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PFAM Domains • Phaeosphaeriaceae sp. PMI_808 v1.0
Annotations/GenomesAltbr1Ampqui1CocheC5_3Didex1Lepmu1PhaPMI808Pyrtr1Settu1Stano2TotalAnnotation Description
PFAMs
5,9039,3779,2958,4327,50313,0336,7138,6618,29177,208
1127 transmembrane receptor (rhodopsin family)
117 transmembrane receptor (Secretin family)
324441404172393948396ATPase family associated with various cellular activities (AAA)
373942393851403943368ABC transporter
44444544437ATP synthase alpha/beta family, nucleotide-binding domain
11EGF-like domain
131614141317121415128Elongation factor Tu GTP binding domain
111113141017111412113Helix-loop-helix DNA-binding domain
12333513324Hsp20/alpha crystallin family
698771777775Hsp70 protein
86878798970KH domain
112Ribulose bisphosphate carboxylase large chain, catalytic domain
11111117SH2 domain
211322232414242321185SH3 domain
910101011107101087Actin
35688593267585368466Ankyrin repeat
41882123433PAN domain
77787777764ADP-ribosylation factor family
8242211618121212125Eukaryotic aspartyl protease
24444444434Cyclic nucleotide-binding domain
224Cytochrome b(C-terminal)/b6/petD
213Cytochrome b/b6/petB
1111111119Cytochrome c
21111122112Double-stranded RNA binding motif
1821817163191717127EF hand
2112112104Fe-4S binding domain
21421232320Fibronectin type III domain
1111111119Globin
10129121214681194Glutathione S-transferase, C-terminal domain
111111118Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
558766981064Homeodomain
43444334433lactate/malate dehydrogenase, NAD binding domain
64546554544Myosin head (motor domain)
6354156846319687133117953Cytochrome P450
841471151111142531041061151,149Protein kinase domain
91317151417121515127Pyridine nucleotide-disulphide oxidoreductase
222526232427222523217Ras family
212427262220242522211Response regulator receiver domain
23103445637RNase H
495558585354585855498RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
347Reverse transcriptase (RNA-dependent DNA polymerase)
14232422323Copper/zinc superoxide dismutase (SODC)
22222222117Iron/manganese superoxide dismutases, alpha-hairpin domain
71212610209121098Subtilase family
745870686282886481647Sugar (and other) transporter
10121312101391213104Thioredoxin
52243123426Trypsin
44444344435Tubulin/FtsZ family, GTPase domain
11523334325von Willebrand factor type A domain
561768595127706147456Zinc finger, C2H2 type
3575457578435147359Zinc finger, C3HC4 type (RING finger)
162124842312586Zinc knuckle
22222222218Protein-tyrosine phosphatase
988613210279124113131121986short chain dehydrogenase
523769594561606861512Zinc-binding dehydrogenase
96756676658Thiolase, N-terminal domain
101128111641233122193Beta-ketoacyl synthase, N-terminal domain
426654666452Fe-2S iron-sulfur cluster binding domain
112Papain family cysteine protease
1111111119Enolase, C-terminal TIM barrel domain
112Cytochrome C and Quinol oxidase polypeptide I
11Cytochrome C oxidase subunit II, periplasmic domain
798981269876Glutamine amidotransferase class-I
1010101010101010989TCP-1/cpn60 chaperonin family
11ATP synthase A chain
33333333327Glutamine synthetase, catalytic domain
22222222218Triosephosphate isomerase
131919151624161716155E1-E2 ATPase
5811987319694Core histone H2A/H2B/H3/H4
112Copper binding proteins, plastocyanin/azurin family
65666666653Alpha amylase, catalytic domain
22122221216Phorbol esters/diacylglycerol binding domain (C1 domain)
668781389873Bacterial transferase hexapeptide (six repeats)
75333584543tRNA synthetases class I (I, L, M and V)
589771189670Cyclin, N-terminal domain
241429282230222331223Carboxylesterase family
44444444436DNA polymerase family B
34443444434ATP synthase subunit C
11Legume lectin domain
73897577659Peroxidase
85711518751177Beta-lactamase
23233333224C-5 cytosine-specific DNA methylase
213NADH dehydrogenase
232328272426262724228Calcineurin-like phosphoesterase
1013913716671394Cellulase (glycosyl hydrolase family 5)
77777977866tRNA synthetases class II (D, K and N)
363941403842404041357Mitochondrial carrier protein
112recA bacterial DNA recombination protein
7151715152391614131Aminotransferase class I and II
648997910971Phosphoribosyl transferase domain
111113121211121210104Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1111111119Phosphoglycerate kinase
22222122217Ribosomal protein S4/S9 N-terminal domain
22221221216Ribosomal protein S12/S23
2111211110Bacterial regulatory helix-turn-helix proteins, AraC family
1111111119Chaperonin 10 Kd subunit
1110121210811111095C2 domain
161222182011181920156PH domain
61191181488681bZIP transcription factor
201427191724211919180Aldehyde dehydrogenase family
7911819216511620392160811,206Fungal Zn(2)-Cys(6) binuclear cluster domain
182224262122222623204Cytochrome b5-like Heme/Steroid binding domain
33443533533Oxidoreductase molybdopterin binding domain
91118171114101614120Oxidoreductase NAD-binding domain
212525252430262426226SNF2 family N-terminal domain
22222222218Ribosomal protein S7p/S5e
212322232126212523205Ubiquitin-conjugating enzyme
76776776760Isocitrate/isopropylmalate dehydrogenase
22222222218Ribosomal Proteins L2, RNA binding domain
1111111119Hsp90 protein
12222222217Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1111111119Dihydrofolate reductase
921068865660Chitin recognition protein
33153522428Cysteine-rich secretory protein family
211111119Ribosomal protein S3, C-terminal domain
34453866544Cupin
12222222217Annexin
11121111211Eukaryotic-type carbonic anhydrase
1111111119Chalcone and stilbene synthases, N-terminal domain
234323333262-oxoacid dehydrogenases acyltransferase (catalytic domain)
45474454441Catalase
1111111119Disintegrin
21418UDP-glucoronosyl and UDP-glucosyl transferase
6610781188973Aminotransferase class-III
12221222115Ribosomal protein S19
1111111119DNA gyrase B
44654734542Thiamine pyrophosphate enzyme, central domain
44434444435Lyase
12222222217Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
12111133215Sodium:neurotransmitter symporter family
111111118Adenylate and Guanylate cyclase catalytic domain
111111118ATP synthase delta (OSCP) subunit
1111111119Orotidine 5'-phosphate decarboxylase / HUMPS family
1111111119Indole-3-glycerol phosphate synthase
11Neurohypophysial hormones, N-terminal Domain
121228Aromatic amino acid lyase
1111111119Pyruvate kinase, barrel domain
1012111011111091397Kinesin motor domain
303229292830323128269DnaJ domain
121414141414141414124Proteasome subunit
76787878765Major intrinsic protein
1111111119ATP synthase
22343333225Glycosyl hydrolase family 1
111111173'5'-cyclic nucleotide phosphodiesterase
11211111110Profilin
2211211111Ribosomal protein L22p/L17e
22222222218Ribosomal protein L14p/L23e
1010111210811111093Ubiquitin family
25554525437Cofilin/tropomyosin-type actin-binding protein
3322242222214-3-3 protein
52656246642Alkaline phosphatase
107888878872Zinc carboxypeptidase
222525252125212724215Aldo/keto reductase family
1171514128141612109Myb-like DNA-binding domain
24444544435Forkhead domain
21322633527Glycosyl hydrolases family 32 N-terminal domain
12111211111Ribosomal protein L16p/L10e
13333313323Ribosomal protein S14p/S29e
55555755547FKBP-type peptidyl-prolyl cis-trans isomerase
1111111119Glutathione peroxidase
11111117
65985678660Flavodoxin
1124Protamine P1
111111118Calreticulin family
8812117206101092Common central domain of tyrosinase
398771039662Aminotransferase class-V
1111111119Ribonucleotide reductase, small chain
444539464046524238392DEAD/DEAH box helicase
656977777482777376670Helicase conserved C-terminal domain
1111111119EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
22222222218Ribosomal protein L23
111111118Pyridoxal-dependent decarboxylase, C-terminal sheet domain
21222122216Ribosomal protein L5
66665866756Pyridoxal-dependent decarboxylase conserved domain
23322322221Citrate synthase, C-terminal domain
55555555444GHMP kinases N terminal domain
76776667658Biotin carboxylase, N-terminal domain
11111211110Tryptophan synthase alpha chain
81114121211101112101Pyridoxal-phosphate dependent enzyme
111516161316141513129NUDIX domain
55565655648pfkB family carbohydrate kinase
635136366452Glycosyl hydrolases family 28
112116Luciferase-like monooxygenase
32222222219Ribosomal protein L3
12222212216Ribosomal protein L11, RNA binding domain
101415131215101214115Histidine phosphatase superfamily (branch 1)
1111111119Thymidylate synthase
11136Lipoxygenase
44444544336ATP synthase alpha/beta chain, C terminal domain
55535545340Calponin homology (CH) domain
62755355341Glutamine amidotransferases class-II
12322222218Ribosomal protein S15
1111111119Thaumatin family
21222122115Fructose-1-6-bisphosphatase, N-terminal domain
1111111119Ribonucleotide reductase, all-alpha domain
22322222219Ribosomal protein S2
21222222217SRF-type transcription factor (DNA-binding and dimerisation domain)
56775755552GATA zinc finger
221239332914323233246Amino acid permease
26855926750Prolyl oligopeptidase family
23323323223Ribosomal protein L30p/L7e
6101214101110121297Histidine phosphatase superfamily (branch 2)
1111111119Respiratory-chain NADH dehydrogenase, 30 Kd subunit
44444444436Aconitase family (aconitate hydratase)
54533645843Glycosyl hydrolase family 10
12252123321Glycosyl hydrolases family 17
22222212217Ribosomal protein S5, N-terminal domain
1111111119Nucleoside diphosphate kinase
1111217Tetraspanin family
22111221214Ribosomal protein S10p/S20e
35443746541Arrestin (or S-antigen), N-terminal domain
11112111110Phosphoglucose isomerase
1111111119Carbohydrate phosphorylase
1111111119SecY translocase
1111111119Respiratory-chain NADH dehydrogenase, 49 Kd subunit
22222222218Ribosomal protein L6
54843453339Polyprenyl synthetase
54454654542Hexokinase
41174722911580Dynamin family
1111111119Transcription factor TFIID (or TATA-binding protein, TBP)
44585655648Rieske [2Fe-2S] domain
112Phytochrome region
74617Proton-conducting membrane transporter
681187799671Biotin-requiring enzyme
1111111119Phosphofructokinase
22222122116Ribosomal protein S17
11111412113Hydroxymethylglutaryl-coenzyme A reductase
33333433328FGGY family of carbohydrate kinases, N-terminal domain
11111117Sodium:dicarboxylate symporter family
81012119129101192Enoyl-CoA hydratase/isomerase
22222222218Ribosomal protein S9/S16
22222222218Transcription factor TFIIB repeat
57677666555Cytidine and deoxycytidylate deaminase zinc-binding region
21111111110Molybdopterin oxidoreductase
465567210651Chromo (CHRromatin Organisation MOdifier) domain
23333333326Phosphatidylinositol-specific phospholipase C, Y domain
34333443330Phosphatidylinositol-specific phospholipase C, X domain
97978117101078D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
12212222216Malic enzyme, N-terminal domain
112222122156-phosphogluconate dehydrogenase, C-terminal domain
5712868981073Multicopper oxidase
98111210910111191WW domain
12111111110Ribosomal RNA adenine dimethylase
1222222114Yeast PIR protein repeat
9799127106101116103117100966WD domain, G-beta repeat
63454644440Heavy-metal-associated domain
43433643333Adenylate kinase
33222332222Phosphoglucomutase/phosphomannomutase, C-terminal domain
22222211216Ribosomal protein S8
12111211111Ribosomal protein S11
34444544436LIM domain
1113Matrixin
12121222215Regulator of chromosome condensation (RCC1) repeat
32222222219Ribosomal protein S13/S18
213NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
22222322219chorismate binding enzyme
4444333443360s Acidic ribosomal protein
44444444436Prenyltransferase and squalene oxidase repeat
54656455747Protein kinase C terminal domain
1111111119Single-strand binding protein family
1111111119S-adenosylmethionine synthetase, N-terminal domain
68778878867Bromodomain
141015151213121414119Acyl-CoA dehydrogenase, C-terminal domain
151614151517171417140Ubiquitin carboxyl-terminal hydrolase
111111118Ribosomal protein L36
22332222220Ribonuclease T2 family
23433333226HSF-type DNA-binding
22222222218SRP54-type protein, GTPase domain
1111111119Urease alpha-subunit, N-terminal domain
9101398910111190Serine carboxypeptidase
78889878871Phosphatidylinositol 3- and 4-kinase
22232222219Transketolase, thiamine diphosphate binding domain
42532835739Glycosyl hydrolases family 11
54554545542Inositol monophosphatase family
14444424431Glutaredoxin
23333223324Isocitrate lyase family
22222222218Serine hydroxymethyltransferase
33643644437Iron-containing alcohol dehydrogenase
12222222217Ribosomal protein L10
54333263433KOW motif
1111116Ribosomal protein L34
1113Negative factor, (F-Protein) or Nef
112Ribosomal protein L33
13221322218RF-1 domain
12343133222Sodium:solute symporter family
1111111119Imidazoleglycerol-phosphate dehydratase
1111111119DNA polymerase family A
1111111119IMP dehydrogenase / GMP reductase domain
1111111119Glucose-6-phosphate dehydrogenase, NAD binding domain
67877777763Protein phosphatase 2C
23333333225Nucleotidyl transferase
13212332320Carbonic anhydrase
23111311114Phosphoribulokinase / Uridine kinase family
68777867763Fatty acid desaturase
66666666654MutS domain V
1111111119Delta-aminolevulinic acid dehydratase
44544554540Arginase family
66766666655MCM P-loop domain
23222322220Squalene/phytoene synthase
11Bacterial extracellular solute-binding proteins, family 5 Middle
78899998875FHA domain
11NADH-ubiquinone/plastoquinone oxidoreductase chain 6
343757384167505448426AMP-binding enzyme
34454644438G-protein alpha subunit
77789897668HMG (high mobility group) box
1113NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
123Cytochrome c oxidase subunit III
162122221919232117180His Kinase A (phospho-acceptor) domain
13333333325Armadillo/beta-catenin-like repeat
231231252518282723212Tetratricopeptide repeat
23241132220Ion transport protein
1111111119DNA gyrase/topoisomerase IV, subunit A
1010111291011111296BRCA1 C Terminus (BRCT) domain
36656876653Glycosyl transferases group 1
42535283335Glycosyl transferase family 2
64333452434SAM domain (Sterile alpha motif)
1111111119linker histone H1 and H5 family
11211111110Ribosomal protein L7/L12 C-terminal domain
755115424346Pectate lyase
12251511119ribonuclease
111111118Urease, gamma subunit
34544444436CoA-ligase
82029111651253123214Phosphopantetheine attachment site
33333333327Formyl transferase
599981079975Metallopeptidase family M24
1321813131151513103Leucine Rich Repeat
22642383312213842254alpha/beta hydrolase fold
33333333327RNA polymerase Rpb2, domain 6
34343434432PB1 domain
22222222218Staphylococcal nuclease homologue
12121212111210129102Rab-GTPase-TBC domain
1111111119Tudor domain
11111112110WH1 domain
35344533636Zinc finger, ZZ type
33332323224HRDC domain
87899798974CBS domain
22222222218Ribosomal protein L13
22222222218Ribosomal protein L4/L1 family
1111111119Clp protease
24433533330S1 RNA binding domain
11112118HIUase/Transthyretin family
64685474650AhpC/TSA family
44444444436tRNA synthetases class I (W and Y)
12112212113UvrD/REP helicase N-terminal domain
494541334450Rhodanese-like domain
12222222116Universal stress protein family
212445352837323536293Acetyltransferase (GNAT) family
1111111119SecE/Sec61-gamma subunits of protein translocation complex
1111111119C-terminal regulatory domain of Threonine dehydratase
22322222219AIR synthase related protein, N-terminal domain
87988798872tRNA synthetase class II core domain (G, H, P, S and T)
22222222218SpoU rRNA Methylase family
1113Phage integrase family
22222222218Tetrapyrrole (Corrin/Porphyrin) Methylases
1111111119Glycosyl transferase family, a/b domain
12112123114PDZ domain
53863757650Class II Aldolase and Adducin N-terminal domain
44444444436Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
55555455443Fes/CIP4, and EFC/F-BAR homology domain
64657265546IQ calmodulin-binding motif
22222222218Phosphoinositide 3-kinase family, accessory domain (PIK domain)
52665255743Phospholipase D Active site motif
15111511117Regulator of G protein signaling domain
23333333326GTPase-activator protein for Ras-like GTPase
34444444435RasGEF domain
24444434433RasGEF N-terminal motif
78978788870RhoGAP domain
66666666654RhoGEF domain
22222332422SPRY domain
33333333327RNA polymerase Rpb1, domain 2
1111111119Guanylate kinase
33344433229Gelsolin repeat
858996109771UBA/TS-N domain
171317141812161615138PHD-finger
11111117GGL domain
45556555545HECT-domain (ubiquitin-transferase)
21232122217Helix-hairpin-helix motif
1111111119MSP (Major sperm protein) domain
331057446850Ribonuclease III domain
15222512222Region in Clathrin and VPS
22222222218RanBP1 domain
2221222215PPIC-type PPIASE domain
1111111119Zn-finger in Ran binding protein and others
18917151711202013140Zinc finger C-x8-C-x5-C-x3-H type (and similar)
13232212218Poly(ADP-ribose) polymerase catalytic domain
221122111Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
501169514725726151437F-box domain
1111111119Elongation factor 1 gamma, conserved domain
23333633127Calpain family cysteine protease
2212222114Copper fist DNA binding domain
55555545544CRAL/TRIO domain
2261910143262212143BTB/POZ domain
11114Ricin-type beta-trefoil lectin domain
111121119Inhibitor of Apoptosis domain
33344443432Voltage gated chloride channel
12323622223Caspase domain
1139141141010880GDSL-like Lipase/Acylhydrolase
1111111119Poly-adenylate binding protein, unique domain
1111116POLO box duplicated region
11NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
191820162024181819172ABC transporter transmembrane region
224Integrase core domain
46985758557FAD binding domain
5711572315121095Condensation domain
1111111119S-adenosyl-L-homocysteine hydrolase, NAD binding domain
111111118HAMP domain
22222222218ribosomal L5P family C-terminus
55555755446Insulinase (Peptidase family M16)
333