PFAM Domains • Trichoderma atroviride v2.0
Annotations/GenomesTriat2Trire2TriviGv29_8_2TotalAnnotation Description
PFAMs
9,1406,5079,84425,491
117 transmembrane receptor (Secretin family)
514449144ATPase family associated with various cellular activities (AAA)
474662155ABC transporter
44412ATP synthase alpha/beta family, nucleotide-binding domain
13141441Elongation factor Tu GTP binding domain
1091029Helix-loop-helix DNA-binding domain
53513Hsp20/alpha crystallin family
87823Hsp70 protein
98926KH domain
1113SH2 domain
21242267SH3 domain
107926Actin
13563171369Ankyrin repeat
2248PAN domain
77721ADP-ribosylation factor family
20162157Eukaryotic aspartyl protease
44412Cyclic nucleotide-binding domain
1113Cytochrome c
1214Double-stranded RNA binding motif
18201856EF hand
11134Fe-4S binding domain
3126Fibronectin type III domain
2226Globin
23102760Glutathione S-transferase, C-terminal domain
1124Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
1051126Homeodomain
3238lactate/malate dehydrogenase, NAD binding domain
54514Myosin head (motor domain)
6669118253Cytochrome P450
112106126344Protein kinase domain
22142561Pyridine nucleotide-disulphide oxidoreductase
24232572Ras family
15131442Response regulator receiver domain
32510RNase H
605957176RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
11Reverse transcriptase (RNA-dependent DNA polymerase)
2226Copper/zinc superoxide dismutase (SODC)
2237Iron/manganese superoxide dismutases, alpha-hairpin domain
36152980Subtilase family
747686236Sugar (and other) transporter
12111437Thioredoxin
2125Trypsin
56516Tubulin/FtsZ family, GTPase domain
52411von Willebrand factor type A domain
626763192Zinc finger, C2H2 type
383238108Zinc finger, C3HC4 type (RING finger)
95923Zinc knuckle
3227Protein-tyrosine phosphatase
170118181469short chain dehydrogenase
885392233Zinc-binding dehydrogenase
56516Thiolase, N-terminal domain
22172665Beta-ketoacyl synthase, N-terminal domain
555152Fe-2S iron-sulfur cluster binding domain
11Papain family cysteine protease
2125Enolase, C-terminal TIM barrel domain
22Cytochrome C and Quinol oxidase polypeptide I
871025Glutamine amidotransferase class-I
10101030TCP-1/cpn60 chaperonin family
2248Glutamine synthetase, catalytic domain
2226Triosephosphate isomerase
16161951E1-E2 ATPase
77923Core histone H2A/H2B/H3/H4
44513Alpha amylase, catalytic domain
2226Phorbol esters/diacylglycerol binding domain (C1 domain)
1281232Bacterial transferase hexapeptide (six repeats)
46414tRNA synthetases class I (I, L, M and V)
87924Cyclin, N-terminal domain
19122859Carboxylesterase family
44412DNA polymerase family B
64414ATP synthase subunit C
66719Peroxidase
1981845Beta-lactamase
2125C-5 cytosine-specific DNA methylase
30273289Calcineurin-like phosphoesterase
1041024Cellulase (glycosyl hydrolase family 5)
78823tRNA synthetases class II (D, K and N)
383538111Mitochondrial carrier protein
20162965Aminotransferase class I and II
108826Phosphoribosyl transferase domain
10101030Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1113Phosphoglycerate kinase
2226Ribosomal protein S4/S9 N-terminal domain
2237Ribosomal protein S12/S23
4127Bacterial regulatory helix-turn-helix proteins, AraC family
1113Chaperonin 10 Kd subunit
12141339C2 domain
17191753PH domain
12111437bZIP transcription factor
25203176Aldehyde dehydrogenase family
276192310778Fungal Zn(2)-Cys(6) binuclear cluster domain
24212570Cytochrome b5-like Heme/Steroid binding domain
34411Oxidoreductase molybdopterin binding domain
18142355Oxidoreductase NAD-binding domain
27252779SNF2 family N-terminal domain
2226Ribosomal protein S7p/S5e
20202060Ubiquitin-conjugating enzyme
77822Isocitrate/isopropylmalate dehydrogenase
2226Ribosomal Proteins L2, RNA binding domain
1113Hsp90 protein
2226Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1113Dihydrofolate reductase
52512Chitin recognition protein
3339Cysteine-rich secretory protein family
1113Ribosomal protein S3, C-terminal domain
53412Cupin
3227Annexin
1113Eukaryotic-type carbonic anhydrase
434112-oxoacid dehydrogenases acyltransferase (catalytic domain)
77721Catalase
1113Disintegrin
123UDP-glucoronosyl and UDP-glucosyl transferase
881026Aminotransferase class-III
2226Ribosomal protein S19
1113DNA gyrase B
84921Thiamine pyrophosphate enzyme, central domain
3339Lyase
2226Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
1113Adenylate and Guanylate cyclase catalytic domain
1113ATP synthase delta (OSCP) subunit
1113Orotidine 5'-phosphate decarboxylase / HUMPS family
1113Indole-3-glycerol phosphate synthase
112Aromatic amino acid lyase
1113Pyruvate kinase, barrel domain
10111031Kinesin motor domain
26262577DnaJ domain
14141442Proteasome subunit
77822Major intrinsic protein
1113ATP synthase
4228Glycosyl hydrolase family 1
11133'5'-cyclic nucleotide phosphodiesterase
1113Profilin
1113Ribosomal protein L22p/L17e
2226Ribosomal protein L14p/L23e
1281232Ubiquitin family
53513Cofilin/tropomyosin-type actin-binding protein
223714-3-3 protein
2338Alkaline phosphatase
44412Zinc carboxypeptidase
362745108Aldo/keto reductase family
13141542Myb-like DNA-binding domain
44412Forkhead domain
112Glycosyl hydrolases family 32 N-terminal domain
1113Ribosomal protein L16p/L10e
2125Ribosomal protein S14p/S29e
3339FKBP-type peptidyl-prolyl cis-trans isomerase
1113Glutathione peroxidase
2226
77822Flavodoxin
1113Calreticulin family
3249Common central domain of tyrosinase
83819Aminotransferase class-V
1113Ribonucleotide reductase, small chain
374936122DEAD/DEAH box helicase
747573222Helicase conserved C-terminal domain
1113EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
2226Ribosomal protein L23
1113Pyridoxal-dependent decarboxylase, C-terminal sheet domain
2226Ribosomal protein L5
86721Pyridoxal-dependent decarboxylase conserved domain
2226Citrate synthase, C-terminal domain
55515GHMP kinases N terminal domain
65718Biotin carboxylase, N-terminal domain
1113Tryptophan synthase alpha chain
13121540Pyridoxal-phosphate dependent enzyme
18152255NUDIX domain
44513pfkB family carbohydrate kinase
64616Glycosyl hydrolases family 28
2226Ribosomal protein L3
2226Ribosomal protein L11, RNA binding domain
1161229Histidine phosphatase superfamily (branch 1)
1113Thymidylate synthase
11Lipoxygenase
44412ATP synthase alpha/beta chain, C terminal domain
55515Calponin homology (CH) domain
54615Glutamine amidotransferases class-II
2226Ribosomal protein S15
1113Thaumatin family
2226Fructose-1-6-bisphosphatase, N-terminal domain
1113Ribonucleotide reductase, all-alpha domain
2226Ribosomal protein S2
2226SRF-type transcription factor (DNA-binding and dimerisation domain)
86822GATA zinc finger
353336104Amino acid permease
3159Prolyl oligopeptidase family
2226Ribosomal protein L30p/L7e
84820Histidine phosphatase superfamily (branch 2)
1113Respiratory-chain NADH dehydrogenase, 30 Kd subunit
64616Aconitase family (aconitate hydratase)
1124Glycosyl hydrolase family 10
3137Glycosyl hydrolases family 17
2226Ribosomal protein S5, N-terminal domain
1113Nucleoside diphosphate kinase
1113Ribosomal protein S10p/S20e
2327Arrestin (or S-antigen), N-terminal domain
1113Phosphoglucose isomerase
1113Carbohydrate phosphorylase
1113SecY translocase
1113Respiratory-chain NADH dehydrogenase, 49 Kd subunit
2226Ribosomal protein L6
3339Polyprenyl synthetase
44513Hexokinase
1091130Dynamin family
1113Transcription factor TFIID (or TATA-binding protein, TBP)
44412Rieske [2Fe-2S] domain
11Phytochrome region
861024Biotin-requiring enzyme
1113Phosphofructokinase
2226Ribosomal protein S17
1113Hydroxymethylglutaryl-coenzyme A reductase
3339FGGY family of carbohydrate kinases, N-terminal domain
15121845Enoyl-CoA hydratase/isomerase
2226Ribosomal protein S9/S16
2226Transcription factor TFIIB repeat
76619Cytidine and deoxycytidylate deaminase zinc-binding region
1113Molybdopterin oxidoreductase
71917Chromo (CHRromatin Organisation MOdifier) domain
44412Phosphatidylinositol-specific phospholipase C, Y domain
56617Phosphatidylinositol-specific phospholipase C, X domain
1051227D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
2226Malic enzyme, N-terminal domain
11PEP-utilising enzyme, mobile domain
21146-phosphogluconate dehydrogenase, C-terminal domain
108927Multicopper oxidase
11101031WW domain
1113Ribosomal RNA adenine dimethylase
112Yeast PIR protein repeat
138123148409WD domain, G-beta repeat
55515Heavy-metal-associated domain
34310Adenylate kinase
2226Phosphoglucomutase/phosphomannomutase, C-terminal domain
1225Ribosomal protein S8
1113Ribosomal protein S11
34411LIM domain
257Matrixin
2114Regulator of chromosome condensation (RCC1) repeat
2226Ribosomal protein S13/S18
11NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
2226chorismate binding enzyme
333960s Acidic ribosomal protein
44412Prenyltransferase and squalene oxidase repeat
75820Protein kinase C terminal domain
1113Single-strand binding protein family
1113S-adenosylmethionine synthetase, N-terminal domain
77721Bromodomain
1081028Acyl-CoA dehydrogenase, C-terminal domain
13151442Ubiquitin carboxyl-terminal hydrolase
1113Ribosomal protein L36
43512Ribonuclease T2 family
33410HSF-type DNA-binding
2226SRP54-type protein, GTPase domain
1113Urease alpha-subunit, N-terminal domain
75719Serine carboxypeptidase
88824Phosphatidylinositol 3- and 4-kinase
2226Transketolase, thiamine diphosphate binding domain
43411Glycosyl hydrolases family 11
44513Inositol monophosphatase family
43411Glutaredoxin
42410Isocitrate lyase family
2226Serine hydroxymethyltransferase
2237Iron-containing alcohol dehydrogenase
2226Ribosomal protein L10
36312KOW motif
2237RF-1 domain
45514Sodium:solute symporter family
1113Imidazoleglycerol-phosphate dehydratase
1113DNA polymerase family A
1113IMP dehydrogenase / GMP reductase domain
1113Glucose-6-phosphate dehydrogenase, NAD binding domain
66719Protein phosphatase 2C
3339Nucleotidyl transferase
941023Carbonic anhydrase
1214Phosphoribulokinase / Uridine kinase family
76619Fatty acid desaturase
66618MutS domain V
1113Delta-aminolevulinic acid dehydratase
33410Arginase family
66618MCM P-loop domain
1113Squalene/phytoene synthase
1081230FHA domain
493764150AMP-binding enzyme
3339G-protein alpha subunit
671023HMG (high mobility group) box
11NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
12101133His Kinase A (phospho-acceptor) domain
3339Armadillo/beta-catenin-like repeat
35244099Tetratricopeptide repeat
45413Ion transport protein
1113DNA gyrase/topoisomerase IV, subunit A
11111133BRCA1 C Terminus (BRCT) domain
66618Glycosyl transferases group 1
43310Glycosyl transferase family 2
1315SAM domain (Sterile alpha motif)
1113linker histone H1 and H5 family
1113Ribosomal protein L7/L12 C-terminal domain
11Pectate lyase
2125ribonuclease
1113Urease, gamma subunit
55515CoA-ligase
29194391Phosphopantetheine attachment site
3339Formyl transferase
1181029Metallopeptidase family M24
14161343Leucine Rich Repeat
692277168alpha/beta hydrolase fold
3339RNA polymerase Rpb2, domain 6
44412PB1 domain
2226Staphylococcal nuclease homologue
10101030Rab-GTPase-TBC domain
1113Tudor domain
1113WH1 domain
45312Zinc finger, ZZ type
1113HRDC domain
99927CBS domain
2226Ribosomal protein L13
2226Ribosomal protein L4/L1 family
1113Clp protease
55515S1 RNA binding domain
1113HIUase/Transthyretin family
43411AhpC/TSA family
44412tRNA synthetases class I (W and Y)
112UvrD/REP helicase N-terminal domain
44816Rhodanese-like domain
2226Universal stress protein family
524065157Acetyltransferase (GNAT) family
1113SecE/Sec61-gamma subunits of protein translocation complex
1113C-terminal regulatory domain of Threonine dehydratase
2226AIR synthase related protein, N-terminal domain
108927tRNA synthetase class II core domain (G, H, P, S and T)
1113SpoU rRNA Methylase family
2226Tetrapyrrole (Corrin/Porphyrin) Methylases
1113Glycosyl transferase family, a/b domain
1113PDZ domain
43310Class II Aldolase and Adducin N-terminal domain
44412Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
33511Fes/CIP4, and EFC/F-BAR homology domain
65516IQ calmodulin-binding motif
2226Phosphoinositide 3-kinase family, accessory domain (PIK domain)
65516Phospholipase D Active site motif
1113Regulator of G protein signaling domain
44412GTPase-activator protein for Ras-like GTPase
44412RasGEF domain
42410RasGEF N-terminal motif
88824RhoGAP domain
65617RhoGEF domain
53311SPRY domain
3339RNA polymerase Rpb1, domain 2
2338Guanylate kinase
44412Gelsolin repeat
107926UBA/TS-N domain
18151952PHD-finger
1113GGL domain
66618HECT-domain (ubiquitin-transferase)
213Helix-hairpin-helix motif
1113MSP (Major sperm protein) domain
54514Ribonuclease III domain
3238Region in Clathrin and VPS
3339RanBP1 domain
2226PPIC-type PPIASE domain
2237Zn-finger in Ran binding protein and others
16151647Zinc finger C-x8-C-x5-C-x3-H type (and similar)
2136Poly(ADP-ribose) polymerase catalytic domain
112Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
635161175F-box domain
1113Elongation factor 1 gamma, conserved domain
33410Calpain family cysteine protease
2226Copper fist DNA binding domain
55616CRAL/TRIO domain
651021BTB/POZ domain
64414Ricin-type beta-trefoil lectin domain
1113Inhibitor of Apoptosis domain
3339Voltage gated chloride channel
3249Caspase domain
75820GDSL-like Lipase/Acylhydrolase
1113Poly-adenylate binding protein, unique domain
24253685ABC transporter transmembrane region
11Integrase core domain
66719FAD binding domain
14102953Condensation domain
1113S-adenosyl-L-homocysteine hydrolase, NAD binding domain
1113HAMP domain
2226ribosomal L5P family C-terminus
55515Insulinase (Peptidase family M16)
33410Dehydrogenase E1 component
1113Lumazine binding domain
65617Elongation factor G C-terminus
44513HMGL-like
44412DnaJ central domain
3115Starch binding domain
2226Ribosomal protein L1p/L10e family
891128Cation transporting ATPase, C-terminus
10101333Cation transporter/ATPase, N-terminus
1124dUTPase
64616Aconitase C-terminal domain
43411Amino acid kinase family
1113N-(5'phosphoribosyl)anthranilate (PRA) isomerase
22172665Acyl transferase domain
1113Urease beta subunit
76720Dihydrodipicolinate synthetase family
353140106haloacid dehalogenase-like hydrolase
971026Glycosyl hydrolases family 2
27193076Glycosyl hydrolases family 18
1113Proliferating cell nuclear antigen, N-terminal domain
11Translation initiation factor IF-3, C-terminal domain
11Acylphosphatase
2125Adenylosuccinate synthetase
1113Asparaginase, N-terminal
2226Peptidase S24-like
3238Inorganic pyrophosphatase
11131236Glycosyl hydrolases family 16
3227Glycosyl hydrolases family 15
1781641NADH:flavin oxidoreductase / NADH oxidase family
425113-hydroxyacyl-CoA dehydrogenase, C-terminal domain
3339Glycosyl hydrolase family 20, catalytic domain
55515HhH-GPD superfamily base excision DNA repair protein
1113AIR carboxylase
12121842GMC oxidoreductase
2237Asparagine synthase
21142459Fungal cellulose binding domain
55515Septin
1124EF-1 guanine nucleotide exchange domain
1113Homoserine dehydrogenase
213Flavin-binding monooxygenase-like
3339tRNA synthetases class I (E and Q), catalytic domain
1113tRNA synthetases class I (R)
43411XPG N-terminal domain
15102045Metallo-beta-lactamase superfamily
3115F5/8 type C domain
3238Choline/Carnitine o-acyltransferase
1113Putative esterase
1113Ferrochelatase
2226Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
2215Arginosuccinate synthase
1113Electron transfer flavoprotein FAD-binding domain
3339RNB domain
44614Dioxygenase
3238CNH domain
2114Diacylglycerol kinase catalytic domain
64717Dual specificity phosphatase, catalytic domain
44
2327P21-Rho-binding domain
12121236PX domain
3339Ras association (RalGDS/AF-6) domain
54514UBX domain
44412VHS domain
1113Phosphoinositide 3-kinase C2
2226DAHP synthetase I family
14121844Carbon-nitrogen hydrolase
1124N-acetyltransferase
1113Prephenate dehydratase
44412Syntaxin
55515Pumilio-family RNA binding repeat
65617Histone-like transcription factor (CBF/NF-Y) and archaeal histone
1113Pterin binding enzyme
2226ER lumen protein retaining receptor
2226Glycoprotease family
1113Histidinol dehydrogenase
44412impB/mucB/samB family
11Ice nucleation protein repeat
1113
1113Ribosomal L15
1113Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
112Ribosomal L28 family
1113Ribosomal L29 protein
1113Ribosomal L39 protein
1113Ribosomal S17
1113Ribulose-phosphate 3 epimerase family
1113Translationally controlled tumour protein
2226Glycosyl hydrolase family 7
1113RNA pseudouridylate synthase
44412Histone deacetylase domain
33410POT family
1113PWWP domain
1391234SET domain
1371232Isochorismatase family
3238Permease family
1113Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
44412XPG I-region
1113Acetokinase family
3328DNA photolyase
11Cation-independent mannose-6-phosphate receptor repeat
213Nitroreductase family
95923Sulfatase
11136,7-dimethyl-8-ribityllumazine synthase
1113Ribosomal protein S16
2226Acyl CoA binding protein
43411Cullin family
62513FAD binding domain
431219O-methyltransferase domain
4149EamA-like transporter family
1113
88824ThiF family
1113Ribosomal family S4e
621119Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
2226Ammonium Transporter Family
65516Sulfate permease family
1113MATH domain
33410Dehydratase family
42410Transaldolase/Fructose-6-phosphate aldolase
3238Mechanosensitive ion channel
1214GTP cyclohydrolase II
11133,4-dihydroxy-2-butanone 4-phosphate synthase
43411Adaptor complexes medium subunit family
77822Exonuclease
1113Dipeptidyl peptidase IV (DPP IV) N-terminal region
11NB-ARC domain
15131745Glycosyl hydrolase family 3 N terminal domain
1113Ribosomal protein L44
11Sodium:sulfate symporter transmembrane region
1113DNA-dependent RNA polymerase
1113FAD binding domain in molybdopterin dehydrogenase
1113Glycosyl transferase family 4
1113HCO3- transporter family
2226Nucleosome assembly protein (NAP)
44412Synaptobrevin
1124GMP synthase C terminal domain
112Phage lysozyme
77822Adenosine/AMP deaminase
1051227Oxidoreductase FAD-binding domain
4149Thioesterase domain
2226Histidine biosynthesis protein
54413Glycosyltransferase family 20
2237UDP-glucose/GDP-mannose dehydrogenase family, central domain
2226Carbamoyl-phosphate synthase small chain, CPSase domain
1135PAS fold
11
2226Probable molybdopterin binding domain
44412Sec1 family
2226GDP dissociation inhibitor
52512Sodium/hydrogen exchanger family
2226RNA polymerase Rpb3/RpoA insert domain
55515Initiation factor 2 subunit family
112PQQ enzyme repeat
2125Electron transfer flavoprotein domain
1113Uricase
1113Ribosomal S3Ae family
1113Ribosomal L27 protein
1315GTP1/OBG
44412Gamma-glutamyltranspeptidase
11Ribosomal L40e family
1113GrpE
2237TatD related DNase
1113Inhibitor of apoptosis-promoting Bax1
1113Eukaryotic DNA topoisomerase I, catalytic core
2327Dynamin central region
32386-O-methylguanine DNA methyltransferase, DNA binding domain
11Bacteriorhodopsin-like protein
2226Carboxyl transferase domain
54716UbiA prenyltransferase family
115925Endoribonuclease L-PSP
134Phosphorylase superfamily
112Mannose-6-phosphate isomerase
87823Cys/Met metabolism PLP-dependent enzyme
74516Glycosyl hydrolases family 31
2114NADH ubiquinone oxidoreductase, 20 Kd subunit
101222ABC-2 type transporter
64717Amino-transferase class IV
65617CDP-alcohol phosphatidyltransferase
1113Calpain large subunit, domain III
43310ATP dependent DNA ligase domain
86721FMN-dependent dehydrogenase
1124Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
21253-beta hydroxysteroid dehydrogenase/isomerase family
1124Glycosyl hydrolases family 38 N-terminal domain
2226Nitrite and sulphite reductase 4Fe-4S domain
54615Cutinase
112Ribosomal protein S18
1113Clathrin light chain
1113Galactose-1-phosphate uridyl transferase, N-terminal domain
44412Ubiquitin carboxyl-terminal hydrolase, family 1
22
1113Ribosomal protein S19e
1113Ribosomal protein S6e
123Pectinesterase
44513Transcription factor S-II (TFIIS)
1113Surface antigen
44412emp24/gp25L/p24 family/GOLD
1113NifU-like domain
1113Cyclin-dependent kinase regulatory subunit
3339Asparaginase
1113F-actin capping protein, beta subunit
2237Fructose-bisphosphate aldolase class-II
2226Semialdehyde dehydrogenase, NAD binding domain
2237DNA mismatch repair protein, C-terminal domain
1113Dephospho-CoA kinase
1113MAPEG family
1113G10 protein
1113Succinate dehydrogenase/Fumarate reductase transmembrane subunit
1113DNA topoisomerase
1124Glucose inhibited division protein A
1124Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
2226RNA 3'-terminal phosphate cyclase
556163' exoribonuclease family, domain 1
1113tRNA pseudouridine synthase D (TruD)
2226Coenzyme A transferase
44412SPFH domain / Band 7 family
3339Cytidylyltransferase family
112Formamidopyrimidine-DNA glycosylase N-terminal domain
2226GDA1/CD39 (nucleoside phosphatase) family
3339GNS1/SUR4 family
1113Hydroxymethylglutaryl-coenzyme A synthase N terminal
33410Inosine-uridine preferring nucleoside hydrolase
1113Ribosomal protein L21e
1113Ribosomal protein L36e
1113Ribosomal protein L6e
3339Phosphatidylethanolamine-binding protein
1113
2226RIO1 family
1113Alanine racemase, N-terminal domain
1113Uncharacterized protein family UPF0016
112Putative RNA methylase family UPF0020
2226PP-loop family
1113Shwachman-Bodian-Diamond syndrome (SBDS) protein
1113SNO glutamine amidotransferase family
2226Translation initiation factor 1A / IF-1
2237Asp/Glu/Hydantoin racemase
3249Copper amine oxidase, enzyme domain
2226Dihydroorotate dehydrogenase
1113Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
1113Glycosyl hydrolases family 25
52411GPR1/FUN34/yaaH family
112Macrophage migration inhibitory factor (MIF)
44412
323816S rRNA methyltransferase RsmB/F
1113RNA polymerase Rpb5, C-terminal domain
1113RNA polymerase Rpb6
44412RNA polymerase Rpb3/Rpb11 dimerisation domain
1113RNA polymerases N / 8 kDa subunit
1113Peptidyl-tRNA hydrolase
112Ribosomal protein L17
1113Ribosomal protein L31e
1113Ribosomal protein L34e
1113Ribosomal protein S28e
2226Ribosomal protein S8e
41611Shikimate kinase
2226Trehalase
1225Uncharacterized protein family UPF0029
44412Dihydrouridine synthase (Dus)
1113Uroporphyrinogen decarboxylase (URO-D)
1416ubiE/COQ5 methyltransferase family
1113NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
235Beta-eliminating lyase
1124Adenylate cyclase associated (CAP) N terminal
2226Casein kinase II regulatory subunit
1113Cytochrome c oxidase subunit Vb
54514Clathrin adaptor complex small chain
1113Coproporphyrinogen III oxidase
1113Dehydroquinase class II
1113Dynein light chain type 1
33511Ergosterol biosynthesis ERG4/ERG24 family
1113DNA/RNA non-specific endonuclease
3115GTP cyclohydrolase I
53412HIT domain
2248Indoleamine 2,3-dioxygenase
1113Mannitol dehydrogenase Rossmann domain
1113Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain
54514Oxysterol-binding protein
2215Phosphomannose isomerase type I
2226Protein prenyltransferase alpha subunit repeat
45514Pyridoxamine 5'-phosphate oxidase
1236Membrane dipeptidase (Peptidase family M19)
112Ribosomal protein L19
2226Ribosomal protein L24e
1113Ribosomal protein L35Ae
55515Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
1113Ribosomal protein S21e
1113Ribosomal protein S7e
2226Translation initiation factor SUI1
1113Putative undecaprenyl diphosphate synthase
1113Carbohydrate kinase
1113Thioredoxin-like [2Fe-2S] ferredoxin
1113SAICAR synthetase
5139Xylose isomerase-like TIM barrel
2226Alanine dehydrogenase/PNT, C-terminal domain
3339Aldose 1-epimerase
1113Chorismate synthase
2215Cytochrome c/c1 heme lyase
3963681FAD dependent oxidoreductase
1113F-actin capping protein alpha subunit
1113Formate--tetrahydrofolate ligase
1124Fibrillarin
1113Malate synthase
1214Ribosomal protein L19e
1113Ribosomal protein S24e
1113Ribosomal protein S26e
112TEA/ATTS domain
1124Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold
11137,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
1113Phosphoenolpyruvate carboxykinase
112Ribosomal protein L13e
1113Telomere recombination
1113Glycosyl hydrolases family 35
44412CAP-Gly domain
1113
1113Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
112Creatinase/Prolidase N-terminal domain
44513DSBA-like thioredoxin domain
11Pyruvate phosphate dikinase, PEP/pyruvate binding domain
336Peroxidase, family 2
1113Pterin 4 alpha carbinolamine dehydratase
1113mRNA capping enzyme, catalytic domain
1061026OB-fold nucleic acid binding domain
1113Glycosyl hydrolases family 6
56617Kelch motif
1113Ribonuclease HII
112Pollen allergen
3232
11Tautomerase enzyme
55515FYVE zinc finger
11DHH family
44412Sec7 domain
3723776NAD dependent epimerase/dehydratase family
2226Porphobilinogen deaminase, dipyromethane cofactor binding domain
2226SIS domain
1113Helix-turn-helix
1113Phosphate transporter family
43310ARID/BRIGHT DNA binding domain
213Collagen triple helix repeat (20 copies)
1113Chromo shadow domain
1113Clathrin propeller repeat
88824JAB1/Mov34/MPN/PAD-1 ubiquitin protease
14121440PCI domain
2114tRNA synthetases class I (C) catalytic domain
16112148Oxidoreductase family, NAD-binding Rossmann fold
2226tRNA synthetases class II core domain (F)
2114tRNA synthetases class II (A)
55515Putative GTPase activating protein for Arf
2226tRNA pseudouridine synthase
2428ENTH domain
112Reprolysin (M12B) family zinc metalloprotease
2136NF-X1 type zinc finger
16161648LSM domain
3339R3H domain
29143376Amidase
53412BAH domain
1113AN1-like Zinc finger
42511Peptidase family M3
33410Peptidase family M1 domain
2226Peptidase family M41
2226Peptidase family M48
1214Thermolysin metallopeptidase, catalytic domain
1113Acetohydroxy acid isomeroreductase, catalytic domain
1113Low molecular weight phosphotyrosine protein phosphatase
112MAGE family
2226Eukaryotic porin
224Transglycosylase SLT domain
1113GRIP domain
1113Skp1 family, dimerisation domain
54514Cytidylyltransferase-like
1113Pyroglutamyl peptidase
3339PUA domain
1214Class-II DAHP synthetase family
1081836LysM domain
44412S4 domain
1214PWI domain
1113Proprotein convertase P-domain
1091029IBR domain, a half RING-finger domain
3339Type I 3-dehydroquinase
3339Shikimate / quinate 5-dehydrogenase
11101233Transmembrane amino acid transporter protein
1113Frataxin-like domain
1113GXGXG motif
2483163FAD binding domain
11
1113V-type ATPase 116kDa subunit family
2237Glycosyl transferase family 8
1113Phosphoribosyl-AMP cyclohydrolase
1113Phosphoribosyl-ATP pyrophosphohydrolase
3328Phosphatidylinositol-4-phosphate 5-Kinase
2226Phosphoadenosine phosphosulfate reductase family
2226TruB family pseudouridylate synthase (N terminal domain)
1113Respiratory-chain NADH dehydrogenase 51 Kd subunit
3339ATP-NAD kinase
2226Iron-sulphur cluster biosynthesis
64414Polysaccharide deacetylase
66618DHHC palmitoyltransferase
88824Glycosyl hydrolase family 47
76720PPR repeat
1113Adenosylmethionine decarboxylase
112GIY-YIG catalytic domain
44513CorA-like Mg2+ transporter protein
76821Cation efflux family
1181332Peptidase family M20/M25/M40
75618Acyltransferase
1124MatE
44412DnaJ C terminal domain
751022Fumarylacetoacetate (FAA) hydrolase family
1113Pyruvate ferredoxin/flavodoxin oxidoreductase
2125Spermine/spermidine synthase domain
402745112FAD binding domain
1113Natural resistance-associated macrophage protein
65617PAP2 superfamily
2226Aminomethyltransferase folate-binding domain
3339MaoC like domain
2226Adenylylsulphate kinase
67720G-patch domain
1113Putative tRNA binding domain
2338GAF domain
33396-phosphofructo-2-kinase
1113NifU-like N terminal domain
1041226Flavin containing amine oxidoreductase
1113Cyclin M transmembrane N-terminal domain
51410O-methyltransferase
1113Glycine cleavage H-protein
44513
1113Ribosomal protein S27a
88824Adaptin N terminal region
1113Protein phosphatase 2A regulatory B subunit (B56 family)
1113I/LWEQ domain
42393'-5' exonuclease
1113Flavin reductase like domain
2125Proline dehydrogenase
44412MutS domain I
1113Peptide methionine sulfoxide reductase
1113Hpt domain
3238Choline/ethanolamine kinase
1113ATP phosphoribosyltransferase
3137Phosphotransferase enzyme family
1113SelR domain
33410Chitin synthase
1113Conserved region in glutamate synthase
12254'-phosphopantetheinyl transferase superfamily
1113Peptidase C13 family
3339Eukaryotic initiation factor 4E
1113Ribosomal protein L32
1113Myo-inositol-1-phosphate synthase
1113Macro domain
3126Type I phosphodiesterase / nucleotide pyrophosphatase
1113Ribosomal protein S27
2136Glycosyl hydrolase family 12
1113Metalloenzyme superfamily
3339Proteolipid membrane potential modulator
1113SOR/SNZ family
1113Riboflavin kinase
3339Rhomboid family
8101331Sodium/calcium exchanger protein
2226Queuine tRNA-ribosyltransferase
2226UTP--glucose-1-phosphate uridylyltransferase
1113Transcriptional regulator
3339Smr domain
1113IPP transferase
3339Cobalamin-independent synthase, Catalytic domain
2338BolA-like protein
1124Ham1 family
11LexA DNA binding domain
34411FtsJ-like methyltransferase
1113Quinolinate phosphoribosyl transferase, C-terminal domain
11Arylesterase
1113Nucleoside transporter
671023Patatin-like phospholipase
3339Lysophospholipase catalytic domain
711119Dienelactone hydrolase family
55515STAS domain
1113Large-conductance mechanosensitive channel, MscL
1113Poly A polymerase head domain
112tRNA (Guanine-1)-methyltransferase
1113ATP-sulfurylase
1113Importin beta binding domain
1113Toprim domain
89926MYND finger
3339Acyltransferase family
2125Sodium Bile acid symporter family
11133-dehydroquinate synthase
43411Lipase (class 3)
11Ribosome recycling factor
1113Na+ dependent nucleoside transporter N-terminus
1113UreD urease accessory protein
1113Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A
1113Ribosomal L22e protein family
1113Ribosomal L27e protein family
1113Ribosomal L28e protein family
1113Ribosomal L29e protein family
1113Ribosomal L37ae protein family
1113Ribosomal L38e protein family
1113Ribosomal L32p protein family
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