PFAM Domains • Thozetella sp. PMI_491 v2.0
Annotations/GenomesChain1ConPMI546Conli1Conlig1Crypa2Maggr1Neucr2Ophpc1Phaal1ThoPMI491_1TotalAnnotation Description
PFAMs
9,3688,5048,9999,2468,5018,2018,0347,2977,65015,98491,784
1111267 transmembrane receptor (rhodopsin family)
1127 transmembrane receptor (Secretin family)
49414546555243394498512ATPase family associated with various cellular activities (AAA)
574854574450373347102529ABC transporter
444444434439ATP synthase alpha/beta family, nucleotide-binding domain
14141413141318131415142Elongation factor Tu GTP binding domain
121114151092012916128Helix-loop-helix DNA-binding domain
322223322526Hsp20/alpha crystallin family
8877878791180Hsp70 protein
81011119913810897KH domain
11111117SH2 domain
20232121202326211925219SH3 domain
999910911891093Actin
8550111887762534744241858Ankyrin repeat
322314111229PAN domain
778877976773ADP-ribosylation factor family
32222324271919132064263Eukaryotic aspartyl protease
444444644442Cyclic nucleotide-binding domain
11Cytochrome b(C-terminal)/b6/petD
11Cytochrome b/b6/petB
111111111110Cytochrome c
12211119Double-stranded RNA binding motif
21192018171818151821185EF hand
1121123221164Fe-4S binding domain
332222324326Fibronectin type III domain
222221222219Globin
111410910767931114Glutathione S-transferase, C-terminal domain
112111111111Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
9677577721067Homeodomain
243323422429lactate/malate dehydrogenase, NAD binding domain
555545555448Myosin head (motor domain)
1346795951161284141743531,144Cytochrome P450
139112120125116108134116861661,222Protein kinase domain
21181920161213132446202Pyridine nucleotide-disulphide oxidoreductase
27302729282628272233277Ras family
1314171714131791224150Response regulator receiver domain
233332231224RNase H
61606262485974575858599RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
112Retroviral aspartyl protease
1511210Reverse transcriptase (RNA-dependent DNA polymerase)
323221321221Copper/zinc superoxide dismutase (SODC)
212212332220Iron/manganese superoxide dismutases, alpha-hairpin domain
1319232810268122766232Subtilase family
123639896796438641452411,011Sugar (and other) transporter
1212131414911121115123Thioredoxin
1122141111226Trypsin
444444544542Tubulin/FtsZ family, GTPase domain
657622636952von Willebrand factor type A domain
50667177505464522598607Zinc finger, C2H2 type
38413640364042332444374Zinc finger, C3HC4 type (RING finger)
861064712107575Zinc knuckle
232322222323Protein-tyrosine phosphatase
1711171401411329666791613531,456short chain dehydrogenase
846573807555333773151726Zinc-binding dehydrogenase
555555556551Thiolase, N-terminal domain
2513202237331191051231Beta-ketoacyl synthase, N-terminal domain
6555446459532Fe-2S iron-sulfur cluster binding domain
122128Papain family cysteine protease
111111321113Enolase, C-terminal TIM barrel domain
123Cytochrome C and Quinol oxidase polypeptide I
22Cytochrome C oxidase subunit II, periplasmic domain
88997811971086Glutamine amidotransferase class-I
1010121010101010910101TCP-1/cpn60 chaperonin family
11ATP synthase A chain
444433533437Glutamine synthetase, catalytic domain
211122222318Triosephosphate isomerase
13141415141913112022155E1-E2 ATPase
88998810871085Core histone H2A/H2B/H3/H4
1124Copper binding proteins, plastocyanin/azurin family
81113141181041314106Alpha amylase, catalytic domain
322212222220Phorbol esters/diacylglycerol binding domain (C1 domain)
8987999981187Bacterial transferase hexapeptide (six repeats)
334444333435tRNA synthetases class I (I, L, M and V)
777776755563Cyclin, N-terminal domain
43181919332011121897290Carboxylesterase family
444444444440DNA polymerase family B
666646445653ATP synthase subunit C
8566676754197Peroxidase
1791111109661046135Beta-lactamase
333234213327C-5 cytosine-specific DNA methylase
35292932312332302240303Calcineurin-like phosphoesterase
151515151295121322133Cellulase (glycosyl hydrolase family 5)
878977879777tRNA synthetases class II (D, K and N)
38373638373840353343375Mitochondrial carrier protein
112recA bacterial DNA recombination protein
17161518171614151435177Aminotransferase class I and II
910999910771089Phosphoribosyl transferase domain
11101010101011101012104Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
111111111110Phosphoglycerate kinase
222222222220Ribosomal protein S4/S9 N-terminal domain
122222322220Ribosomal protein S12/S23
1111116Bacterial regulatory helix-turn-helix proteins, AraC family
111111111211Chaperonin 10 Kd subunit
12131213101614101414128C2 domain
18191816191628171217180PH domain
14101097119871297bZIP transcription factor
31182321191816203065261Aldehyde dehydrogenase family
191215176288166108139202317242,240Fungal Zn(2)-Cys(6) binuclear cluster domain
21242524202223212141242Cytochrome b5-like Heme/Steroid binding domain
23333413426Oxidoreductase molybdopterin binding domain
16141517181915131227166Oxidoreductase NAD-binding domain
24222926292428182135256SNF2 family N-terminal domain
121212212216Ribosomal protein S7p/S5e
21232222201920191923208Ubiquitin-conjugating enzyme
1175787779977Isocitrate/isopropylmalate dehydrogenase
222222222220Ribosomal Proteins L2, RNA binding domain
111111111110Hsp90 protein
222222222220Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
111111111110Dihydrofolate reductase
6536213222766Chitin recognition protein
2344363331142Cysteine-rich secretory protein family
111111111110Ribosomal protein S3, C-terminal domain
675432114841Cupin
122212323321Annexin
2221211112Eukaryotic-type carbonic anhydrase
112212111113Chalcone and stilbene synthases, N-terminal domain
4333333334322-oxoacid dehydrogenases acyltransferase (catalytic domain)
766642337549Catalase
12221211113Disintegrin
33221511927UDP-glucoronosyl and UDP-glucosyl transferase
667686910102290Aminotransferase class-III
222222222220Ribosomal protein S19
111111211111DNA gyrase B
7776646461265Thiamine pyrophosphate enzyme, central domain
335533334537Lyase
222222222220Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
33Sodium:neurotransmitter symporter family
111111211111Adenylate and Guanylate cyclase catalytic domain
111111111211ATP synthase delta (OSCP) subunit
112111111111Orotidine 5'-phosphate decarboxylase / HUMPS family
111111211111Indole-3-glycerol phosphate synthase
1111127Aromatic amino acid lyase
111211211213Pyruvate kinase, barrel domain
1110171291013101012114Kinesin motor domain
27252829242633292529275DnaJ domain
14141414141416141514143Proteasome subunit
265666123542Major intrinsic protein
111111111110ATP synthase
133332214830Glycosyl hydrolase family 1
111111211103'5'-cyclic nucleotide phosphodiesterase
111111212112Profilin
111111111110Ribosomal protein L22p/L17e
222222222220Ribosomal protein L14p/L23e
131416131110146814119Ubiquitin family
555545654549Cofilin/tropomyosin-type actin-binding protein
22222232222114-3-3 protein
344426734744Alkaline phosphatase
1322111215432Zinc carboxypeptidase
51263536442319266088408Aldo/keto reductase family
1415151511152014819146Myb-like DNA-binding domain
444434432436Forkhead domain
154515212531Glycosyl hydrolases family 32 N-terminal domain
1111111119Ribosomal protein L16p/L10e
12122221215Ribosomal protein S14p/S29e
444623433538FKBP-type peptidyl-prolyl cis-trans isomerase
111111111110Glutathione peroxidase
212212222117
9698996861181Flavodoxin
11Tropomyosin
114311111115Calreticulin family
1114111151493840126Common central domain of tyrosinase
9889778961586Aminotransferase class-V
111111111110Ribonucleotide reductase, small chain
38394342384141353543395DEAD/DEAH box helicase
74778081777680666788766Helicase conserved C-terminal domain
111111111211EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
211122222116Ribosomal protein L23
111111111110Pyridoxal-dependent decarboxylase, C-terminal sheet domain
122212211216Ribosomal protein L5
577875656864Pyridoxal-dependent decarboxylase conserved domain
232242422326Citrate synthase, C-terminal domain
554555655550GHMP kinases N terminal domain
657766666863Biotin carboxylase, N-terminal domain
111111111110Tryptophan synthase alpha chain
91089101211101016105Pyridoxal-phosphate dependent enzyme
18171617151418111427167NUDIX domain
546655975759pfkB family carbohydrate kinase
12101010213241021103Glycosyl hydrolases family 28
21111422822Luciferase-like monooxygenase
222222222220Ribosomal protein L3
222222222220Ribosomal protein L11, RNA binding domain
1412121311111211715118Histidine phosphatase superfamily (branch 1)
22Chloramphenicol acetyltransferase
111111111110Thymidylate synthase
11111111311Lipoxygenase
444444434439ATP synthase alpha/beta chain, C terminal domain
555555854451Calponin homology (CH) domain
464455544647Glutamine amidotransferases class-II
222222222220Ribosomal protein S15
1111111119Thaumatin family
222222221219Fructose-1-6-bisphosphatase, N-terminal domain
111111111110Ribonucleotide reductase, all-alpha domain
222222222220Ribosomal protein S2
222122222320SRF-type transcription factor (DNA-binding and dimerisation domain)
6888591074974GATA zinc finger
32303638382922414686398Amino acid permease
7455563451256Prolyl oligopeptidase family
222222222220Ribosomal protein L30p/L7e
999991271291297Histidine phosphatase superfamily (branch 2)
111111111110Respiratory-chain NADH dehydrogenase, 30 Kd subunit
866655445958Aconitase family (aconitate hydratase)
377746415852Glycosyl hydrolase family 10
344442534437Glycosyl hydrolases family 17
212222222219Ribosomal protein S5, N-terminal domain
1111111119Nucleoside diphosphate kinase
11Tetraspanin family
212221111114Ribosomal protein S10p/S20e
454445433440Arrestin (or S-antigen), N-terminal domain
1111111119Phosphoglucose isomerase
111111111110Carbohydrate phosphorylase
111111111110SecY translocase
111111111110Respiratory-chain NADH dehydrogenase, 49 Kd subunit
222222221219Ribosomal protein L6
333439333539Polyprenyl synthetase
444444455442Hexokinase
9101197117671693Dynamin family
111111121111Transcription factor TFIID (or TATA-binding protein, TBP)
345545445847Rieske [2Fe-2S] domain
112Phytochrome region
8799888881184Biotin-requiring enzyme
111111111110Phosphofructokinase
222222221219Ribosomal protein S17
111111111110Hydroxymethylglutaryl-coenzyme A reductase
244434343334FGGY family of carbohydrate kinases, N-terminal domain
112Sodium:dicarboxylate symporter family
13121213138791019116Enoyl-CoA hydratase/isomerase
222222212320Ribosomal protein S9/S16
322222322222Transcription factor TFIIB repeat
9889979791287Cytidine and deoxycytidylate deaminase zinc-binding region
111212111112Molybdopterin oxidoreductase
9611116111265784Chromo (CHRromatin Organisation MOdifier) domain
344455444441Phosphatidylinositol-specific phospholipase C, Y domain
344465656447Phosphatidylinositol-specific phospholipase C, X domain
136991186111124108D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
222222322221Malic enzyme, N-terminal domain
112PEP-utilising enzyme, mobile domain
1111212111126-phosphogluconate dehydrogenase, C-terminal domain
16151618161610111038166Multicopper oxidase
11Granulin
910121269910101198WW domain
111111111110Ribosomal RNA adenine dimethylase
111111118Yeast PIR protein repeat
112109104111104104114108911331,090WD domain, G-beta repeat
546845554450Heavy-metal-associated domain
343333433332Adenylate kinase
122212112216Phosphoglucomutase/phosphomannomutase, C-terminal domain
222212322220Ribosomal protein S8
111112111111Ribosomal protein S11
444344552439LIM domain
123Matrixin
233323222224Regulator of chromosome condensation (RCC1) repeat
222222222220Ribosomal protein S13/S18
223322322223chorismate binding enzyme
33333343333160s Acidic ribosomal protein
11CUB domain
545545443746Prenyltransferase and squalene oxidase repeat
755567836860Protein kinase C terminal domain
111111211111Single-strand binding protein family
111111211111S-adenosylmethionine synthetase, N-terminal domain
977788877876Bromodomain
1091091489131218112Acyl-CoA dehydrogenase, C-terminal domain
14141414131417151315143Ubiquitin carboxyl-terminal hydrolase
111115Ribosomal protein L36
22223213522Ribonuclease T2 family
333333323228HSF-type DNA-binding
222222222220SRP54-type protein, GTPase domain
111111211111Urease alpha-subunit, N-terminal domain
16151615116431237135Serine carboxypeptidase
888888888981Phosphatidylinositol 3- and 4-kinase
413432134429Transketolase, thiamine diphosphate binding domain
367645212743Glycosyl hydrolases family 11
445443543541Inositol monophosphatase family
444434544541Glutaredoxin
5443323351042Isocitrate lyase family
222222321220Serine hydroxymethyltransferase
555531122635Iron-containing alcohol dehydrogenase
122222322220Ribosomal protein L10
244435453236KOW motif
111111118Ribosomal protein L34
222232332324RF-1 domain
425353232837Sodium:solute symporter family
111111111110Imidazoleglycerol-phosphate dehydratase
111111111110DNA polymerase family A
111111111110IMP dehydrogenase / GMP reductase domain
111111111110Glucose-6-phosphate dehydrogenase, NAD binding domain
755665755758Protein phosphatase 2C
222222222220Nucleotidyl transferase
3655243351349Carbonic anhydrase
111111111110Phosphoribulokinase / Uridine kinase family
6576655671164Fatty acid desaturase
666666665659MutS domain V
111111111110Delta-aminolevulinic acid dehydratase
444444559952Arginase family
666666666660MCM P-loop domain
122221311116Squalene/phytoene synthase
11Bacterial extracellular solute-binding proteins, family 5 Middle
11Bacterial extracellular solute-binding proteins, family 3
1010978910881190FHA domain
44373837474828273395434AMP-binding enzyme
333333433634G-protein alpha subunit
98767101586884HMG (high mobility group) box
111114141110136920119His Kinase A (phospho-acceptor) domain
222222332222Armadillo/beta-catenin-like repeat
30242828232726271939271Tetratricopeptide repeat
444442333435Ion transport protein
111111211111DNA gyrase/topoisomerase IV, subunit A
10999810107101193BRCA1 C Terminus (BRCT) domain
8999869661080Glycosyl transferases group 1
565432445543Glycosyl transferase family 2
1111131211SAM domain (Sterile alpha motif)
111111211111linker histone H1 and H5 family
111111111110Ribosomal protein L7/L12 C-terminal domain
232123316Pectate lyase
11111222213ribonuclease
111111211111Urease, gamma subunit
444454444441CoA-ligase
321712133027881053210Phosphopantetheine attachment site
233342333430Formyl transferase
118999810971292Metallopeptidase family M24
1514171712131916814145Leucine Rich Repeat
623542424140242928139482alpha/beta hydrolase fold
333333333330RNA polymerase Rpb2, domain 6
444444444440PB1 domain
222222222220Staphylococcal nuclease homologue
101010109910991096Rab-GTPase-TBC domain
111111111110Tudor domain
1111111119WH1 domain
445544442541Zinc finger, ZZ type
111122112113HRDC domain
101098910118101196CBS domain
222222322221Ribosomal protein L13
222222322221Ribosomal protein L4/L1 family
111111111110Clp protease
554415544542S1 RNA binding domain
211111311113HIUase/Transthyretin family
444443324436AhpC/TSA family
444444444440tRNA synthetases class I (W and Y)
11111211211UvrD/REP helicase N-terminal domain
255545445847Rhodanese-like domain
222222522223Universal stress protein family
544340424333312538105454Acetyltransferase (GNAT) family
111111111110SecE/Sec61-gamma subunits of protein translocation complex
111111211111C-terminal regulatory domain of Threonine dehydratase
222222222321AIR synthase related protein, N-terminal domain
1099988101010992tRNA synthetase class II core domain (G, H, P, S and T)
1111111119SpoU rRNA Methylase family
11Phage integrase family
222222222220Tetrapyrrole (Corrin/Porphyrin) Methylases
111111111110Glycosyl transferase family, a/b domain
111115PDZ domain
9867552772278Class II Aldolase and Adducin N-terminal domain
444434543439Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
544544445443Fes/CIP4, and EFC/F-BAR homology domain
556545845451IQ calmodulin-binding motif
222222222220Phosphoinositide 3-kinase family, accessory domain (PIK domain)
666656655556Phospholipase D Active site motif
211121211214Regulator of G protein signaling domain
444444743442GTPase-activator protein for Ras-like GTPase
444444644442RasGEF domain
444444643441RasGEF N-terminal motif
899998151071094RhoGAP domain
676646755961RhoGEF domain
433333343534SPRY domain
333333333330RNA polymerase Rpb1, domain 2
22222211317Guanylate kinase
554445455647Gelsolin repeat
98107581077677UBA/TS-N domain
16151717111518141218153PHD-finger
111111111110GGL domain
6666661065663HECT-domain (ubiquitin-transferase)
21331121216Helix-hairpin-helix motif
111111111110MSP (Major sperm protein) domain
44