518281827172119182321507Response regulator receiver domain
212112112214121RNase H
11513785111989378125106109889191104971659611283104911012,280RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
814958Retroviral aspartyl protease
651134547011587Reverse transcriptase (RNA-dependent DNA polymerase)
4554574111333352635335292Copper/zinc superoxide dismutase (SODC)
21111111121111212111226Iron/manganese superoxide dismutases, alpha-hairpin domain
23312224313016242019161316252427152417192421481Subtilase family
41663041514739564246472634492842224644374740921Sugar (and other) transporter
21181616131215211614151415121324161518141315346Thioredoxin
11Thyroglobulin type-1 repeat
11Trefoil (P-type) domain
651612121542212534222261Trypsin
111331051085111387810998114897187Tubulin/FtsZ family, GTPase domain
11von Willebrand factor type A domain
11WAP-type (Whey Acidic Protein) 'four-disulfide core'
431742737373236564312714029293720314787138373823441,564Zinc finger, C2H2 type
496104655116706474755776041711513568Zinc finger, C3HC4 type (RING finger)
1818272016211411382145917107037231328131610594Zinc knuckle
5758555763656658585765128Protein-tyrosine phosphatase
33493533526045584045452834633349273139305040919short chain dehydrogenase
23462519354528523228292119472339232831233737690Zinc-binding dehydrogenase
99671086119610689511578788173Thiolase, N-terminal domain
332222242234322323222254Beta-ketoacyl synthase, N-terminal domain
25121112441148451111502Fe-2S iron-sulfur cluster binding domain
232122133321222422222550Enolase, C-terminal TIM barrel domain
1225Cytochrome C and Quinol oxidase polypeptide I
22116Cytochrome C oxidase subunit II, periplasmic domain
14131011101081614119891010179991199236Glutamine amidotransferase class-I
22151221121212141313111211111516111811131115301TCP-1/cpn60 chaperonin family
22ATP synthase A chain
89575556675455610564665130Glutamine synthetase, catalytic domain
221211182111111211111134Triosephosphate isomerase
49493343333335523226303440322648263430433439801E1-E2 ATPase
2021141916151117252414141418201314201414168361Core histone H2A/H2B/H3/H4
12112242331112141321240Alpha amylase, catalytic domain
1417101314139151414491111724111312111110267Phorbol esters/diacylglycerol binding domain (C1 domain)
11861166797887765178978611178Bacterial transferase hexapeptide (six repeats)
7666676764467648476667132tRNA synthetases class I (I, L, M and V)
18181518141312291821181419131833201713171418390Cyclin, N-terminal domain
22222231231213221235Carboxylesterase family
5555445544555448465646108DNA polymerase family B
583433344353434845333590ATP synthase subunit C
11111111111111111219Legume lectin domain
343322452242422633332468Peroxidase
1124Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
1133314311152112134Beta-lactamase
212234223322134211213147C-5 cytosine-specific DNA methylase
12115NADH dehydrogenase
42493038333432493539373236343450333737363536818Calcineurin-like phosphoesterase
105599710655334746445567129Cellulase (glycosyl hydrolase family 5)
88576657766666610676667143tRNA synthetases class II (D, K and N)
748056685355508461666353615454905263536453721,379Mitochondrial carrier protein
11recA bacterial DNA recombination protein
24271723201920311921201820212034182220202022476Aminotransferase class I and II
71445665861313676111610155766182Phosphoribosyl transferase domain
14151415121213161315151415121427161713151115323Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
111111122221111212211230Phosphoglycerate kinase
533433353433333235332372Ribosomal protein S4/S9 N-terminal domain
844633375443434646343394Ribosomal protein S12/S23
21221112121212111111229Chaperonin 10 Kd subunit
24361725192213292632232119202241202617182220512C2 domain
6685325839393551467944273541481025360363541301,082PH domain
38483140282825573632282731281949263827362539736bZIP transcription factor
21201421222317222225151315281222121518162218413Aldehyde dehydrogenase family
889243706659538977804640575947775230564651541,332Fungal Zn(2)-Cys(6) binuclear cluster domain
41603140343230543342413134373969374129313240858Cytochrome b5-like Heme/Steroid binding domain
12213321432123111213140Oxidoreductase molybdopterin binding domain
15191413121417211317161214131323131414141215328Oxidoreductase NAD-binding domain
29262130242327262324202224252036222623222327543SNF2 family N-terminal domain
544433363543433635342484Ribosomal protein S7p/S5e
32261825222021262323222222202043222618232025519Ubiquitin-conjugating enzyme
91179876991086788127979810184Isocitrate/isopropylmalate dehydrogenase
664544363454444445453596Ribosomal Proteins L2, RNA binding domain
454344274543444845544596Hsp90 protein
542422331232226424232262Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
222222222222222421122143Dihydrofolate reductase
34433354386133142231021188Cysteine-rich secretory protein family
654433354454534333343586Ribosomal protein S3, C-terminal domain
56553345456354464636361012-oxoacid dehydrogenases acyltransferase (catalytic domain)
375344283343432634353486Catalase
463334253233332223233266Disintegrin
820108425238510595111712212811186UDP-glucoronosyl and UDP-glucosyl transferase
6867576745656669566566133Aminotransferase class-III
575633354443434435443490Ribosomal protein S19
111111311111111211111125DNA gyrase B
47442241022655234353102695Thiamine pyrophosphate enzyme, central domain
6445555444444546346455100Lyase
552433352332333733334375Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
212222132222222323222245Ferritin-like domain
342311244322212423221252Adenylate and Guanylate cyclase catalytic domain
221211121211111212111129ATP synthase delta (OSCP) subunit
111111111111111111111122Orotidine 5'-phosphate decarboxylase / HUMPS family
221111122111111111111227Indole-3-glycerol phosphate synthase
543333364433333635343279Pyruvate kinase, barrel domain
41362640222328303329282429222046283322262430640Kinesin motor domain
46453247313335523635393342323467373832403138855DnaJ domain
24171420141314241414141414141426142614141416362Proteasome subunit
312522242222222112232652Major intrinsic protein
22221112121212212121233ATP synthase
1212610555151188775696857581703'5'-cyclic nucleotide phosphodiesterase
11113111111111322111228Profilin
554533374443435845343695Ribosomal protein L22p/L17e
543433354433333436333277Ribosomal protein L14p/L23e
19312021222520282223221717202335212817211635503Ubiquitin family
777667610886676412686756151Cofilin/tropomyosin-type actin-binding protein
66343326863333384734359614-3-3 protein
553457475543353534344697Alkaline phosphatase
25421521284524343129261218302034181925153327571Aldo/keto reductase family
29391823171918321937232419182061333318211626563Myb-like DNA-binding domain
121410139910209101091091013612710910231Forkhead domain
111115Glycosyl hydrolases family 32 N-terminal domain
114545327114441212344467Ribosomal protein L16p/L10e
853733351444334234333482Ribosomal protein S14p/S29e
109595567776545610567657142FKBP-type peptidyl-prolyl cis-trans isomerase
222211121212212323121238Glutathione peroxidase
545364431
11Dehydrin
921107810111611171589913201114109812258Flavodoxin
211111121111112212111127Calreticulin family
69676968767686595577711153Aminotransferase class-V
231211152232311212121342Ribonucleotide reductase, small chain
615252595257566359514858525447854757555560601,240DEAD/DEAH box helicase
9499779885838896868881808486741287784828288861,926Helicase conserved C-terminal domain
121111111111111211111124EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
653532355444433435343485Ribosomal protein L23
23137611331118112217358Pyridoxal-dependent decarboxylase, C-terminal sheet domain
654522373433325547342587Ribosomal protein L5
564644475443445534444497Pyridoxal-dependent decarboxylase conserved domain
422322253212222211232350Citrate synthase, C-terminal domain
67676666566666612666666139GHMP kinases N terminal domain
1112712910914111111999111689910109226Biotin carboxylase, N-terminal domain
111111111111111212111124Tryptophan synthase alpha chain
10129101099108910991091591099913217Pyridoxal-phosphate dependent enzyme
156'Paired box' domain
21261721181819251618232020171639202318221823458NUDIX domain
510675557367665610665657134pfkB family carbohydrate kinase
566623528977188566109Glycosyl hydrolases family 28
554322362243423535342577Ribosomal protein L3
8636333744444357474435101Ribosomal protein L11, RNA binding domain
121381191071510111110118111610789910226Histidine phosphatase superfamily (branch 1)
211111111111111211111124Thymidylate synthase
1611816958151089699123711810512207ATP synthase alpha/beta chain, C terminal domain
1613715111210192216127101492112913131318292Calponin homology (CH) domain
1214Bacterial dnaA protein
710365646691245569684567139Glutamine amidotransferases class-II
533422243432222635332267Ribosomal protein S15
32122221132122221222138'Cold-shock' DNA-binding domain
673519165711843514584645165166Thaumatin family
11111113111111212111125Fructose-1-6-bisphosphatase, N-terminal domain
452222273344422633242472Ribonucleotide reductase, all-alpha domain
675433263343434436353589Ribosomal protein S2
1414813999141213101099714996999225SRF-type transcription factor (DNA-binding and dimerisation domain)
52653654383830735143363238363568393933433644959GATA zinc finger
123571067915519218107193418248978298Amino acid permease
7978676105566766126766610154Prolyl oligopeptidase family
564455466655555